General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000373803
Gene ID:	ENSG00000101079
Gene Name:	NDRG3
Sequence (UNICHARACTER ENCODING)	GCGCCUCAGAGUUACUGAUUUAUUCUUGAGAUUCCUCUACUCUCGUUAUCUGACCUCAUGGAUGAACUUCAGGAUGUUCAGCUCACAGAGAUCAAACCACUUCUAAAUGAUAAGAAUGGUACAAGAAACUUCCAGGACUUUGACUGUCAGGAACAUGAUAUAGAAACAACUCAUGGUGUGGUCCACGUCACUAUAAGAGGCUUACCCAAAGGAAACAGACCAGUUAUACUAACAUAUCAUGACAUUGGCCUCAACCAUAAAUCCUGUUUCAAUGCAUUCUPUAACUUUGAGGAUAUGCAAGAGAUCACCCAGCACUUUGCUGUCUGUCAUGUGGAUGCCCCAGGCCAGCAGGAAGGUGCACCCUCUUUCCCAACAGGGUAUCAGUACCCCACAAUGGAUGAGCUGGCUGAAAUGCUGCCUCCUGUUCUUACCCACCUAAGCCUGAAAAGCAUCAUUGGAAUUGGAGUUGGAGCUGGAGCUUACAPCCUCAGCAGAUPUGCACUCAACCAPCCAGAGCUUGUGGAAGGCCUUGUGCUCAUUAAUGUUGACCCUUGCGCUAAAGGCUGGAUUGACUGGGCAGCUUCCAAACUCUCUGGCCUGACAACCAAUGUUGUGGACAUUAUUUUGGCUCAUCACUUUGGGCAGGAAGAGUUACAGGCCAACCUGGACCUGAUCCAAACCUACЖGAAUGCAUAUUGCCCAAGACAUCAACCAAGACAACCUGCAGCUCUUCUUGAAUUCCUACAAUGGACGCAGAGACCUGGAGAUCGAAAGACCCAUACUGGGCCAAAAUGAUAACAAAUCAAAAACAUUAAAGUGUUCUACUPUACUGGUGGUAGGGGACAAUUCGCCUGCAGUUGAGGCUGUGGUCGAAUGCAAUUCCCGCCUGAACCCUAUAAAUACAACUUUGCUAAAGAUGGCGGACUGUGGGGGACUGCCCCAGGUAGUUCAGCCUGGGAAGCUCACCGAGGCCUUCAAGUACUUUUUGCAGGGAAUGGGCUACAUCCCGUAUGUGCAGCUCAGUCACCUGAGCACCGAGUCAGUACCAUCUGCCAGCAUGACUCGGCUCGCCCGAUCACGAACCCACUCAACCUCGAGUAGCCUCGGCUCUGGAGAAAGUCCCUUCAGCCGGUCUGUCACCAGCAAUCAGUCAGAUGGAACUCAAGAAUCCUGUGAGUCCCCUGAUGUCCUGGACAGACACCAGACCAUGGAGGUGUCCUGCUAAGCAGAUGCUCCUCCCCUGGACCAUUGCAAGUCCAUCCUUCAAAUGACCACUCCAUAAUAUAACAUUUCAUCCAGUAAACUGGCCUCUACUAUCUPUAACUCAUGCAUGGCCACUGAACCUCUCUCUAGUAGCCUGGAUUUAUCAUUCUCUCUGCCUGCCCACCCCCUUUUUUGUAUAGCCCAAGAACCACUUCCAUGCCAUACUGUAACAUUCCAACAUCUPUAGCUGAUCAGAUCUCUCCAUAUCCUCUCUUGCCAGCUUUUUCCCGUGCUCCCCCAACUAUGUAUCAGAUAAGAUUCUUUGAUCCCGACUCUGUGUGUGCGAGCACGCGUGUCUGUGUUUGUGUGUGCAUAGUUCUGUGGUUUUAGACACGCUUUCUUGUAGUGCUUCUGCAAAAAACAAAAAAGGGACUUAUUUUGCAUUCUCAAUGGUGUUUUUAAGGGAAUUAGGCAGAACAGAUUUCUAGGUUGGGUAGGCCACUGCAUUCUCUUUUGUUUGCAAAUUGGUCAACAAAAUUUGCAAAGUGAUUUCAGGAGAGAGCAGCUUUGAGGAAUGUGGAAAAUCAUAAUUGCCGUCUGGACCAUUGAUUGAUUGUGACCAGUAGCAGAAGGGUGCCUGUUACAUAGAGAGGCUCCUUCUGUCCAAAUGAAUUUCUGUAUACUCUUCUAUAAAUAAAAGGGAGGAAUAUAUUCUGCUGGAAGCCCAUGAACCAUCGCUGAGGUUCUGAUACAACAUAGAGUUUUUUCCAAGGAGUGAAUGUGGUUUAAUUACUGGЖCUCUCUUAGCACAGGAAGGUGGAAACAAAAUGCCAGGCCUCUGCUCUGAAGAGCAAAACUGCUGUCGCUGCAGUAUCUGAUACCAGACAPCCACAUAUCCACAAGAAGUGCCUCUUAGGUCUGUGACAGAGAGUGUGUCUCCAUUCCUCAGUUCCCAGAAAGGGGAGAGGUUUGGCCUAAAAAGCAUGUAGAUGGGGGAGAAAUGGGUGGGGGGAGAGGAЖCAGCCAUUAACACAGUAUCAUGUUUAACAAGUAUAGCCUUGAUUUCAGUAGAUGUAAUGGAAGCCAAAUUAAAUUGAUACAGAACCCAUUUCUCAGAGUCUUUUUUUUUUUUUGAGACAGAGUCUCGCUGUUACCCAGGCUGGAGUGCAAUGGCGCAAACUUGGCUCACUGCAACCUCUGCCCCCUGGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCCGAGUAGCUGAGACUACAGGCACCUGCCACCAUACCCAGCUAAGUUAUGUAUUUUUAGUAGAGAUGGAGUUUCACCAUGUUGGCCAGGCUGGUCUCAAACUCCUGACCUCAGGUGAUCCACCUGCCUCAGCCUCCCAAAGUGCUGGGAUUACAGGCAUGAGUCAUUGCUCCCAGCCAUUAGAAAGAUUGUUAAUCCUAUGAACUCCCUUUUGUAGGAGAGAAAGGGCCAAUCUGUAGGGGUAGCCCUGUCCAGGUAAAGUUGUUUUCAGCCUCAUGUCUACUGUUAGGUGAGGGAGUCACAGCCAGACAGAGAGUAUUGCUGGAGGGUGAGAGAAUUGUGGAGACCAACUACCACAUAGCAAGAGCCCAGCUCUUGGGAGCAUUGAGAUGUAAGCUCAGGGUUACACAGUUCCAAAUCUUGGGAAGGGGCUUUUCAGACAGACUGUUUGCUUUCUGCUGAGAUAAGGAAUGCAUCACUCUGCCAGAGUAUGACUUUUUACAGAUUAUUAAAUAAAGCUGCAUAUGUCUCAUUGUUACCUGA
Sequence (SHORT NAMES ENCODING)	GCGCCUCAGAGUUACUGAUUUAUUCUUGAGAUUCCUCUACUCUCGUUAUCUGACCUCAUGGAUGAACUUCAGGAUGUUCAGCUCACAGAGAUCAAACCACUUCUAAAUGAUAAGAAUGGUACAAGAAACUUCCAGGACUUUGACUGUCAGGAACAUGAUAUAGAAACAACUCAUGGUGUGGUCCACGUCACUAUAAGAGGCUUACCCAAAGGAAACAGACCAGUUAUACUAACAUAUCAUGACAUUGGCCUCAACCAUAAAUCCUGUUUCAAUGCAUUCUYUAACUUUGAGGAUAUGCAAGAGAUCACCCAGCACUUUGCUGUCUGUCAUGUGGAUGCCCCAGGCCAGCAGGAAGGUGCACCCUCUUUCCCAACAGGGUAUCAGUACCCCACAAUGGAUGAGCUGGCUGAAAUGCUGCCUCCUGUUCUUACCCACCUAAGCCUGAAAAGCAUCAUUGGAAUUGGAGUUGGAGCUGGAGCUUACAYCCUCAGCAGAUYUGCACUCAACCAYCCAGAGCUUGUGGAAGGCCUUGUGCUCAUUAAUGUUGACCCUUGCGCUAAAGGCUGGAUUGACUGGGCAGCUUCCAAACUCUCUGGCCUGACAACCAAUGUUGUGGACAUUAUUUUGGCUCAUCACUUUGGGCAGGAAGAGUUACAGGCCAACCUGGACCUGAUCCAAACCUACm6AGAAUGCAUAUUGCCCAAGACAUCAACCAAGACAACCUGCAGCUCUUCUUGAAUUCCUACAAUGGACGCAGAGACCUGGAGAUCGAAAGACCCAUACUGGGCCAAAAUGAUAACAAAUCAAAAACAUUAAAGUGUUCUACUYUACUGGUGGUAGGGGACAAUUCGCCUGCAGUUGAGGCUGUGGUCGAAUGCAAUUCCCGCCUGAACCCUAUAAAUACAACUUUGCUAAAGAUGGCGGACUGUGGGGGACUGCCCCAGGUAGUUCAGCCUGGGAAGCUCACCGAGGCCUUCAAGUACUUUUUGCAGGGAAUGGGCUACAUCCCGUAUGUGCAGCUCAGUCACCUGAGCACCGAGUCAGUACCAUCUGCCAGCAUGACUCGGCUCGCCCGAUCACGAACCCACUCAACCUCGAGUAGCCUCGGCUCUGGAGAAAGUCCCUUCAGCCGGUCUGUCACCAGCAAUCAGUCAGAUGGAACUCAAGAAUCCUGUGAGUCCCCUGAUGUCCUGGACAGACACCAGACCAUGGAGGUGUCCUGCUAAGCAGAUGCUCCUCCCCUGGACCAUUGCAAGUCCAUCCUUCAAAUGACCACUCCAUAAUAUAACAUUUCAUCCAGUAAACUGGCCUCUACUAUCUYUAACUCAUGCAUGGCCACUGAACCUCUCUCUAGUAGCCUGGAUUUAUCAUUCUCUCUGCCUGCCCACCCCCUUUUUUGUAUAGCCCAAGAACCACUUCCAUGCCAUACUGUAACAUUCCAACAUCUYUAGCUGAUCAGAUCUCUCCAUAUCCUCUCUUGCCAGCUUUUUCCCGUGCUCCCCCAACUAUGUAUCAGAUAAGAUUCUUUGAUCCCGACUCUGUGUGUGCGAGCACGCGUGUCUGUGUUUGUGUGUGCAUAGUUCUGUGGUUUUAGACACGCUUUCUUGUAGUGCUUCUGCAAAAAACAAAAAAGGGACUUAUUUUGCAUUCUCAAUGGUGUUUUUAAGGGAAUUAGGCAGAACAGAUUUCUAGGUUGGGUAGGCCACUGCAUUCUCUUUUGUUUGCAAAUUGGUCAACAAAAUUUGCAAAGUGAUUUCAGGAGAGAGCAGCUUUGAGGAAUGUGGAAAAUCAUAAUUGCCGUCUGGACCAUUGAUUGAUUGUGACCAGUAGCAGAAGGGUGCCUGUUACAUAGAGAGGCUCCUUCUGUCCAAAUGAAUUUCUGUAUACUCUUCUAUAAAUAAAAGGGAGGAAUAUAUUCUGCUGGAAGCCCAUGAACCAUCGCUGAGGUUCUGAUACAACAUAGAGUUUUUUCCAAGGAGUGAAUGUGGUUUAAUUACUGGm6ACUCUCUUAGCACAGGAAGGUGGAAACAAAAUGCCAGGCCUCUGCUCUGAAGAGCAAAACUGCUGUCGCUGCAGUAUCUGAUACCAGACAYCCACAUAUCCACAAGAAGUGCCUCUUAGGUCUGUGACAGAGAGUGUGUCUCCAUUCCUCAGUUCCCAGAAAGGGGAGAGGUUUGGCCUAAAAAGCAUGUAGAUGGGGGAGAAAUGGGUGGGGGGAGAGGAm6ACAGCCAUUAACACAGUAUCAUGUUUAACAAGUAUAGCCUUGAUUUCAGUAGAUGUAAUGGAAGCCAAAUUAAAUUGAUACAGAACCCAUUUCUCAGAGUCUUUUUUUUUUUUUGAGACAGAGUCUCGCUGUUACCCAGGCUGGAGUGCAAUGGCGCAAACUUGGCUCACUGCAACCUCUGCCCCCUGGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCCGAGUAGCUGAGACUACAGGCACCUGCCACCAUACCCAGCUAAGUUAUGUAUUUUUAGUAGAGAUGGAGUUUCACCAUGUUGGCCAGGCUGGUCUCAAACUCCUGACCUCAGGUGAUCCACCUGCCUCAGCCUCCCAAAGUGCUGGGAUUACAGGCAUGAGUCAUUGCUCCCAGCCAUUAGAAAGAUUGUUAAUCCUAUGAACUCCCUUUUGUAGGAGAGAAAGGGCCAAUCUGUAGGGGUAGCCCUGUCCAGGUAAAGUUGUUUUCAGCCUCAUGUCUACUGUUAGGUGAGGGAGUCACAGCCAGACAGAGAGUAUUGCUGGAGGGUGAGAGAAUUGUGGAGACCAACUACCACAUAGCAAGAGCCCAGCUCUUGGGAGCAUUGAGAUGUAAGCUCAGGGUUACACAGUUCCAAAUCUUGGGAAGGGGCUUUUCAGACAGACUGUUUGCUUUCUGCUGAGAUAAGGAAUGCAUCACUCUGCCAGAGUAUGACUUUUUACAGAUUAUUAAAUAAAGCUGCAUAUGUCUCAUUGUUACCUGA
Sequence (MODOMICS CODE ENCODING)	GCGCCUCAGAGUUACUGAUUUAUUCUUGAGAUUCCUCUACUCUCGUUAUCUGACCUCAUGGAUGAACUUCAGGAUGUUCAGCUCACAGAGAUCAAACCACUUCUAAAUGAUAAGAAUGGUACAAGAAACUUCCAGGACUUUGACUGUCAGGAACAUGAUAUAGAAACAACUCAUGGUGUGGUCCACGUCACUAUAAGAGGCUUACCCAAAGGAAACAGACCAGUUAUACUAACAUAUCAUGACAUUGGCCUCAACCAUAAAUCCUGUUUCAAUGCAUUCU2000000009UUAACUUUGAGGAUAUGCAAGAGAUCACCCAGCACUUUGCUGUCUGUCAUGUGGAUGCCCCAGGCCAGCAGGAAGGUGCACCCUCUUUCCCAACAGGGUAUCAGUACCCCACAAUGGAUGAGCUGGCUGAAAUGCUGCCUCCUGUUCUUACCCACCUAAGCCUGAAAAGCAUCAUUGGAAUUGGAGUUGGAGCUGGAGCUUACA2000000009UCCUCAGCAGAU2000000009UUGCACUCAACCA2000000009UCCAGAGCUUGUGGAAGGCCUUGUGCUCAUUAAUGUUGACCCUUGCGCUAAAGGCUGGAUUGACUGGGCAGCUUCCAAACUCUCUGGCCUGACAACCAAUGUUGUGGACAUUAUUUUGGCUCAUCACUUUGGGCAGGAAGAGUUACAGGCCAACCUGGACCUGAUCCAAACCUAC2000000006AGAAUGCAUAUUGCCCAAGACAUCAACCAAGACAACCUGCAGCUCUUCUUGAAUUCCUACAAUGGACGCAGAGACCUGGAGAUCGAAAGACCCAUACUGGGCCAAAAUGAUAACAAAUCAAAAACAUUAAAGUGUUCUACU2000000009UUACUGGUGGUAGGGGACAAUUCGCCUGCAGUUGAGGCUGUGGUCGAAUGCAAUUCCCGCCUGAACCCUAUAAAUACAACUUUGCUAAAGAUGGCGGACUGUGGGGGACUGCCCCAGGUAGUUCAGCCUGGGAAGCUCACCGAGGCCUUCAAGUACUUUUUGCAGGGAAUGGGCUACAUCCCGUAUGUGCAGCUCAGUCACCUGAGCACCGAGUCAGUACCAUCUGCCAGCAUGACUCGGCUCGCCCGAUCACGAACCCACUCAACCUCGAGUAGCCUCGGCUCUGGAGAAAGUCCCUUCAGCCGGUCUGUCACCAGCAAUCAGUCAGAUGGAACUCAAGAAUCCUGUGAGUCCCCUGAUGUCCUGGACAGACACCAGACCAUGGAGGUGUCCUGCUAAGCAGAUGCUCCUCCCCUGGACCAUUGCAAGUCCAUCCUUCAAAUGACCACUCCAUAAUAUAACAUUUCAUCCAGUAAACUGGCCUCUACUAUCU2000000009UUAACUCAUGCAUGGCCACUGAACCUCUCUCUAGUAGCCUGGAUUUAUCAUUCUCUCUGCCUGCCCACCCCCUUUUUUGUAUAGCCCAAGAACCACUUCCAUGCCAUACUGUAACAUUCCAACAUCU2000000009UUAGCUGAUCAGAUCUCUCCAUAUCCUCUCUUGCCAGCUUUUUCCCGUGCUCCCCCAACUAUGUAUCAGAUAAGAUUCUUUGAUCCCGACUCUGUGUGUGCGAGCACGCGUGUCUGUGUUUGUGUGUGCAUAGUUCUGUGGUUUUAGACACGCUUUCUUGUAGUGCUUCUGCAAAAAACAAAAAAGGGACUUAUUUUGCAUUCUCAAUGGUGUUUUUAAGGGAAUUAGGCAGAACAGAUUUCUAGGUUGGGUAGGCCACUGCAUUCUCUUUUGUUUGCAAAUUGGUCAACAAAAUUUGCAAAGUGAUUUCAGGAGAGAGCAGCUUUGAGGAAUGUGGAAAAUCAUAAUUGCCGUCUGGACCAUUGAUUGAUUGUGACCAGUAGCAGAAGGGUGCCUGUUACAUAGAGAGGCUCCUUCUGUCCAAAUGAAUUUCUGUAUACUCUUCUAUAAAUAAAAGGGAGGAAUAUAUUCUGCUGGAAGCCCAUGAACCAUCGCUGAGGUUCUGAUACAACAUAGAGUUUUUUCCAAGGAGUGAAUGUGGUUUAAUUACUGG2000000006ACUCUCUUAGCACAGGAAGGUGGAAACAAAAUGCCAGGCCUCUGCUCUGAAGAGCAAAACUGCUGUCGCUGCAGUAUCUGAUACCAGACA2000000009UCCACAUAUCCACAAGAAGUGCCUCUUAGGUCUGUGACAGAGAGUGUGUCUCCAUUCCUCAGUUCCCAGAAAGGGGAGAGGUUUGGCCUAAAAAGCAUGUAGAUGGGGGAGAAAUGGGUGGGGGGAGAGGA2000000006ACAGCCAUUAACACAGUAUCAUGUUUAACAAGUAUAGCCUUGAUUUCAGUAGAUGUAAUGGAAGCCAAAUUAAAUUGAUACAGAACCCAUUUCUCAGAGUCUUUUUUUUUUUUUGAGACAGAGUCUCGCUGUUACCCAGGCUGGAGUGCAAUGGCGCAAACUUGGCUCACUGCAACCUCUGCCCCCUGGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCCGAGUAGCUGAGACUACAGGCACCUGCCACCAUACCCAGCUAAGUUAUGUAUUUUUAGUAGAGAUGGAGUUUCACCAUGUUGGCCAGGCUGGUCUCAAACUCCUGACCUCAGGUGAUCCACCUGCCUCAGCCUCCCAAAGUGCUGGGAUUACAGGCAUGAGUCAUUGCUCCCAGCCAUUAGAAAGAUUGUUAAUCCUAUGAACUCCCUUUUGUAGGAGAGAAAGGGCCAAUCUGUAGGGGUAGCCCUGUCCAGGUAAAGUUGUUUUCAGCCUCAUGUCUACUGUUAGGUGAGGGAGUCACAGCCAGACAGAGAGUAUUGCUGGAGGGUGAGAGAAUUGUGGAGACCAACUACCACAUAGCAAGAGCCCAGCUCUUGGGAGCAUUGAGAUGUAAGCUCAGGGUUACACAGUUCCAAAUCUUGGGAAGGGGCUUUUCAGACAGACUGUUUGCUUUCUGCUGAGAUAAGGAAUGCAUCACUCUGCCAGAGUAUGACUUUUUACAGAUUAUUAAAUAAAGCUGCAUAUGUCUCAUUGUUACCUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	281	485	497	510	685	826	1319	1446	1999	2089	2220
Modification Positions	Y	Y	Y	Y	m6A	Y	Y	Y	m6A	Y	m6A
Genomic Coordinates	20:36687588:-	20:36682534:-	20:36682522:-	20:36680894:-	20:36666353:-	20:36665087:-	20:36653425:-	20:36653298:-	20:36652745:-	20:36652655:-	20:36652524:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8