General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000464559
Gene ID:	ENSG00000125637
Gene Name:	PSD4
Sequence (UNICHARACTER ENCODING)	UCUUUAUUGAUAAGAAAUGCCACGGUCAGAGGUCGGGUGCCCGGCUAGUGGCAGGGCUGUAACUAUGGGAGGCUGAGUUCUGAGCAGCUGGCCAGCUGUGCAAGCAGCCACAGGAGGGGGCGGGAGGAGGGUGACAGGACGGACUCUGUGUCCCCGGGGACCAACGACCUCCUUUGCCCCAGCACUGCCAAGGAGAUGAGCUCCUGGAUCGCGCGCAUCAACUUGGCUGCGGCCACGCACUCCGCGCCGCCCUUCCCCGCCGCUGUGGGCUCCCAGCGCAGAUUCGUGCGGCCCAUCCUGCCCGUGGGCCCCGCCCAGAGCUCCCUGGUACGGCCUCCGGGAAGGGGUGGGGUCCGGCGGAACUGGGAAUGUGCACCUGGAGCCCCAGGACUAACUCGGGGAGGCUGGAGGCGGGCUGCGCACUUGGCCUGGGAACCGAGGCGGCCAGGGGGGCGGCGCGCCCGGGCCCGGAAAGCGGCGGAGGGGACGCCCGGGACAGCGCCCCUCACCGCCCGCUGCUCGCAGGAGGAGCAGCAUCGAUCCCACGAGAACUGCCUGGACGCUGCCGCGGACGACCUGCUGGAUCUACAGAGGAACCUGCCGGAGCGGCGGGGCCGUGGCCGCGAGCUGGAGGAGCACCGCCUGCGGAAGGAGUACCUGGAGUACGAGAAAACCCGCUACGAGACCUACGUGCAGCUGCUGGUGGCCCGCCUGCACUGCCCCUCUGAUGCUCUGGЖCCUGUGGGAGGAGCAGCUGGGGAGGGAAGCUGGAGGCACUCGGGAGCCCAAGCUCAGCCUGAAGAAGUCCCACUCGAGCCCGUCCCUGCACCAGGAUGAGGCUCCCACCACGGCCAAGGUGAAGCGCAACAUCUCAGAGCGCAGAACCUACCGGAAGAUCAUCCCUAAGCGGAACCGCAAUCAGCUGUGAAGCCAGCACCACCUCAGAGЖCACUGUUCCCUGCUCCAGGGUAGACCUGAGAUGAACCUCCCUGGAGGAGЖCUUAUUUCAAUGAGUCCACCAUGACGGAUGAGGCACCUCCUUUCCCUGCUGAAGGЖCAAACCUUGUUUCCCUGUGGCCCUCAUUCUUGUGCUCCCUGAAGCUUUCCUAAUAUUGCUGUGCUCCCCACCACCCCCAUGGCAGUCCCUCCGCAGCCCCAGUCCCUGGCCACGCCCAAGGGAAGAGGGAGGUGAGGЖCUUGACUUUCCUCCCAGAGCUCAGCCCAUGUCACCCUCCAGGCCCCAGAAUCCAGAGUGGCCUCAUUUCCUAGЖCUUGCUGAGAЖCUCAGCACUUGUUUGAGAACCAGUGCUUAUGUGGUGUGCCCUUGGCUUCUGGGGGAGAGCUUGGGGCAGCAGAGGCCCCUGGGCAGCCCAGCCAGGGGAGCCACAGCCCCAAGGAUGGUCUUGCUCUGGGAAUUAGGUGACCUUCCUGGGGAGGCCCCAGGAGAGUGAAUCAGGGЖCUCUUGAGAAAUUCCUAACCAGCCUCCUGUGACCCAGGGAGCAGGGUCGCUAAGGUCCUGCCCACUGAGGGGACAGCCUUCUGGGCAGGGACCUCGGGGGGCUUCAAGGGCUCUGCACGGCUGUGGGGCCCUGUGCCUUUGUCUCCUUGUGUCUCCUUUCCCCCGAAGUAGAUGAAACAGUCUCACAUACCCAACUGCUCAUCAACAGAGCAGAGCUGAUGGCAUGAGUGAGGGCUGGGCGGGGUGGGGCCUCCAGAGCUUUGCAGGGAACCCUGGAACCCUAGGAACAAGGAGCCUUUGUUCCAACAGAGCAGAGAAGGAGGUUCUCUAUGUUCAGACCACUGGAGAGGAUAGAGAGGUAAAAGGUGGCGACAGUUUCCCUUAGGGGUCUGCCUGGCAGGAGCCACAGCUCAGGAGAGUUGUGAGGGAUGGGACGGAGGCUGGCGACCAGGCGAGGCCUAGGCCAGGCUCGGGAGACUUUUCUGUGCUCCUUUCUACACAUGCCUUAAACCUUCCUUCCUGUGGGGUGCCUGGACCCCUUCCCCAUCUCUGGCAGCUCAGAGGGUCUCUGCUGCUCUCCCCUGGGAAAUCCCCUCAUCCUGCCCUCUGGCUGCCUCCCAGCUGGGCUUGUUCUCUGAGGGAGGUUCCGGAGACUCAUGGЖCUUGGGGCUCUGCCUGUAGGAAGGAGGCUGGGCCGGAGGGACCAGCCACCAUUGUCUCUGUUCAGCCAAGUGUGCAAGUAGGCUGCCCGCCAAGAGGGGGCCUCUGCUACCCGCUGCUGCCUGCCGGCUGACACACUGCCUCCCCAGCCUUCCUGCUAGGCCACCCUCCUCCCUUCCCAUGCUUGUAACCAGCUCUGGGGCUUGCACCUCCACAAAGUAAGGUUGGCCCUUGGAGGCCAUGUUUGGGUCUCCGGCCAGGGCCUAGGGCUAGGCCAUGCACCCAAUGGGUGCACAAUAAAUAACAGGUCAAC
Sequence (SHORT NAMES ENCODING)	UCUUUAUUGAUAAGAAAUGCCACGGUCAGAGGUCGGGUGCCCGGCUAGUGGCAGGGCUGUAACUAUGGGAGGCUGAGUUCUGAGCAGCUGGCCAGCUGUGCAAGCAGCCACAGGAGGGGGCGGGAGGAGGGUGACAGGACGGACUCUGUGUCCCCGGGGACCAACGACCUCCUUUGCCCCAGCACUGCCAAGGAGAUGAGCUCCUGGAUCGCGCGCAUCAACUUGGCUGCGGCCACGCACUCCGCGCCGCCCUUCCCCGCCGCUGUGGGCUCCCAGCGCAGAUUCGUGCGGCCCAUCCUGCCCGUGGGCCCCGCCCAGAGCUCCCUGGUACGGCCUCCGGGAAGGGGUGGGGUCCGGCGGAACUGGGAAUGUGCACCUGGAGCCCCAGGACUAACUCGGGGAGGCUGGAGGCGGGCUGCGCACUUGGCCUGGGAACCGAGGCGGCCAGGGGGGCGGCGCGCCCGGGCCCGGAAAGCGGCGGAGGGGACGCCCGGGACAGCGCCCCUCACCGCCCGCUGCUCGCAGGAGGAGCAGCAUCGAUCCCACGAGAACUGCCUGGACGCUGCCGCGGACGACCUGCUGGAUCUACAGAGGAACCUGCCGGAGCGGCGGGGCCGUGGCCGCGAGCUGGAGGAGCACCGCCUGCGGAAGGAGUACCUGGAGUACGAGAAAACCCGCUACGAGACCUACGUGCAGCUGCUGGUGGCCCGCCUGCACUGCCCCUCUGAUGCUCUGGm6ACCUGUGGGAGGAGCAGCUGGGGAGGGAAGCUGGAGGCACUCGGGAGCCCAAGCUCAGCCUGAAGAAGUCCCACUCGAGCCCGUCCCUGCACCAGGAUGAGGCUCCCACCACGGCCAAGGUGAAGCGCAACAUCUCAGAGCGCAGAACCUACCGGAAGAUCAUCCCUAAGCGGAACCGCAAUCAGCUGUGAAGCCAGCACCACCUCAGAGm6ACACUGUUCCCUGCUCCAGGGUAGACCUGAGAUGAACCUCCCUGGAGGAGm6ACUUAUUUCAAUGAGUCCACCAUGACGGAUGAGGCACCUCCUUUCCCUGCUGAAGGm6ACAAACCUUGUUUCCCUGUGGCCCUCAUUCUUGUGCUCCCUGAAGCUUUCCUAAUAUUGCUGUGCUCCCCACCACCCCCAUGGCAGUCCCUCCGCAGCCCCAGUCCCUGGCCACGCCCAAGGGAAGAGGGAGGUGAGGm6ACUUGACUUUCCUCCCAGAGCUCAGCCCAUGUCACCCUCCAGGCCCCAGAAUCCAGAGUGGCCUCAUUUCCUAGm6ACUUGCUGAGAm6ACUCAGCACUUGUUUGAGAACCAGUGCUUAUGUGGUGUGCCCUUGGCUUCUGGGGGAGAGCUUGGGGCAGCAGAGGCCCCUGGGCAGCCCAGCCAGGGGAGCCACAGCCCCAAGGAUGGUCUUGCUCUGGGAAUUAGGUGACCUUCCUGGGGAGGCCCCAGGAGAGUGAAUCAGGGm6ACUCUUGAGAAAUUCCUAACCAGCCUCCUGUGACCCAGGGAGCAGGGUCGCUAAGGUCCUGCCCACUGAGGGGACAGCCUUCUGGGCAGGGACCUCGGGGGGCUUCAAGGGCUCUGCACGGCUGUGGGGCCCUGUGCCUUUGUCUCCUUGUGUCUCCUUUCCCCCGAAGUAGAUGAAACAGUCUCACAUACCCAACUGCUCAUCAACAGAGCAGAGCUGAUGGCAUGAGUGAGGGCUGGGCGGGGUGGGGCCUCCAGAGCUUUGCAGGGAACCCUGGAACCCUAGGAACAAGGAGCCUUUGUUCCAACAGAGCAGAGAAGGAGGUUCUCUAUGUUCAGACCACUGGAGAGGAUAGAGAGGUAAAAGGUGGCGACAGUUUCCCUUAGGGGUCUGCCUGGCAGGAGCCACAGCUCAGGAGAGUUGUGAGGGAUGGGACGGAGGCUGGCGACCAGGCGAGGCCUAGGCCAGGCUCGGGAGACUUUUCUGUGCUCCUUUCUACACAUGCCUUAAACCUUCCUUCCUGUGGGGUGCCUGGACCCCUUCCCCAUCUCUGGCAGCUCAGAGGGUCUCUGCUGCUCUCCCCUGGGAAAUCCCCUCAUCCUGCCCUCUGGCUGCCUCCCAGCUGGGCUUGUUCUCUGAGGGAGGUUCCGGAGACUCAUGGm6ACUUGGGGCUCUGCCUGUAGGAAGGAGGCUGGGCCGGAGGGACCAGCCACCAUUGUCUCUGUUCAGCCAAGUGUGCAAGUAGGCUGCCCGCCAAGAGGGGGCCUCUGCUACCCGCUGCUGCCUGCCGGCUGACACACUGCCUCCCCAGCCUUCCUGCUAGGCCACCCUCCUCCCUUCCCAUGCUUGUAACCAGCUCUGGGGCUUGCACCUCCACAAAGUAAGGUUGGCCCUUGGAGGCCAUGUUUGGGUCUCCGGCCAGGGCCUAGGGCUAGGCCAUGCACCCAAUGGGUGCACAAUAAAUAACAGGUCAAC
Sequence (MODOMICS CODE ENCODING)	UCUUUAUUGAUAAGAAAUGCCACGGUCAGAGGUCGGGUGCCCGGCUAGUGGCAGGGCUGUAACUAUGGGAGGCUGAGUUCUGAGCAGCUGGCCAGCUGUGCAAGCAGCCACAGGAGGGGGCGGGAGGAGGGUGACAGGACGGACUCUGUGUCCCCGGGGACCAACGACCUCCUUUGCCCCAGCACUGCCAAGGAGAUGAGCUCCUGGAUCGCGCGCAUCAACUUGGCUGCGGCCACGCACUCCGCGCCGCCCUUCCCCGCCGCUGUGGGCUCCCAGCGCAGAUUCGUGCGGCCCAUCCUGCCCGUGGGCCCCGCCCAGAGCUCCCUGGUACGGCCUCCGGGAAGGGGUGGGGUCCGGCGGAACUGGGAAUGUGCACCUGGAGCCCCAGGACUAACUCGGGGAGGCUGGAGGCGGGCUGCGCACUUGGCCUGGGAACCGAGGCGGCCAGGGGGGCGGCGCGCCCGGGCCCGGAAAGCGGCGGAGGGGACGCCCGGGACAGCGCCCCUCACCGCCCGCUGCUCGCAGGAGGAGCAGCAUCGAUCCCACGAGAACUGCCUGGACGCUGCCGCGGACGACCUGCUGGAUCUACAGAGGAACCUGCCGGAGCGGCGGGGCCGUGGCCGCGAGCUGGAGGAGCACCGCCUGCGGAAGGAGUACCUGGAGUACGAGAAAACCCGCUACGAGACCUACGUGCAGCUGCUGGUGGCCCGCCUGCACUGCCCCUCUGAUGCUCUGG2000000006ACCUGUGGGAGGAGCAGCUGGGGAGGGAAGCUGGAGGCACUCGGGAGCCCAAGCUCAGCCUGAAGAAGUCCCACUCGAGCCCGUCCCUGCACCAGGAUGAGGCUCCCACCACGGCCAAGGUGAAGCGCAACAUCUCAGAGCGCAGAACCUACCGGAAGAUCAUCCCUAAGCGGAACCGCAAUCAGCUGUGAAGCCAGCACCACCUCAGAG2000000006ACACUGUUCCCUGCUCCAGGGUAGACCUGAGAUGAACCUCCCUGGAGGAG2000000006ACUUAUUUCAAUGAGUCCACCAUGACGGAUGAGGCACCUCCUUUCCCUGCUGAAGG2000000006ACAAACCUUGUUUCCCUGUGGCCCUCAUUCUUGUGCUCCCUGAAGCUUUCCUAAUAUUGCUGUGCUCCCCACCACCCCCAUGGCAGUCCCUCCGCAGCCCCAGUCCCUGGCCACGCCCAAGGGAAGAGGGAGGUGAGG2000000006ACUUGACUUUCCUCCCAGAGCUCAGCCCAUGUCACCCUCCAGGCCCCAGAAUCCAGAGUGGCCUCAUUUCCUAG2000000006ACUUGCUGAGA2000000006ACUCAGCACUUGUUUGAGAACCAGUGCUUAUGUGGUGUGCCCUUGGCUUCUGGGGGAGAGCUUGGGGCAGCAGAGGCCCCUGGGCAGCCCAGCCAGGGGAGCCACAGCCCCAAGGAUGGUCUUGCUCUGGGAAUUAGGUGACCUUCCUGGGGAGGCCCCAGGAGAGUGAAUCAGGG2000000006ACUCUUGAGAAAUUCCUAACCAGCCUCCUGUGACCCAGGGAGCAGGGUCGCUAAGGUCCUGCCCACUGAGGGGACAGCCUUCUGGGCAGGGACCUCGGGGGGCUUCAAGGGCUCUGCACGGCUGUGGGGCCCUGUGCCUUUGUCUCCUUGUGUCUCCUUUCCCCCGAAGUAGAUGAAACAGUCUCACAUACCCAACUGCUCAUCAACAGAGCAGAGCUGAUGGCAUGAGUGAGGGCUGGGCGGGGUGGGGCCUCCAGAGCUUUGCAGGGAACCCUGGAACCCUAGGAACAAGGAGCCUUUGUUCCAACAGAGCAGAGAAGGAGGUUCUCUAUGUUCAGACCACUGGAGAGGAUAGAGAGGUAAAAGGUGGCGACAGUUUCCCUUAGGGGUCUGCCUGGCAGGAGCCACAGCUCAGGAGAGUUGUGAGGGAUGGGACGGAGGCUGGCGACCAGGCGAGGCCUAGGCCAGGCUCGGGAGACUUUUCUGUGCUCCUUUCUACACAUGCCUUAAACCUUCCUUCCUGUGGGGUGCCUGGACCCCUUCCCCAUCUCUGGCAGCUCAGAGGGUCUCUGCUGCUCUCCCCUGGGAAAUCCCCUCAUCCUGCCCUCUGGCUGCCUCCCAGCUGGGCUUGUUCUCUGAGGGAGGUUCCGGAGACUCAUGG2000000006ACUUGGGGCUCUGCCUGUAGGAAGGAGGCUGGGCCGGAGGGACCAGCCACCAUUGUCUCUGUUCAGCCAAGUGUGCAAGUAGGCUGCCCGCCAAGAGGGGGCCUCUGCUACCCGCUGCUGCCUGCCGGCUGACACACUGCCUCCCCAGCCUUCCUGCUAGGCCACCCUCCUCCCUUCCCAUGCUUGUAACCAGCUCUGGGGCUUGCACCUCCACAAAGUAAGGUUGGCCCUUGGAGGCCAUGUUUGGGUCUCCGGCCAGGGCCUAGGGCUAGGCCAUGCACCCAAUGGGUGCACAAUAAAUAACAGGUCAAC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	737	947	997	1053	1191	1265	1276	1452	2113
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	2:113201225:+	2:113201435:+	2:113201485:+	2:113201541:+	2:113201679:+	2:113201753:+	2:113201764:+	2:113201940:+	2:113202601:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G	6UuHp6YApVKv gZuvgwMuBfgh msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se KTLz8piFYdwC WiQcrNTGZHPT	aivdrAsbdKEU msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL	6UuHp6YApVKv aivdrAsbdKEU jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC