General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000436129
Gene ID:	ENSG00000130699
Gene Name:	TAF4
Sequence (UNICHARACTER ENCODING)	GAUCUGGCCCUCUUGCUCUGGGCUCCCUUUUGUCUGACUGUAGACUCUGGGCACCCUGGCCGCUUGCAGGGGUGAGCACAGCUGUCAUCUGCUCCUGAAGGCGCGGAUGCCCUGACUGUGUGGAUCCUGUCUGUGUGGCCCCUGGCACGCUGUGACCUCCUGCAGCACCGCACUUGCAGUGCUGGCUUUGAUAAUGGAGUUACUUUUAGGCUGAUCUGCCUCCUAGCAAAAUGCCUGACACCGAGUAGGUGCCUGGAUGGAAAAAUAGAAGCAGAAGAUUUCACAAGCAGGUUAUACCGAGAACUUAAUUCUUCACCUCAACCUUACCUUGUGCCUUUCCUGAAGAGGAGCUUACCCGCCUUGAGACAGCUGACCCCCGACUCCGCGGCCUUCAUCCAGCAGAGCCAGCAGCAGCCGCCACCGCCCACCUCGCAGGCCACCACUGCGCUCACGGCCGUGGUGCUGAGUAGCUCGGUCCAGCGCACGGCCGGGAAGACGGCGGCCACCGUGACCAGUGCCCUCCAGCCCCCUGUGCUCAGCCUCACGCAGCCCACGCAGGUCGGCGUCGGCAAGCAGGGGCAACCCACACCGCUGGUCAUCCAGCAGCCUCCGAAGCCAGGAGCCCUGAUCCGGCCCCCGCAGGUGACGUUGACGCAGACACCCAUGGUCGCCCUGCGGCAGCCUCACAACCGGAUCAUGCUCACCACGCCUCAGCAGAUCCAGCUGAACCCACUGCAGCCAGUCCCUGUGGUGAAACCCGCCGUGUUACCUGGAACCAAAGCCCUUUCUGCUGUCUCGGCACAAGCAGCUGCUGCACAGAAAAAUAAACUCAAGGAGCCUGGGGGAGGUUCGUUUCGGGACGAUGAUGACAUUAAUGAUGUUGCAUCGAUGGCUGGAGUAAACUUGUCAGAAGAAAGUGCAAGAAUAUUAGCCACGAACUCUGAAUUGGUGGGCACGCUAACGCGGUCCUGUAAAGAUGAAACCUUCCUCCUCCAAGCGCCUUUGCAGAGAAGAAUAUUAGAAAUAGGUAAAAAACAUGGUAUAACGGAAUUACAUCCAGAUGUAGUAAGUUAUGUAUCACAUGCCACGCAACAAAGGCUACAGAAUCUUGUAGAGAAAAUAUCAGAAACAGCUCAGCAGAAGAACUUUUCUUACAAGGAUGACGACAGAUAUGAGCAGGCGAGUGACGUCCGGGCACAGCUCAAGUUUUUUGAACAGCUUGAUCAAAUCGAAAAGCAGAGGAAGGAUGAGCAGGAGCGGGAGAUCCUGAUGAGGGCAGCAAAGUCUCGGUCAAGACAAGAAGAUCCAGAACAGUUAAGGCUGAAACAGAAGGCAAAGGAGAUGCAGCAACAGGAACUGGCACAAAUGAGACAGCGGGACGCCAACCUCACAGCACUAGCAGCGAUCGGGCCCAGGAAAAAGAGGAAAGUGGACUGUCCGGGGCCGGGCUCAGGAGCAGAGGGGUCGGGCCCCGGCUCAGUGGUCCCAGGCAGCUCGGGUGUCGGAACCCCCAGACAGUUCACGCGACAAAGAAUCACGCGGGUCAACCUCAGGGACCUCAUAUUUUGUUUAGAAAAUGAACGUGAGACAAGCCAUUCACUGCUGCUCUACAAAGCAUUCCUUAAGUGACACAGGAGGACGCCUGGGGЖCUUUUUAUAUAUUUGCAGAUUACGCCUUUUUGUAACGAGCAAAUGGGAUAUUGUUUAAAAAACAGCCACCUCUUUACAAUGGAЖCAGUUUUAUAUUCCUGUUUCUAAAUCAGCUCUUCAGUGUGAAAGAAAACACGUUUCUGUAACAGAGAGAACACAAAGGCCUGUGGAUACUCUUAAAGGЖCAAUUAAAUCUUAACUCAUCUUGAUUGAGUGGCCUUCCUGCCAAACAAGCCAUAUAUAAAGЖCUGAUGGAAUCGUUAGCAAAUAAUUAGCUGCCCUCUGUCAACUCAUAGCAGUUUCUGCAUUAUUUGUGCAUUUUGGUUUAGUUCUACCUAACUUACUAUGUAGGUGUAUGUCUACAGCCGAUGACCUCAUUUCGUUUAUUUUAUUUUUGUAAUAGUCAGUUGGCAAAGCAAACUGAUUUUUUAGACUAUUUAUCUUCCUUCCCUUCCCCUCCCACCCCGCUCUCCUCUCUGCCCCCUGCCCUCCCCUCCCCUCCCUUCCCCUCCACUCCGCUGAGAAUCCUGGAGGAAUACACAAUUCAUCGUUGCACCCCCACCUCAGAGUGUAAUCGCAUUUCUGCUUGGUAGAGGCCGAGCCCAGCAAAGGUGGCUCCUUCUGAAUGUGUGGUCAGCAUCUGUACAAAUGCAUUUUAUUUGCUAUAGUUUGUAAAGCUGUAAAGUUAAAAGAGAUGAAAACCUUUUCAGCAUAAAUAUAUUUUACUUGCACUGUGUUUUUUAGCUAAAAGUGAAAACCUAGAUUAAAUAAAAUCAAAGUUGAGAAGAAUCAUC
Sequence (SHORT NAMES ENCODING)	GAUCUGGCCCUCUUGCUCUGGGCUCCCUUUUGUCUGACUGUAGACUCUGGGCACCCUGGCCGCUUGCAGGGGUGAGCACAGCUGUCAUCUGCUCCUGAAGGCGCGGAUGCCCUGACUGUGUGGAUCCUGUCUGUGUGGCCCCUGGCACGCUGUGACCUCCUGCAGCACCGCACUUGCAGUGCUGGCUUUGAUAAUGGAGUUACUUUUAGGCUGAUCUGCCUCCUAGCAAAAUGCCUGACACCGAGUAGGUGCCUGGAUGGAAAAAUAGAAGCAGAAGAUUUCACAAGCAGGUUAUACCGAGAACUUAAUUCUUCACCUCAACCUUACCUUGUGCCUUUCCUGAAGAGGAGCUUACCCGCCUUGAGACAGCUGACCCCCGACUCCGCGGCCUUCAUCCAGCAGAGCCAGCAGCAGCCGCCACCGCCCACCUCGCAGGCCACCACUGCGCUCACGGCCGUGGUGCUGAGUAGCUCGGUCCAGCGCACGGCCGGGAAGACGGCGGCCACCGUGACCAGUGCCCUCCAGCCCCCUGUGCUCAGCCUCACGCAGCCCACGCAGGUCGGCGUCGGCAAGCAGGGGCAACCCACACCGCUGGUCAUCCAGCAGCCUCCGAAGCCAGGAGCCCUGAUCCGGCCCCCGCAGGUGACGUUGACGCAGACACCCAUGGUCGCCCUGCGGCAGCCUCACAACCGGAUCAUGCUCACCACGCCUCAGCAGAUCCAGCUGAACCCACUGCAGCCAGUCCCUGUGGUGAAACCCGCCGUGUUACCUGGAACCAAAGCCCUUUCUGCUGUCUCGGCACAAGCAGCUGCUGCACAGAAAAAUAAACUCAAGGAGCCUGGGGGAGGUUCGUUUCGGGACGAUGAUGACAUUAAUGAUGUUGCAUCGAUGGCUGGAGUAAACUUGUCAGAAGAAAGUGCAAGAAUAUUAGCCACGAACUCUGAAUUGGUGGGCACGCUAACGCGGUCCUGUAAAGAUGAAACCUUCCUCCUCCAAGCGCCUUUGCAGAGAAGAAUAUUAGAAAUAGGUAAAAAACAUGGUAUAACGGAAUUACAUCCAGAUGUAGUAAGUUAUGUAUCACAUGCCACGCAACAAAGGCUACAGAAUCUUGUAGAGAAAAUAUCAGAAACAGCUCAGCAGAAGAACUUUUCUUACAAGGAUGACGACAGAUAUGAGCAGGCGAGUGACGUCCGGGCACAGCUCAAGUUUUUUGAACAGCUUGAUCAAAUCGAAAAGCAGAGGAAGGAUGAGCAGGAGCGGGAGAUCCUGAUGAGGGCAGCAAAGUCUCGGUCAAGACAAGAAGAUCCAGAACAGUUAAGGCUGAAACAGAAGGCAAAGGAGAUGCAGCAACAGGAACUGGCACAAAUGAGACAGCGGGACGCCAACCUCACAGCACUAGCAGCGAUCGGGCCCAGGAAAAAGAGGAAAGUGGACUGUCCGGGGCCGGGCUCAGGAGCAGAGGGGUCGGGCCCCGGCUCAGUGGUCCCAGGCAGCUCGGGUGUCGGAACCCCCAGACAGUUCACGCGACAAAGAAUCACGCGGGUCAACCUCAGGGACCUCAUAUUUUGUUUAGAAAAUGAACGUGAGACAAGCCAUUCACUGCUGCUCUACAAAGCAUUCCUUAAGUGACACAGGAGGACGCCUGGGGm6ACUUUUUAUAUAUUUGCAGAUUACGCCUUUUUGUAACGAGCAAAUGGGAUAUUGUUUAAAAAACAGCCACCUCUUUACAAUGGAm6ACAGUUUUAUAUUCCUGUUUCUAAAUCAGCUCUUCAGUGUGAAAGAAAACACGUUUCUGUAACAGAGAGAACACAAAGGCCUGUGGAUACUCUUAAAGGm6ACAAUUAAAUCUUAACUCAUCUUGAUUGAGUGGCCUUCCUGCCAAACAAGCCAUAUAUAAAGm6ACUGAUGGAAUCGUUAGCAAAUAAUUAGCUGCCCUCUGUCAACUCAUAGCAGUUUCUGCAUUAUUUGUGCAUUUUGGUUUAGUUCUACCUAACUUACUAUGUAGGUGUAUGUCUACAGCCGAUGACCUCAUUUCGUUUAUUUUAUUUUUGUAAUAGUCAGUUGGCAAAGCAAACUGAUUUUUUAGACUAUUUAUCUUCCUUCCCUUCCCCUCCCACCCCGCUCUCCUCUCUGCCCCCUGCCCUCCCCUCCCCUCCCUUCCCCUCCACUCCGCUGAGAAUCCUGGAGGAAUACACAAUUCAUCGUUGCACCCCCACCUCAGAGUGUAAUCGCAUUUCUGCUUGGUAGAGGCCGAGCCCAGCAAAGGUGGCUCCUUCUGAAUGUGUGGUCAGCAUCUGUACAAAUGCAUUUUAUUUGCUAUAGUUUGUAAAGCUGUAAAGUUAAAAGAGAUGAAAACCUUUUCAGCAUAAAUAUAUUUUACUUGCACUGUGUUUUUUAGCUAAAAGUGAAAACCUAGAUUAAAUAAAAUCAAAGUUGAGAAGAAUCAUC
Sequence (MODOMICS CODE ENCODING)	GAUCUGGCCCUCUUGCUCUGGGCUCCCUUUUGUCUGACUGUAGACUCUGGGCACCCUGGCCGCUUGCAGGGGUGAGCACAGCUGUCAUCUGCUCCUGAAGGCGCGGAUGCCCUGACUGUGUGGAUCCUGUCUGUGUGGCCCCUGGCACGCUGUGACCUCCUGCAGCACCGCACUUGCAGUGCUGGCUUUGAUAAUGGAGUUACUUUUAGGCUGAUCUGCCUCCUAGCAAAAUGCCUGACACCGAGUAGGUGCCUGGAUGGAAAAAUAGAAGCAGAAGAUUUCACAAGCAGGUUAUACCGAGAACUUAAUUCUUCACCUCAACCUUACCUUGUGCCUUUCCUGAAGAGGAGCUUACCCGCCUUGAGACAGCUGACCCCCGACUCCGCGGCCUUCAUCCAGCAGAGCCAGCAGCAGCCGCCACCGCCCACCUCGCAGGCCACCACUGCGCUCACGGCCGUGGUGCUGAGUAGCUCGGUCCAGCGCACGGCCGGGAAGACGGCGGCCACCGUGACCAGUGCCCUCCAGCCCCCUGUGCUCAGCCUCACGCAGCCCACGCAGGUCGGCGUCGGCAAGCAGGGGCAACCCACACCGCUGGUCAUCCAGCAGCCUCCGAAGCCAGGAGCCCUGAUCCGGCCCCCGCAGGUGACGUUGACGCAGACACCCAUGGUCGCCCUGCGGCAGCCUCACAACCGGAUCAUGCUCACCACGCCUCAGCAGAUCCAGCUGAACCCACUGCAGCCAGUCCCUGUGGUGAAACCCGCCGUGUUACCUGGAACCAAAGCCCUUUCUGCUGUCUCGGCACAAGCAGCUGCUGCACAGAAAAAUAAACUCAAGGAGCCUGGGGGAGGUUCGUUUCGGGACGAUGAUGACAUUAAUGAUGUUGCAUCGAUGGCUGGAGUAAACUUGUCAGAAGAAAGUGCAAGAAUAUUAGCCACGAACUCUGAAUUGGUGGGCACGCUAACGCGGUCCUGUAAAGAUGAAACCUUCCUCCUCCAAGCGCCUUUGCAGAGAAGAAUAUUAGAAAUAGGUAAAAAACAUGGUAUAACGGAAUUACAUCCAGAUGUAGUAAGUUAUGUAUCACAUGCCACGCAACAAAGGCUACAGAAUCUUGUAGAGAAAAUAUCAGAAACAGCUCAGCAGAAGAACUUUUCUUACAAGGAUGACGACAGAUAUGAGCAGGCGAGUGACGUCCGGGCACAGCUCAAGUUUUUUGAACAGCUUGAUCAAAUCGAAAAGCAGAGGAAGGAUGAGCAGGAGCGGGAGAUCCUGAUGAGGGCAGCAAAGUCUCGGUCAAGACAAGAAGAUCCAGAACAGUUAAGGCUGAAACAGAAGGCAAAGGAGAUGCAGCAACAGGAACUGGCACAAAUGAGACAGCGGGACGCCAACCUCACAGCACUAGCAGCGAUCGGGCCCAGGAAAAAGAGGAAAGUGGACUGUCCGGGGCCGGGCUCAGGAGCAGAGGGGUCGGGCCCCGGCUCAGUGGUCCCAGGCAGCUCGGGUGUCGGAACCCCCAGACAGUUCACGCGACAAAGAAUCACGCGGGUCAACCUCAGGGACCUCAUAUUUUGUUUAGAAAAUGAACGUGAGACAAGCCAUUCACUGCUGCUCUACAAAGCAUUCCUUAAGUGACACAGGAGGACGCCUGGGG2000000006ACUUUUUAUAUAUUUGCAGAUUACGCCUUUUUGUAACGAGCAAAUGGGAUAUUGUUUAAAAAACAGCCACCUCUUUACAAUGGA2000000006ACAGUUUUAUAUUCCUGUUUCUAAAUCAGCUCUUCAGUGUGAAAGAAAACACGUUUCUGUAACAGAGAGAACACAAAGGCCUGUGGAUACUCUUAAAGG2000000006ACAAUUAAAUCUUAACUCAUCUUGAUUGAGUGGCCUUCCUGCCAAACAAGCCAUAUAUAAAG2000000006ACUGAUGGAAUCGUUAGCAAAUAAUUAGCUGCCCUCUGUCAACUCAUAGCAGUUUCUGCAUUAUUUGUGCAUUUUGGUUUAGUUCUACCUAACUUACUAUGUAGGUGUAUGUCUACAGCCGAUGACCUCAUUUCGUUUAUUUUAUUUUUGUAAUAGUCAGUUGGCAAAGCAAACUGAUUUUUUAGACUAUUUAUCUUCCUUCCCUUCCCCUCCCACCCCGCUCUCCUCUCUGCCCCCUGCCCUCCCCUCCCCUCCCUUCCCCUCCACUCCGCUGAGAAUCCUGGAGGAAUACACAAUUCAUCGUUGCACCCCCACCUCAGAGUGUAAUCGCAUUUCUGCUUGGUAGAGGCCGAGCCCAGCAAAGGUGGCUCCUUCUGAAUGUGUGGUCAGCAUCUGUACAAAUGCAUUUUAUUUGCUAUAGUUUGUAAAGCUGUAAAGUUAAAAGAGAUGAAAACCUUUUCAGCAUAAAUAUAUUUUACUUGCACUGUGUUUUUUAGCUAAAAGUGAAAACCUAGAUUAAAUAAAAUCAAAGUUGAGAAGAAUCAUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1649	1733	1832	1894
Modification Positions	m6A	m6A	m6A	m6A
Genomic Coordinates	20:61976148:-	20:61976064:-	20:61975965:-	20:61975903:-
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5Nnepx5V7yHo aHkqKEJkRYyb Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G Yfn77uLS5tv8	KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo aHkqKEJkRYyb KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 93arJtwJmuS9 nfCHyrYzE6fB Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	6AyXsheySjfx gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G Yfn77uLS5tv8