General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000372950
Gene ID:	ENSG00000213551
Gene Name:	DNAJC9
Sequence (UNICHARACTER ENCODING)	AGUCCUGGGUUGUACCCGGCGCAGCUGGGAGCGGCUGCUUCCPCCGGGGUCGUAUCUCCGCCCGGCAUGGGGCUGCUGGACCUUUGCGAGGAAGUGUUCGGCACCGCCGACCUPUACCGGGUGCUGGGCGUGCGACGCGAGGCCUCCGACGGCGAGGUCCGACGAGGCUACCACAAGGUGUCCCUGCAGGUACACCCGGACCGGGUGGGUGAGGGCGACAAGGAGGACGCCACCCGCCGCUUCCAGAUCCUGGGAAAAGUCUAUUCCGUUCUCAGUGACAGAGAACЖGAGAGCAGUGUACGAUGAGCAGGGAACAGUGGACGAGGACUCUCCUGUGCUCACCCAAGЖCCGAGACUGGGAGGCGUAUUGGCGGCUACUCUPUAAAAAGAUAUCUPUAGAGGACAUUCAAGCUUUUGAAAAGЖCAUACAAAGGUUCGGAAGAAGAGCUGGCUGAUAUUAAGCAGGCCUAUCUGGЖCUUCAAGGGUGACAUGGAUCAGAUCAUGGAGUCUGUGCUUUGCGUGCAGUACACAGAGGAACCCAGGAUAAGGAAUAUCAUUCAGCAAGCUAUUGACGCCGGAGAGGUCCCAPCCUAUAAUGCCUUUGUCAAAGAAUCGAAЖCAAAAGAUGAAUGCAAGGAAAAGGAGGGCUCAGGAAGAGGCCAAAGAAGCAGAAAUGAGCAGAAAGGAGUUGGGGCUUGAUGAAGGCGUGGAUAGCCUGAAGGCAGCCAUUCAGAGCAGACAAAAGGAUCGGCAAAAGGAAAUGGЖCAAUUUUCUGGCUCAGAUGGAAGCAAAGUACUGCAAAUCUUCCAAAGGAGGAGGGAAAAAAUCUGCUCUCAAGAAAGAAAAGAAAUAAUGGAAUUUUUCUCUUCAAAGGUCCUUAGGUGUAAAUUGAUGCCAUCGUAGGCAAGGUGCAGGCAGGAUPUGAAGGCAAAAGUCAAUUCAGCUCUUGAGAAAAGGUGUCUUUCCAGCCUGAAUUUUUCAGAUUGACUAGACCAAGCAGAAUCUCUCAACCUGAUCUUAGUAUUUCCUAGAAAGCACUUGACAUUGUGUGAGGUCUCACCUGAAGGAЖCUUGGUGGUGACAUUUGGGAGGGUGGAGGGAGGCAGUGUCCUUCCUGACAGCACUUGCCUCCAUGGAUCUUCUGUACACAGAACUCUUAUCUAGGAUGUGGUUCUGUUCAUGCUGCUUUCUGCGAUGUGCGUGUCUGUUAGAAUAGGCUCUCUACCCAGCUAGAACACCUUCCAGACACUUGCUGGACAGCUAUCUUCCACAUACUUCCCAGUUUACAUUUGGUCUUAAUGAUCUUGAAUAGAUCCUCUCUUCAUUUUACUCAGCCAGGUUUUGUACUGAUGUACAGGUGUUAAAUUACUUCAAGCAUUUUUGUAAGAGGUGUAUAUAAUUCAAUAAAAAAGGUAAAACAUGAUGAUUAAGUUCUGGGGGCUUUGUAAAUGAUCCCACUAAAAUGUGACCUAGGAAAAAUAUGAAUGGUGUUUAGGAUGAGAGAAAAGGGGAAAACAAUAGCCCUGGUCAGCUPUAUAAUAGAGAGCCUGGUUUCCCUAGCAUGAAGAGAUGUAUGUUGUAGUCCUGCCACUGAUUACUGAAGUCCUGCCAUUAAUUGCUGAAUGUCUUCAGUUGGGCCACUGAGCUUGUCUGAAUCUGUUCCCUUUUAUAAAAGAGUUACUACAUCAAAACAAAGAGUGAAAUCCAAAUUUGUCAAACUGUAUGUAUUAAЖCAUGUCCAGUUUUUUGGUUAAAAAAAAAUUGCACUGGCUUUGAGGGAAAACACACAGGGUGAGGGAAUUGGGCUAAAUGACUUCUUACAGGCCCCUUUCUGAUUCUPUAЖCUUUGAAAGGCAAGCCAUAUUGAUCCAGUUGUUAUAGUGAACUCAUGGUAAUGGUUUGUGAGAACAAUAGAGAUUUUCAUUUCUAUGUAGAUGAGUUGGUAUGAGAAUAUAUGGAAUUUUUAAGGGACUGUUUAAAUCUUUGAUUUGUAGACUAUUAAAUAUACCGUAUGCAUAAAGUAAGCCUPUAGCUCUAAGGUAAAGACGACACGUUUUCGGUUUGUGACUACAAAUAGGUUAAAAAUAGAUUUUAAUUUUAUUAAAAAUAUAAUUUAAUGCAGGUUGUUUGAAGCAUCUGUCUUCAUAUGAUGGCAUUAGAACACCUUGGUAUAAUAAAAAGUUACCGUAAUUUAUGAUUAUUUGAAUUUAUCCAUUCUGAAAAUUAAUAAGAUCUAAAACUGGCAUGACAAUCAAGAUUUGUAUUUAGUGAAAUUUAAAAUAAAUGUAAGCCAUAGUUAAAA
Sequence (SHORT NAMES ENCODING)	AGUCCUGGGUUGUACCCGGCGCAGCUGGGAGCGGCUGCUUCCYCCGGGGUCGUAUCUCCGCCCGGCAUGGGGCUGCUGGACCUUUGCGAGGAAGUGUUCGGCACCGCCGACCUYUACCGGGUGCUGGGCGUGCGACGCGAGGCCUCCGACGGCGAGGUCCGACGAGGCUACCACAAGGUGUCCCUGCAGGUACACCCGGACCGGGUGGGUGAGGGCGACAAGGAGGACGCCACCCGCCGCUUCCAGAUCCUGGGAAAAGUCUAUUCCGUUCUCAGUGACAGAGAACm6AGAGAGCAGUGUACGAUGAGCAGGGAACAGUGGACGAGGACUCUCCUGUGCUCACCCAAGm6ACCGAGACUGGGAGGCGUAUUGGCGGCUACUCUYUAAAAAGAUAUCUYUAGAGGACAUUCAAGCUUUUGAAAAGm6ACAUACAAAGGUUCGGAAGAAGAGCUGGCUGAUAUUAAGCAGGCCUAUCUGGm6ACUUCAAGGGUGACAUGGAUCAGAUCAUGGAGUCUGUGCUUUGCGUGCAGUACACAGAGGAACCCAGGAUAAGGAAUAUCAUUCAGCAAGCUAUUGACGCCGGAGAGGUCCCAYCCUAUAAUGCCUUUGUCAAAGAAUCGAAm6ACAAAAGAUGAAUGCAAGGAAAAGGAGGGCUCAGGAAGAGGCCAAAGAAGCAGAAAUGAGCAGAAAGGAGUUGGGGCUUGAUGAAGGCGUGGAUAGCCUGAAGGCAGCCAUUCAGAGCAGACAAAAGGAUCGGCAAAAGGAAAUGGm6ACAAUUUUCUGGCUCAGAUGGAAGCAAAGUACUGCAAAUCUUCCAAAGGAGGAGGGAAAAAAUCUGCUCUCAAGAAAGAAAAGAAAUAAUGGAAUUUUUCUCUUCAAAGGUCCUUAGGUGUAAAUUGAUGCCAUCGUAGGCAAGGUGCAGGCAGGAUYUGAAGGCAAAAGUCAAUUCAGCUCUUGAGAAAAGGUGUCUUUCCAGCCUGAAUUUUUCAGAUUGACUAGACCAAGCAGAAUCUCUCAACCUGAUCUUAGUAUUUCCUAGAAAGCACUUGACAUUGUGUGAGGUCUCACCUGAAGGAm6ACUUGGUGGUGACAUUUGGGAGGGUGGAGGGAGGCAGUGUCCUUCCUGACAGCACUUGCCUCCAUGGAUCUUCUGUACACAGAACUCUUAUCUAGGAUGUGGUUCUGUUCAUGCUGCUUUCUGCGAUGUGCGUGUCUGUUAGAAUAGGCUCUCUACCCAGCUAGAACACCUUCCAGACACUUGCUGGACAGCUAUCUUCCACAUACUUCCCAGUUUACAUUUGGUCUUAAUGAUCUUGAAUAGAUCCUCUCUUCAUUUUACUCAGCCAGGUUUUGUACUGAUGUACAGGUGUUAAAUUACUUCAAGCAUUUUUGUAAGAGGUGUAUAUAAUUCAAUAAAAAAGGUAAAACAUGAUGAUUAAGUUCUGGGGGCUUUGUAAAUGAUCCCACUAAAAUGUGACCUAGGAAAAAUAUGAAUGGUGUUUAGGAUGAGAGAAAAGGGGAAAACAAUAGCCCUGGUCAGCUYUAUAAUAGAGAGCCUGGUUUCCCUAGCAUGAAGAGAUGUAUGUUGUAGUCCUGCCACUGAUUACUGAAGUCCUGCCAUUAAUUGCUGAAUGUCUUCAGUUGGGCCACUGAGCUUGUCUGAAUCUGUUCCCUUUUAUAAAAGAGUUACUACAUCAAAACAAAGAGUGAAAUCCAAAUUUGUCAAACUGUAUGUAUUAAm6ACAUGUCCAGUUUUUUGGUUAAAAAAAAAUUGCACUGGCUUUGAGGGAAAACACACAGGGUGAGGGAAUUGGGCUAAAUGACUUCUUACAGGCCCCUUUCUGAUUCUYUAm6ACUUUGAAAGGCAAGCCAUAUUGAUCCAGUUGUUAUAGUGAACUCAUGGUAAUGGUUUGUGAGAACAAUAGAGAUUUUCAUUUCUAUGUAGAUGAGUUGGUAUGAGAAUAUAUGGAAUUUUUAAGGGACUGUUUAAAUCUUUGAUUUGUAGACUAUUAAAUAUACCGUAUGCAUAAAGUAAGCCUYUAGCUCUAAGGUAAAGACGACACGUUUUCGGUUUGUGACUACAAAUAGGUUAAAAAUAGAUUUUAAUUUUAUUAAAAAUAUAAUUUAAUGCAGGUUGUUUGAAGCAUCUGUCUUCAUAUGAUGGCAUUAGAACACCUUGGUAUAAUAAAAAGUUACCGUAAUUUAUGAUUAUUUGAAUUUAUCCAUUCUGAAAAUUAAUAAGAUCUAAAACUGGCAUGACAAUCAAGAUUUGUAUUUAGUGAAAUUUAAAAUAAAUGUAAGCCAUAGUUAAAA
Sequence (MODOMICS CODE ENCODING)	AGUCCUGGGUUGUACCCGGCGCAGCUGGGAGCGGCUGCUUCC2000000009UCCGGGGUCGUAUCUCCGCCCGGCAUGGGGCUGCUGGACCUUUGCGAGGAAGUGUUCGGCACCGCCGACCU2000000009UUACCGGGUGCUGGGCGUGCGACGCGAGGCCUCCGACGGCGAGGUCCGACGAGGCUACCACAAGGUGUCCCUGCAGGUACACCCGGACCGGGUGGGUGAGGGCGACAAGGAGGACGCCACCCGCCGCUUCCAGAUCCUGGGAAAAGUCUAUUCCGUUCUCAGUGACAGAGAAC2000000006AGAGAGCAGUGUACGAUGAGCAGGGAACAGUGGACGAGGACUCUCCUGUGCUCACCCAAG2000000006ACCGAGACUGGGAGGCGUAUUGGCGGCUACUCU2000000009UUAAAAAGAUAUCU2000000009UUAGAGGACAUUCAAGCUUUUGAAAAG2000000006ACAUACAAAGGUUCGGAAGAAGAGCUGGCUGAUAUUAAGCAGGCCUAUCUGG2000000006ACUUCAAGGGUGACAUGGAUCAGAUCAUGGAGUCUGUGCUUUGCGUGCAGUACACAGAGGAACCCAGGAUAAGGAAUAUCAUUCAGCAAGCUAUUGACGCCGGAGAGGUCCCA2000000009UCCUAUAAUGCCUUUGUCAAAGAAUCGAA2000000006ACAAAAGAUGAAUGCAAGGAAAAGGAGGGCUCAGGAAGAGGCCAAAGAAGCAGAAAUGAGCAGAAAGGAGUUGGGGCUUGAUGAAGGCGUGGAUAGCCUGAAGGCAGCCAUUCAGAGCAGACAAAAGGAUCGGCAAAAGGAAAUGG2000000006ACAAUUUUCUGGCUCAGAUGGAAGCAAAGUACUGCAAAUCUUCCAAAGGAGGAGGGAAAAAAUCUGCUCUCAAGAAAGAAAAGAAAUAAUGGAAUUUUUCUCUUCAAAGGUCCUUAGGUGUAAAUUGAUGCCAUCGUAGGCAAGGUGCAGGCAGGAU2000000009UUGAAGGCAAAAGUCAAUUCAGCUCUUGAGAAAAGGUGUCUUUCCAGCCUGAAUUUUUCAGAUUGACUAGACCAAGCAGAAUCUCUCAACCUGAUCUUAGUAUUUCCUAGAAAGCACUUGACAUUGUGUGAGGUCUCACCUGAAGGA2000000006ACUUGGUGGUGACAUUUGGGAGGGUGGAGGGAGGCAGUGUCCUUCCUGACAGCACUUGCCUCCAUGGAUCUUCUGUACACAGAACUCUUAUCUAGGAUGUGGUUCUGUUCAUGCUGCUUUCUGCGAUGUGCGUGUCUGUUAGAAUAGGCUCUCUACCCAGCUAGAACACCUUCCAGACACUUGCUGGACAGCUAUCUUCCACAUACUUCCCAGUUUACAUUUGGUCUUAAUGAUCUUGAAUAGAUCCUCUCUUCAUUUUACUCAGCCAGGUUUUGUACUGAUGUACAGGUGUUAAAUUACUUCAAGCAUUUUUGUAAGAGGUGUAUAUAAUUCAAUAAAAAAGGUAAAACAUGAUGAUUAAGUUCUGGGGGCUUUGUAAAUGAUCCCACUAAAAUGUGACCUAGGAAAAAUAUGAAUGGUGUUUAGGAUGAGAGAAAAGGGGAAAACAAUAGCCCUGGUCAGCU2000000009UUAUAAUAGAGAGCCUGGUUUCCCUAGCAUGAAGAGAUGUAUGUUGUAGUCCUGCCACUGAUUACUGAAGUCCUGCCAUUAAUUGCUGAAUGUCUUCAGUUGGGCCACUGAGCUUGUCUGAAUCUGUUCCCUUUUAUAAAAGAGUUACUACAUCAAAACAAAGAGUGAAAUCCAAAUUUGUCAAACUGUAUGUAUUAA2000000006ACAUGUCCAGUUUUUUGGUUAAAAAAAAAUUGCACUGGCUUUGAGGGAAAACACACAGGGUGAGGGAAUUGGGCUAAAUGACUUCUUACAGGCCCCUUUCUGAUUCU2000000009UUA2000000006ACUUUGAAAGGCAAGCCAUAUUGAUCCAGUUGUUAUAGUGAACUCAUGGUAAUGGUUUGUGAGAACAAUAGAGAUUUUCAUUUCUAUGUAGAUGAGUUGGUAUGAGAAUAUAUGGAAUUUUUAAGGGACUGUUUAAAUCUUUGAUUUGUAGACUAUUAAAUAUACCGUAUGCAUAAAGUAAGCCU2000000009UUAGCUCUAAGGUAAAGACGACACGUUUUCGGUUUGUGACUACAAAUAGGUUAAAAAUAGAUUUUAAUUUUAUUAAAAAUAUAAUUUAAUGCAGGUUGUUUGAAGCAUCUGUCUUCAUAUGAUGGCAUUAGAACACCUUGGUAUAAUAAAAAGUUACCGUAAUUUAUGAUUAUUUGAAUUUAUCCAUUCUGAAAAUUAAUAAGAUCUAAAACUGGCAUGACAAUCAAGAUUUGUAUUUAGUGAAAUUUAAAAUAAAUGUAAGCCAUAGUUAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	43	114	287	347	380	394	421	473	586	615	761	918	1065	1529	1727	1834	1837	2022
Modification Positions	Y	Y	m6A	m6A	Y	Y	m6A	m6A	Y	m6A	m6A	Y	m6A	Y	m6A	Y	m6A	Y
Genomic Coordinates	10:73247213:-	10:73247142:-	10:73246788:-	10:73246728:-	10:73246695:-	10:73246170:-	10:73246143:-	10:73246091:-	10:73245978:-	10:73245949:-	10:73243488:-	10:73243331:-	10:73243184:-	10:73242720:-	10:73242522:-	10:73242415:-	10:73242412:-	10:73242227:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL	ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	VyCX26p5UBRL 8cMbzB4aD5Se BkoLW2CBToyL KTLz8piFYdwC 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp