General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000606557
Gene ID:	ENSG00000089006
Gene Name:	SNX5
Sequence (UNICHARACTER ENCODING)	CUGGGAGAGUGUCCGUUGCUUCCCGUCCGUGUCGCGGCCCUGCGGUUGGCGGCCUCCUCGUGGAGCGGAGCAAGGGUAGGCCCCACGUGGCGUCUUUGCCCGGCUCCAAGAUGGACGGCAGCGGGGЖCUGGGAGGCUGCUCUGGGGGAGCACGUGGCGCCCUGCUCGCCUGCUCCCGGGGCAGCUGGGAUGGUGGCGGAGUCCGGAGGCCUCCUGCCGCCGUCGGGCAGGGAGGCCGGCGGAGGCGGGGCCGUGGCCGCCCCCGAGAGGCGCCCAGGCGGCGGCGGCGGCGGCCCAGCUUCUUCUUUCCUCGCACAGCCAGGCGGCCCCUGCUCGAGUCCCGCGUCGCCAUGGCCGCGGUUCCCGAGUUGCUGCAGCAGCAGGAGGAGGACCGCAGCAAGGUGAGGUCCUCCCAGCCUCAGЖCUCCUGGGCGGGCGGCCCUGCGAGCUCCGGGGUCGCUGCAUUCUUUCCCUUGCGCGUCCAUAGGCCGUGGCUGCUCGCCGCCAUCCCCAGCGCGGGAAGCACCCGUGAGЖCCCGGGCGGCCCCUCUCCCUGGUCUUCACUGAAGGCUGCCCCGGGGAAUCCCUGUGGAUGUCCCGGAUUCUAUUAGGЖCAGAACCAGAGACGCGGGЖCCUUAGCCCCAGCUCAGGCGCCGGUGCCGAGCGGЖCUUGGAGAGAUGAUCUCUGGAGACCCCGGAAUGUUCUUUUUAAAЖCUUUCCUCGGCUUCGUGGUGACCAGUAGGUGAACGUGAAAUUGЖCUUAЖCAUGCGACAGACCAGUUUGGUUUGUUGCCCCCAAAAUACCCPCCUUCCCCCCACCUUUUACUGAGAAGЖCUUUUUUGGGGGGGGGGCCCAAЖCAACUUGGGAAAUUGCAUCAAGCGUCCGAACAUGCUGCUUACAACUPUAGAAACGCAAAAUGCGUUGUUGUGGGAGUUGUGUAAUUUUUAGUAGGUGCUCAAAUACUUGCUGAACUUGGUGUCUAUUUUUAAGUCUUGCCCAUUGAUGUAAЖCUGUCCCUAGGUCACGUGUAUCUUGAGGUCUAAAAGAUUAUUUAUGCAAUAAAUUGAAAUUCCCAUAGCCAAUUAAAGAUUCAGA
Sequence (SHORT NAMES ENCODING)	CUGGGAGAGUGUCCGUUGCUUCCCGUCCGUGUCGCGGCCCUGCGGUUGGCGGCCUCCUCGUGGAGCGGAGCAAGGGUAGGCCCCACGUGGCGUCUUUGCCCGGCUCCAAGAUGGACGGCAGCGGGGm6ACUGGGAGGCUGCUCUGGGGGAGCACGUGGCGCCCUGCUCGCCUGCUCCCGGGGCAGCUGGGAUGGUGGCGGAGUCCGGAGGCCUCCUGCCGCCGUCGGGCAGGGAGGCCGGCGGAGGCGGGGCCGUGGCCGCCCCCGAGAGGCGCCCAGGCGGCGGCGGCGGCGGCCCAGCUUCUUCUUUCCUCGCACAGCCAGGCGGCCCCUGCUCGAGUCCCGCGUCGCCAUGGCCGCGGUUCCCGAGUUGCUGCAGCAGCAGGAGGAGGACCGCAGCAAGGUGAGGUCCUCCCAGCCUCAGm6ACUCCUGGGCGGGCGGCCCUGCGAGCUCCGGGGUCGCUGCAUUCUUUCCCUUGCGCGUCCAUAGGCCGUGGCUGCUCGCCGCCAUCCCCAGCGCGGGAAGCACCCGUGAGm6ACCCGGGCGGCCCCUCUCCCUGGUCUUCACUGAAGGCUGCCCCGGGGAAUCCCUGUGGAUGUCCCGGAUUCUAUUAGGm6ACAGAACCAGAGACGCGGGm6ACCUUAGCCCCAGCUCAGGCGCCGGUGCCGAGCGGm6ACUUGGAGAGAUGAUCUCUGGAGACCCCGGAAUGUUCUUUUUAAAm6ACUUUCCUCGGCUUCGUGGUGACCAGUAGGUGAACGUGAAAUUGm6ACUUAm6ACAUGCGACAGACCAGUUUGGUUUGUUGCCCCCAAAAUACCCYCCUUCCCCCCACCUUUUACUGAGAAGm6ACUUUUUUGGGGGGGGGGCCCAAm6ACAACUUGGGAAAUUGCAUCAAGCGUCCGAACAUGCUGCUUACAACUYUAGAAACGCAAAAUGCGUUGUUGUGGGAGUUGUGUAAUUUUUAGUAGGUGCUCAAAUACUUGCUGAACUUGGUGUCUAUUUUUAAGUCUUGCCCAUUGAUGUAAm6ACUGUCCCUAGGUCACGUGUAUCUUGAGGUCUAAAAGAUUAUUUAUGCAAUAAAUUGAAAUUCCCAUAGCCAAUUAAAGAUUCAGA
Sequence (MODOMICS CODE ENCODING)	CUGGGAGAGUGUCCGUUGCUUCCCGUCCGUGUCGCGGCCCUGCGGUUGGCGGCCUCCUCGUGGAGCGGAGCAAGGGUAGGCCCCACGUGGCGUCUUUGCCCGGCUCCAAGAUGGACGGCAGCGGGG2000000006ACUGGGAGGCUGCUCUGGGGGAGCACGUGGCGCCCUGCUCGCCUGCUCCCGGGGCAGCUGGGAUGGUGGCGGAGUCCGGAGGCCUCCUGCCGCCGUCGGGCAGGGAGGCCGGCGGAGGCGGGGCCGUGGCCGCCCCCGAGAGGCGCCCAGGCGGCGGCGGCGGCGGCCCAGCUUCUUCUUUCCUCGCACAGCCAGGCGGCCCCUGCUCGAGUCCCGCGUCGCCAUGGCCGCGGUUCCCGAGUUGCUGCAGCAGCAGGAGGAGGACCGCAGCAAGGUGAGGUCCUCCCAGCCUCAG2000000006ACUCCUGGGCGGGCGGCCCUGCGAGCUCCGGGGUCGCUGCAUUCUUUCCCUUGCGCGUCCAUAGGCCGUGGCUGCUCGCCGCCAUCCCCAGCGCGGGAAGCACCCGUGAG2000000006ACCCGGGCGGCCCCUCUCCCUGGUCUUCACUGAAGGCUGCCCCGGGGAAUCCCUGUGGAUGUCCCGGAUUCUAUUAGG2000000006ACAGAACCAGAGACGCGGG2000000006ACCUUAGCCCCAGCUCAGGCGCCGGUGCCGAGCGG2000000006ACUUGGAGAGAUGAUCUCUGGAGACCCCGGAAUGUUCUUUUUAAA2000000006ACUUUCCUCGGCUUCGUGGUGACCAGUAGGUGAACGUGAAAUUG2000000006ACUUA2000000006ACAUGCGACAGACCAGUUUGGUUUGUUGCCCCCAAAAUACCC2000000009UCCUUCCCCCCACCUUUUACUGAGAAG2000000006ACUUUUUUGGGGGGGGGGCCCAA2000000006ACAACUUGGGAAAUUGCAUCAAGCGUCCGAACAUGCUGCUUACAACU2000000009UUAGAAACGCAAAAUGCGUUGUUGUGGGAGUUGUGUAAUUUUUAGUAGGUGCUCAAAUACUUGCUGAACUUGGUGUCUAUUUUUAAGUCUUGCCCAUUGAUGUAA2000000006ACUGUCCCUAGGUCACGUGUAUCUUGAGGUCUAAAAGAUUAUUUAUGCAAUAAAUUGAAAUUCCCAUAGCCAAUUAAAGAUUCAGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	127	422	532	610	629	664	709	753	758	800	827	850	897	1002
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A	Y	m6A
Genomic Coordinates	20:17968648:-	20:17968353:-	20:17968243:-	20:17968165:-	20:17968146:-	20:17968111:-	20:17968066:-	20:17968022:-	20:17968017:-	20:17967975:-	20:17967948:-	20:17967925:-	20:17967878:-	20:17967773:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq Yfn77uLS5tv8	6UuHp6YApVKv gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 6UuHp6YApVKv Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL nfCHyrYzE6fB BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BkoLW2CBToyL nfCHyrYzE6fB Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	5aTkEfEpX8Xm 6UuHp6YApVKv Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 5aTkEfEpX8Xm 5Nnepx5V7yHo 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL KTLz8piFYdwC nfCHyrYzE6fB Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL nfCHyrYzE6fB Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	VL7zkHvkfkoB BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8