Modomics - A Database of RNA Modifications

ID Card:

Full name: Putative C->U-editing enzyme APOBEC-4
GI: 74751569
UniProt: Q8WW27
Alpha Fold Predicted Structure: AF-Q8WW27-F1
Enzyme type: deaminase



Protein sequence:

MEPIYEEYLANHGTIVKPYYWLSFSLDCSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFYELKTSSGSLVQKGHASSCTGNYIHPESMLFEMNGYLDSAIYNNDSIRHIILYSNNSPCNEANHCCISKMYNFLITYPGITLSIYFSQLYHTEMDFPASAWNREALRSLASLWPRVVLSPISGGIWHSVLHSFISGVSGSHVFQPILTGRALADRHNAYEINAITGVKPYFTDVLLQTKRNPNTKAQEALESYPLNNAFPGQFFQMPSGQLQPNLPPDLRAPVVFVLVPLRDLPPMHMGQNPNKPRNIVRHLNMPQMSFQETKDLGRLPTGRSVEIVEITEQFASSKEADEKKKKKGKK

Comments:





Alpha Fold Predicted Structure:






Clear Selection and Reset Camera

Protein sequence:

M E P I Y E E Y L A N H G T I V K P Y Y W L S F S L D C S N C P Y H I R T G E E A R V S L T E F C Q I F G F P Y G T T F P Q T K H L T F Y E L K T S S G S L V Q K G H A S S C T G N Y I H P E S M L F E M N G Y L D S A I Y N N D S I R H I I L Y S N N S P C N E A N H C C I S K M Y N F L I T Y P G I T L S I Y F S Q L Y H T E M D F P A S A W N R E A L R S L A S L W P R V V L S P I S G G I W H S V L H S F I S G V S G S H V F Q P I L T G R A L A D R H N A Y E I N A I T G V K P Y F T D V L L Q T K R N P N T K A Q E A L E S Y P L N N A F P G Q F F Q M P S G Q L Q P N L P P D L R A P V V F V L V P L R D L P P M H M G Q N P N K P R N I V R H L N M P Q M S F Q E T K D L G R L P T G R S V E I V E I T E Q F A S S K E A D E K K K K K G K K

Secondary Structure Alphabet

  • G: 3-turn helix (310helix)
  • H: α-helix
  • I: 𝝅-helix (5 - turn helix)
  • T: Hydrogen Bonded Turn
  • B: β-sheet
  • S: Bend
  • C: Coil (residues not present in any of the above conformations)
  • N: Not assigned

Download PDB Structures & DSSP Secondary Structures:

Alpha Fold Pdb Files   AF-Q8WW27-F1.pdb  
Alpha Fold Pdbx/mmCIF Files   AF-Q8WW27-F1.cif  
DSSP Secondary Structures   Q8WW27.dssp  





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