General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000377759
Gene ID:	ENSG00000089006
Gene Name:	SNX5
Sequence (UNICHARACTER ENCODING)	CUUUCUCUAGACGCGUCUUGCUGGGAGAGUGUCCGUUGCUUCCCGUCCGUGUCGCGGCCCUGCGGUUGGCGGCCUCCUCGUGGAGCGGAGCAAGGGUAGGCCCCACGUGGCGUCUUUGCCCGGCUCCAAGAUGGACGGCAGCGGGGЖCUGGGAGGCUGCUCUGGGGGAGCACGUGGCGCCCUGCUCGCCUGCUCCCGGGGCAGCUGGGAUGGUGGCGGAGUCCGGAGGCCUCCUGCCGCCGUCGGGCAGGGAGGCCGGCGGAGGCGGGGCCGUGGCCGCCCCCGAGAGGCGCCCAGGCGGCGGCGGCGGCGGCCCAGCUUCUUCUUUCCUCGCACAGCCAGGCGGCCCCUGCUCGAGUCCCGCGUCGCCAUGGCCGCGGUUCCCGAGUUGCUGCAGCAGCAGGAGGAGGACCGCAGCAAGCUGAGAUCUGUAUCUGUGGACCUGAAUGUUGAUCCCUCGCUUCAGAUUGACAUACCUGAUGCGCUCAGUGAGAGAGACAAAGUCAAAUUUACAGUGCACACAAAGACCACACUGCCCACGUUUCAGAGCCCAGAGUUUUCUGUUACAAGGCAACAUGAAGACUUUGUGUGGCUACAUGACACUCUUAUUGAAACAACAGACUAUGCUGGGCUUAUUAUUCCACCUGCUCCUACGAAGCCCGACUUUGAUGGUCCUCGAGAGAAGAUGCAGAAACUGGGAGAAGGUGAAGGGUCUAUGACCAAAGAAGAAUUUGCCAAGAUGAAACAAGAACUGGAAGCUGAGUAUCUCGCUGUGUUUAAGAAGACUGUGUCCUCCCAUGAAGUCUUUCUUCAGCGGCUUUCUUCUCACCCUGUUCUCAGUAAAGAUCGCAACUUUCAUGUUUUCCUGGAAUAUGAUCAGGAUCUAAGUGUUAGGCGGAAAAAUACUAAAGAGAUGUUUGGUGGCUUCUUCAAAAGUGUGGUGAAAAGUGCUGAUGAAGUCCUUUUUACUGGAGUUAAGGAGGUAGAUGACUUCUUUGAGCAAGAGAAGAACUUCCUUAUUAACUAUUACЖAUAGGAUCAAAGAUUCUUGUGUGAAAGCUGACAAAAUGACCAGAUCUCAUAAAAAUGUUGCCGAUGACUAUAUCCACACCGCAGCCUGCUUACAUAGCCUGGCUPUAGAAGAGCCCACAGUCAUCAAAAAGUACCUAUUGAAGGUUGCUGAGCUAUUUGAAAAACUAAGGAAAGUAGAGGGUCGAGUUUCAUCAGAUGAAGAUUUGAAGCUAЖCAGAGCUCCPCCGAUACUACAUGCUCAACAUUGAAGCUGCUAAGGAUCUCUUAUACЖGACGCACCAAAGCCCUCAUUGACUAUGAGAACUCAAACAAAGCUCUGGAUAAGGCCCGGUUAAAGAGCAAAGACGUCAAGUUGGCUGAGGCACACCAGCAGGAGUGCUGCCAGAAAUUUGAACAACUUUCCGAAUCUGCAAAAGAAGAACUGAUAAAUUUCAAACGGAAGAGAGUGGCAGCAUUUAGAAAGAAUCUAAUUGAAAUGUCUGAACUGGAAAUAAAACAUGCCAGGAACAAUGUCUCCCUUUUGCAGAGCUGUAUUGACUUGUUCAAGAAUAACUGAUAUGCCUUCACUCAGAAGAAAAGAAAUGAAUGUGAAAGAAAGCCAAGCAUCACUUGCACUUAAAUCAUUACCACGGAAGAUAUAUUAGCUUCAACUPUAGUUUAAAAUUAUGUGAAUAAAUAUUUUGAUUUCUACAAAUCUUAЖCAUUUAACCAUGUUGGUUUAAAAAUAUUAUUGCUUGCUACUUGGЖCAUAACUAAUUUUUCCUUGUGCAUUUAAUACCUCUGGGCAGAAUCCAAAUACUGGGUUCUCCCGUAGUUCGUCUPUAGUUACUAAGAAAGGGUGUAGGACACAUUAGCCUUCUGGAAACAAGUAGAAGCCAUCACCUGGCCCAUGUCCCUACAAACCCAUGAUUGUCAGGGAGGUGCCAGUUACAGCAGGUGAUUCAGCUACUUGAGGUCGGUAACAGACCUUCCAUUCCUCACUGAAGGUGGGGUUUGUGUUUUUGUUUUGCCCUGUUACUCCACUGGUAGUCAUCUGGUGUUUGUACUAUAЖCAACAGCAAGAAAAUCUCAUUUAUCUPUAUAUACUCUUUGCACCUCCUUUUUUUAGUCGAGAUAUAAAUAUUUGAGGGGAGAGAAAUAUCUACЖGGUAUAUAUGGAAACAAAUAAUGUGGUCUGCUPUAUAAGAUGGCCAGAUCUACAUUAGGAAAAGUAUAAGCCCCCUCCCUAAUGGCCGCUGGGGGGUGAGGGCGGUGUGUUGUAUGUCUUUGGGUGUUUGUUUUUUUAUAAAGCAUAUAAUAAAAUAAUCGUGCUACUAA
Sequence (SHORT NAMES ENCODING)	CUUUCUCUAGACGCGUCUUGCUGGGAGAGUGUCCGUUGCUUCCCGUCCGUGUCGCGGCCCUGCGGUUGGCGGCCUCCUCGUGGAGCGGAGCAAGGGUAGGCCCCACGUGGCGUCUUUGCCCGGCUCCAAGAUGGACGGCAGCGGGGm6ACUGGGAGGCUGCUCUGGGGGAGCACGUGGCGCCCUGCUCGCCUGCUCCCGGGGCAGCUGGGAUGGUGGCGGAGUCCGGAGGCCUCCUGCCGCCGUCGGGCAGGGAGGCCGGCGGAGGCGGGGCCGUGGCCGCCCCCGAGAGGCGCCCAGGCGGCGGCGGCGGCGGCCCAGCUUCUUCUUUCCUCGCACAGCCAGGCGGCCCCUGCUCGAGUCCCGCGUCGCCAUGGCCGCGGUUCCCGAGUUGCUGCAGCAGCAGGAGGAGGACCGCAGCAAGCUGAGAUCUGUAUCUGUGGACCUGAAUGUUGAUCCCUCGCUUCAGAUUGACAUACCUGAUGCGCUCAGUGAGAGAGACAAAGUCAAAUUUACAGUGCACACAAAGACCACACUGCCCACGUUUCAGAGCCCAGAGUUUUCUGUUACAAGGCAACAUGAAGACUUUGUGUGGCUACAUGACACUCUUAUUGAAACAACAGACUAUGCUGGGCUUAUUAUUCCACCUGCUCCUACGAAGCCCGACUUUGAUGGUCCUCGAGAGAAGAUGCAGAAACUGGGAGAAGGUGAAGGGUCUAUGACCAAAGAAGAAUUUGCCAAGAUGAAACAAGAACUGGAAGCUGAGUAUCUCGCUGUGUUUAAGAAGACUGUGUCCUCCCAUGAAGUCUUUCUUCAGCGGCUUUCUUCUCACCCUGUUCUCAGUAAAGAUCGCAACUUUCAUGUUUUCCUGGAAUAUGAUCAGGAUCUAAGUGUUAGGCGGAAAAAUACUAAAGAGAUGUUUGGUGGCUUCUUCAAAAGUGUGGUGAAAAGUGCUGAUGAAGUCCUUUUUACUGGAGUUAAGGAGGUAGAUGACUUCUUUGAGCAAGAGAAGAACUUCCUUAUUAACUAUUACm6AAUAGGAUCAAAGAUUCUUGUGUGAAAGCUGACAAAAUGACCAGAUCUCAUAAAAAUGUUGCCGAUGACUAUAUCCACACCGCAGCCUGCUUACAUAGCCUGGCUYUAGAAGAGCCCACAGUCAUCAAAAAGUACCUAUUGAAGGUUGCUGAGCUAUUUGAAAAACUAAGGAAAGUAGAGGGUCGAGUUUCAUCAGAUGAAGAUUUGAAGCUAm6ACAGAGCUCCYCCGAUACUACAUGCUCAACAUUGAAGCUGCUAAGGAUCUCUUAUACm6AGACGCACCAAAGCCCUCAUUGACUAUGAGAACUCAAACAAAGCUCUGGAUAAGGCCCGGUUAAAGAGCAAAGACGUCAAGUUGGCUGAGGCACACCAGCAGGAGUGCUGCCAGAAAUUUGAACAACUUUCCGAAUCUGCAAAAGAAGAACUGAUAAAUUUCAAACGGAAGAGAGUGGCAGCAUUUAGAAAGAAUCUAAUUGAAAUGUCUGAACUGGAAAUAAAACAUGCCAGGAACAAUGUCUCCCUUUUGCAGAGCUGUAUUGACUUGUUCAAGAAUAACUGAUAUGCCUUCACUCAGAAGAAAAGAAAUGAAUGUGAAAGAAAGCCAAGCAUCACUUGCACUUAAAUCAUUACCACGGAAGAUAUAUUAGCUUCAACUYUAGUUUAAAAUUAUGUGAAUAAAUAUUUUGAUUUCUACAAAUCUUAm6ACAUUUAACCAUGUUGGUUUAAAAAUAUUAUUGCUUGCUACUUGGm6ACAUAACUAAUUUUUCCUUGUGCAUUUAAUACCUCUGGGCAGAAUCCAAAUACUGGGUUCUCCCGUAGUUCGUCUYUAGUUACUAAGAAAGGGUGUAGGACACAUUAGCCUUCUGGAAACAAGUAGAAGCCAUCACCUGGCCCAUGUCCCUACAAACCCAUGAUUGUCAGGGAGGUGCCAGUUACAGCAGGUGAUUCAGCUACUUGAGGUCGGUAACAGACCUUCCAUUCCUCACUGAAGGUGGGGUUUGUGUUUUUGUUUUGCCCUGUUACUCCACUGGUAGUCAUCUGGUGUUUGUACUAUAm6ACAACAGCAAGAAAAUCUCAUUUAUCUYUAUAUACUCUUUGCACCUCCUUUUUUUAGUCGAGAUAUAAAUAUUUGAGGGGAGAGAAAUAUCUACm6AGGUAUAUAUGGAAACAAAUAAUGUGGUCUGCUYUAUAAGAUGGCCAGAUCUACAUUAGGAAAAGUAUAAGCCCCCUCCCUAAUGGCCGCUGGGGGGUGAGGGCGGUGUGUUGUAUGUCUUUGGGUGUUUGUUUUUUUAUAAAGCAUAUAAUAAAAUAAUCGUGCUACUAA
Sequence (MODOMICS CODE ENCODING)	CUUUCUCUAGACGCGUCUUGCUGGGAGAGUGUCCGUUGCUUCCCGUCCGUGUCGCGGCCCUGCGGUUGGCGGCCUCCUCGUGGAGCGGAGCAAGGGUAGGCCCCACGUGGCGUCUUUGCCCGGCUCCAAGAUGGACGGCAGCGGGG2000000006ACUGGGAGGCUGCUCUGGGGGAGCACGUGGCGCCCUGCUCGCCUGCUCCCGGGGCAGCUGGGAUGGUGGCGGAGUCCGGAGGCCUCCUGCCGCCGUCGGGCAGGGAGGCCGGCGGAGGCGGGGCCGUGGCCGCCCCCGAGAGGCGCCCAGGCGGCGGCGGCGGCGGCCCAGCUUCUUCUUUCCUCGCACAGCCAGGCGGCCCCUGCUCGAGUCCCGCGUCGCCAUGGCCGCGGUUCCCGAGUUGCUGCAGCAGCAGGAGGAGGACCGCAGCAAGCUGAGAUCUGUAUCUGUGGACCUGAAUGUUGAUCCCUCGCUUCAGAUUGACAUACCUGAUGCGCUCAGUGAGAGAGACAAAGUCAAAUUUACAGUGCACACAAAGACCACACUGCCCACGUUUCAGAGCCCAGAGUUUUCUGUUACAAGGCAACAUGAAGACUUUGUGUGGCUACAUGACACUCUUAUUGAAACAACAGACUAUGCUGGGCUUAUUAUUCCACCUGCUCCUACGAAGCCCGACUUUGAUGGUCCUCGAGAGAAGAUGCAGAAACUGGGAGAAGGUGAAGGGUCUAUGACCAAAGAAGAAUUUGCCAAGAUGAAACAAGAACUGGAAGCUGAGUAUCUCGCUGUGUUUAAGAAGACUGUGUCCUCCCAUGAAGUCUUUCUUCAGCGGCUUUCUUCUCACCCUGUUCUCAGUAAAGAUCGCAACUUUCAUGUUUUCCUGGAAUAUGAUCAGGAUCUAAGUGUUAGGCGGAAAAAUACUAAAGAGAUGUUUGGUGGCUUCUUCAAAAGUGUGGUGAAAAGUGCUGAUGAAGUCCUUUUUACUGGAGUUAAGGAGGUAGAUGACUUCUUUGAGCAAGAGAAGAACUUCCUUAUUAACUAUUAC2000000006AAUAGGAUCAAAGAUUCUUGUGUGAAAGCUGACAAAAUGACCAGAUCUCAUAAAAAUGUUGCCGAUGACUAUAUCCACACCGCAGCCUGCUUACAUAGCCUGGCU2000000009UUAGAAGAGCCCACAGUCAUCAAAAAGUACCUAUUGAAGGUUGCUGAGCUAUUUGAAAAACUAAGGAAAGUAGAGGGUCGAGUUUCAUCAGAUGAAGAUUUGAAGCUA2000000006ACAGAGCUCC2000000009UCCGAUACUACAUGCUCAACAUUGAAGCUGCUAAGGAUCUCUUAUAC2000000006AGACGCACCAAAGCCCUCAUUGACUAUGAGAACUCAAACAAAGCUCUGGAUAAGGCCCGGUUAAAGAGCAAAGACGUCAAGUUGGCUGAGGCACACCAGCAGGAGUGCUGCCAGAAAUUUGAACAACUUUCCGAAUCUGCAAAAGAAGAACUGAUAAAUUUCAAACGGAAGAGAGUGGCAGCAUUUAGAAAGAAUCUAAUUGAAAUGUCUGAACUGGAAAUAAAACAUGCCAGGAACAAUGUCUCCCUUUUGCAGAGCUGUAUUGACUUGUUCAAGAAUAACUGAUAUGCCUUCACUCAGAAGAAAAGAAAUGAAUGUGAAAGAAAGCCAAGCAUCACUUGCACUUAAAUCAUUACCACGGAAGAUAUAUUAGCUUCAACU2000000009UUAGUUUAAAAUUAUGUGAAUAAAUAUUUUGAUUUCUACAAAUCUUA2000000006ACAUUUAACCAUGUUGGUUUAAAAAUAUUAUUGCUUGCUACUUGG2000000006ACAUAACUAAUUUUUCCUUGUGCAUUUAAUACCUCUGGGCAGAAUCCAAAUACUGGGUUCUCCCGUAGUUCGUCU2000000009UUAGUUACUAAGAAAGGGUGUAGGACACAUUAGCCUUCUGGAAACAAGUAGAAGCCAUCACCUGGCCCAUGUCCCUACAAACCCAUGAUUGUCAGGGAGGUGCCAGUUACAGCAGGUGAUUCAGCUACUUGAGGUCGGUAACAGACCUUCCAUUCCUCACUGAAGGUGGGGUUUGUGUUUUUGUUUUGCCCUGUUACUCCACUGGUAGUCAUCUGGUGUUUGUACUAUA2000000006ACAACAGCAAGAAAAUCUCAUUUAUCU2000000009UUAUAUACUCUUUGCACCUCCUUUUUUUAGUCGAGAUAUAAAUAUUUGAGGGGAGAGAAAUAUCUAC2000000006AGGUAUAUAUGGAAACAAAUAAUGUGGUCUGCU2000000009UUAUAAGAUGGCCAGAUCUACAUUAGGAAAAGUAUAAGCCCCCUCCCUAAUGGCCGCUGGGGGGUGAGGGCGGUGUGUUGUAUGUCUUUGGGUGUUUGUUUUUUUAUAAAGCAUAUAAUAAAAUAAUCGUGCUACUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	147	1030	1135	1243	1253	1300	1681	1728	1773	1848	2077	2104	2171	2204
Modification Positions	m6A	m6A	Y	m6A	Y	m6A	Y	m6A	m6A	Y	m6A	Y	m6A	Y
Genomic Coordinates	20:17968648:-	20:17950345:-	20:17950157:-	20:17948934:-	20:17948924:-	20:17947633:-	20:17942260:-	20:17942213:-	20:17942168:-	20:17942093:-	20:17941864:-	20:17941837:-	20:17941770:-	20:17941737:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw KENzb7mwdBd9 Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8