General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000466624
Gene ID:	ENSG00000063660
Gene Name:	GPC1
Sequence (UNICHARACTER ENCODING)	GGUGGAGGUGGACAUCACCAAGCCGGACAUGACCAUCCGGCAGCAGAUCAUGCAGCUGAAGAUCAUGACCAACCGGCUGCGCAGCGCCUACAACGGCAACGACGUGGACUUCCAGGACGCCAGUGACGACGGCAGCGGCUCGGGCAGCGGUGAUGGCUGUCUGGAUGACCUCUGCAGCCGGAAGGUCAGCAGGAAGAGCUCCAGCUCCCGGACGCCCUUGACCCAUGCCCUCCCAGGCCUGUCAGAGCAGGAAGGЖCAGAAGACCUCGGCUGCCAGCUGCCCCCAGCCCCCGACCUUCCUCCUGCCCCUCCUCCUCUUCCUGGCCCUUACЖGUAGCCAGGCCCCGGUGGCGGUAЖCUGCCCCAAGGCCCCAGGGЖCAGAGGCCAAGGЖCUGЖCUUUGCCAAAAAUACAACACAGЖCGAUAUUUAAUUCACCUCAGCCUGGCCUCGCCUGCCUUUCUGCCUUUUAAUUUUGUAUGAGGUCCUCAGGUCAGCUGGGAGCCAGUGUGCCCAAAAGCCAUGUAUUUCAGGGЖCCUCAGGGGCACCUCCGGCUGCCUAGCCCUCCCCCCAGCUCCCUGCACCGCCGCAGAAGCAGCCCCUCGAGGCCUACAGAGGAGGCCUCAAAGCAACCCGCUGGAGCCCACAGCGAGCCUGUGCCUUCCUCCCCGCCUCCUCCCACUGGGЖCUCCCAGCAGAGCCCACCAGCCAGCCCUGGCCCACCCCCCAGCCUCCAGAGAAGCCCCGCACGGGCUGUCUGGGUGUCCGCCAUCCAGGGUCUGGCAGAGCCU
Sequence (SHORT NAMES ENCODING)	GGUGGAGGUGGACAUCACCAAGCCGGACAUGACCAUCCGGCAGCAGAUCAUGCAGCUGAAGAUCAUGACCAACCGGCUGCGCAGCGCCUACAACGGCAACGACGUGGACUUCCAGGACGCCAGUGACGACGGCAGCGGCUCGGGCAGCGGUGAUGGCUGUCUGGAUGACCUCUGCAGCCGGAAGGUCAGCAGGAAGAGCUCCAGCUCCCGGACGCCCUUGACCCAUGCCCUCCCAGGCCUGUCAGAGCAGGAAGGm6ACAGAAGACCUCGGCUGCCAGCUGCCCCCAGCCCCCGACCUUCCUCCUGCCCCUCCUCCUCUUCCUGGCCCUUACm6AGUAGCCAGGCCCCGGUGGCGGUAm6ACUGCCCCAAGGCCCCAGGGm6ACAGAGGCCAAGGm6ACUGm6ACUUUGCCAAAAAUACAACACAGm6ACGAUAUUUAAUUCACCUCAGCCUGGCCUCGCCUGCCUUUCUGCCUUUUAAUUUUGUAUGAGGUCCUCAGGUCAGCUGGGAGCCAGUGUGCCCAAAAGCCAUGUAUUUCAGGGm6ACCUCAGGGGCACCUCCGGCUGCCUAGCCCUCCCCCCAGCUCCCUGCACCGCCGCAGAAGCAGCCCCUCGAGGCCUACAGAGGAGGCCUCAAAGCAACCCGCUGGAGCCCACAGCGAGCCUGUGCCUUCCUCCCCGCCUCCUCCCACUGGGm6ACUCCCAGCAGAGCCCACCAGCCAGCCCUGGCCCACCCCCCAGCCUCCAGAGAAGCCCCGCACGGGCUGUCUGGGUGUCCGCCAUCCAGGGUCUGGCAGAGCCU
Sequence (MODOMICS CODE ENCODING)	GGUGGAGGUGGACAUCACCAAGCCGGACAUGACCAUCCGGCAGCAGAUCAUGCAGCUGAAGAUCAUGACCAACCGGCUGCGCAGCGCCUACAACGGCAACGACGUGGACUUCCAGGACGCCAGUGACGACGGCAGCGGCUCGGGCAGCGGUGAUGGCUGUCUGGAUGACCUCUGCAGCCGGAAGGUCAGCAGGAAGAGCUCCAGCUCCCGGACGCCCUUGACCCAUGCCCUCCCAGGCCUGUCAGAGCAGGAAGG2000000006ACAGAAGACCUCGGCUGCCAGCUGCCCCCAGCCCCCGACCUUCCUCCUGCCCCUCCUCCUCUUCCUGGCCCUUAC2000000006AGUAGCCAGGCCCCGGUGGCGGUA2000000006ACUGCCCCAAGGCCCCAGGG2000000006ACAGAGGCCAAGG2000000006ACUG2000000006ACUUUGCCAAAAAUACAACACAG2000000006ACGAUAUUUAAUUCACCUCAGCCUGGCCUCGCCUGCCUUUCUGCCUUUUAAUUUUGUAUGAGGUCCUCAGGUCAGCUGGGAGCCAGUGUGCCCAAAAGCCAUGUAUUUCAGGG2000000006ACCUCAGGGGCACCUCCGGCUGCCUAGCCCUCCCCCCAGCUCCCUGCACCGCCGCAGAAGCAGCCCCUCGAGGCCUACAGAGGAGGCCUCAAAGCAACCCGCUGGAGCCCACAGCGAGCCUGUGCCUUCCUCCCCGCCUCCUCCCACUGGG2000000006ACUCCCAGCAGAGCCCACCAGCCAGCCCUGGCCCACCCCCCAGCCUCCAGAGAAGCCCCGCACGGGCUGUCUGGGUGUCCGCCAUCCAGGGUCUGGCAGAGCCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	256	331	355	375	388	392	415	528	679
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	2:240466191:+	2:240466266:+	2:240466290:+	2:240466310:+	2:240466323:+	2:240466327:+	2:240466350:+	2:240466539:+	2:240466690:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	NjZ8bGGJsNSR VL7zkHvkfkoB WdHxkJGRmFxn BkoLW2CBToyL BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8