General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000692379
Gene ID:	ENSG00000227946
Gene Name:	INO80D-AS1
Sequence (UNICHARACTER ENCODING)	UCCUUCCCCCCUGUUCCCUCGGCUGGGCUGACAGAUCAGAGUGAGAGGCGCUGGCAAUGGЖCUAGGAAGCUCGGCUGCCGCUGCUACUGCUCCCCCCUGGGCUCCGGCGAGAGCCUUUCCCUGUCAAGCAAGAGGGGUGAGGAUCAUAUUUUUAUUUUGGAAACUAAAAAGUGCUCCCAGGGUCGGUGAUUAUUAAGGGGAAAUCCCUGAAUAUACUCUCCAGCCAAGAAGGCAGGGCUGCCGGGGCUGUACAAGAAGAGGCAGCAGCCUCCUACAGCACCACUACAGGCACUGCGAGGЖCAUAACACCAGAGAGCUGCUCCUCUGCCCUCCGAAACGACAЖCUUUCCUACCAUCUUGGAGGCAGAGCAAAGGGGGGCCAGGGGGAAAAGUGCACCCGCUCCCGAUAAAGUACAAAUUUUUACUUCUCAUCUCUGGAAAAAAGUCCACACCGGCCGUCUACACCCGCGCCUGGGGGAGAAAGCAGGGAAGAAACGGGGGGUGCAUGAGAAЖCGUUUUCAUUUGCUCCAGGGGGAAAAAUGUUUCUGCAUCUUCUGAUGGAAAGAAAUCUUUACAAGACACAGGUUUUCCGGUGGUUAUUGUUUUUUAUUUUCUGUUUUUAAUUUUUUUCAUGUUAGUGACAGUGAUAUUUUAAUAUUUUUUUAAGCCAGUAAUAAUUUUUCUCCAUUACAGGGCUAAGUUCUGUGGCUGGUGGUCAGUUUGUAAAUUUAUACUUAAAGAGЖCUUAAUAGUAACUUCAUUUAUUUGUCUGGUUAUGUUAUUGUAUAUAUAAAUAUUUAUGUUUUCAUAUAUUGCAUAUAAAAAUUUGUGUUACAUGUUACUCUCAGAACAGAUUGCUGUAAGACAAUUGUAAAAAAACAUGUCUUUCGUCUGUUUCUCAAAGCAAUGUAAAUAAAACCUAUGGACUGUCCAGAAAGGCAUGA
Sequence (SHORT NAMES ENCODING)	UCCUUCCCCCCUGUUCCCUCGGCUGGGCUGACAGAUCAGAGUGAGAGGCGCUGGCAAUGGm6ACUAGGAAGCUCGGCUGCCGCUGCUACUGCUCCCCCCUGGGCUCCGGCGAGAGCCUUUCCCUGUCAAGCAAGAGGGGUGAGGAUCAUAUUUUUAUUUUGGAAACUAAAAAGUGCUCCCAGGGUCGGUGAUUAUUAAGGGGAAAUCCCUGAAUAUACUCUCCAGCCAAGAAGGCAGGGCUGCCGGGGCUGUACAAGAAGAGGCAGCAGCCUCCUACAGCACCACUACAGGCACUGCGAGGm6ACAUAACACCAGAGAGCUGCUCCUCUGCCCUCCGAAACGACAm6ACUUUCCUACCAUCUUGGAGGCAGAGCAAAGGGGGGCCAGGGGGAAAAGUGCACCCGCUCCCGAUAAAGUACAAAUUUUUACUUCUCAUCUCUGGAAAAAAGUCCACACCGGCCGUCUACACCCGCGCCUGGGGGAGAAAGCAGGGAAGAAACGGGGGGUGCAUGAGAAm6ACGUUUUCAUUUGCUCCAGGGGGAAAAAUGUUUCUGCAUCUUCUGAUGGAAAGAAAUCUUUACAAGACACAGGUUUUCCGGUGGUUAUUGUUUUUUAUUUUCUGUUUUUAAUUUUUUUCAUGUUAGUGACAGUGAUAUUUUAAUAUUUUUUUAAGCCAGUAAUAAUUUUUCUCCAUUACAGGGCUAAGUUCUGUGGCUGGUGGUCAGUUUGUAAAUUUAUACUUAAAGAGm6ACUUAAUAGUAACUUCAUUUAUUUGUCUGGUUAUGUUAUUGUAUAUAUAAAUAUUUAUGUUUUCAUAUAUUGCAUAUAAAAAUUUGUGUUACAUGUUACUCUCAGAACAGAUUGCUGUAAGACAAUUGUAAAAAAACAUGUCUUUCGUCUGUUUCUCAAAGCAAUGUAAAUAAAACCUAUGGACUGUCCAGAAAGGCAUGA
Sequence (MODOMICS CODE ENCODING)	UCCUUCCCCCCUGUUCCCUCGGCUGGGCUGACAGAUCAGAGUGAGAGGCGCUGGCAAUGG2000000006ACUAGGAAGCUCGGCUGCCGCUGCUACUGCUCCCCCCUGGGCUCCGGCGAGAGCCUUUCCCUGUCAAGCAAGAGGGGUGAGGAUCAUAUUUUUAUUUUGGAAACUAAAAAGUGCUCCCAGGGUCGGUGAUUAUUAAGGGGAAAUCCCUGAAUAUACUCUCCAGCCAAGAAGGCAGGGCUGCCGGGGCUGUACAAGAAGAGGCAGCAGCCUCCUACAGCACCACUACAGGCACUGCGAGG2000000006ACAUAACACCAGAGAGCUGCUCCUCUGCCCUCCGAAACGACA2000000006ACUUUCCUACCAUCUUGGAGGCAGAGCAAAGGGGGGCCAGGGGGAAAAGUGCACCCGCUCCCGAUAAAGUACAAAUUUUUACUUCUCAUCUCUGGAAAAAAGUCCACACCGGCCGUCUACACCCGCGCCUGGGGGAGAAAGCAGGGAAGAAACGGGGGGUGCAUGAGAA2000000006ACGUUUUCAUUUGCUCCAGGGGGAAAAAUGUUUCUGCAUCUUCUGAUGGAAAGAAAUCUUUACAAGACACAGGUUUUCCGGUGGUUAUUGUUUUUUAUUUUCUGUUUUUAAUUUUUUUCAUGUUAGUGACAGUGAUAUUUUAAUAUUUUUUUAAGCCAGUAAUAAUUUUUCUCCAUUACAGGGCUAAGUUCUGUGGCUGGUGGUCAGUUUGUAAAUUUAUACUUAAAGAG2000000006ACUUAAUAGUAACUUCAUUUAUUUGUCUGGUUAUGUUAUUGUAUAUAUAAAUAUUUAUGUUUUCAUAUAUUGCAUAUAAAAAUUUGUGUUACAUGUUACUCUCAGAACAGAUUGCUGUAAGACAAUUGUAAAAAAACAUGUCUUUCGUCUGUUUCUCAAAGCAAUGUAAAUAAAACCUAUGGACUGUCCAGAAAGGCAUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	61	300	342	511	741
Modification Positions	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	2:206085983:+	2:206086222:+	2:206086264:+	2:206086433:+	2:206086663:+
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5Nnepx5V7yHo 6UuHp6YApVKv Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL Yfn77uLS5tv8	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VyCX26p5UBRL	ArijeGVTwYBw Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8