General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000682712
Gene ID:	ENSG00000130640
Gene Name:	TUBGCP2
Sequence (UNICHARACTER ENCODING)	AUGAGAGЖCCUGCCCUGAUCGGGGAUUUCCUGAUUGGUGCUGGCAUCAGCACAGACACCGCUUUGCCGAUAGACUUGAGAAUGGAGCUCACUGUGGUGUUCAUGCCGGGGCCUGUCUAGCUCCUCACCCCACGAUUUGACCAGUGCCACACCACGGGЖCCUUGUGUGACCUCGGGCCUGCGUCCUCUGGAAAACAGCUGUGGAGUGGUGUGAUGAGGACAGGUGCCUUGGAAAGCAUCAGGACCUUGUGAGCACGAGGCAGCUGCCAGCACUCCACGUUCCCGCCAUGCUCUCCUCACCGUGUGGGCAUCCACCUGGCCAGCGCCGCCUCCGCAGUGCCCCUCCCUCUGGUCGCUCCCGCGCAGCAUGCGAAGGUGUUAUCUGCCCGCGUCCUGCCUUUUCCCCACACCGGCACGGAGGAGCCACGUGUUCGGUGGUCGUUCGGACGUGGUGAUUUGCAGGGUCUCACUUCGUUGCCUAGGCUGGAGUGCAGUGGCACAAUCUCAGCUCACUGCAGCCUCGACCUCCCAAGCUCAGUAGAGACGGGGAUUCGCCGUGUUGCCCAGGCUGGUCUUGAACUCCUGGAGUCAAGCGAUCUGUCCACCUUGGCCUCCUAAAGUGAUGGGAUUACAGGCACGUUGCCCCUGGCCUCGCAGGAGUCGGCCGUGGUGGAGGACCUGCUGUACGUGCUGGUGGGCGUGGACGGGAGGUACGUCAGUGCUCAGCCCCUGGCUGGGAGGCAGAGCCGGACCUUCCUCGUGGACCCCAACCUGGACCUGUCCAUCAGGGAGCUGGUGCACAGGAUCCUCCCAGUGGCCGCCAGCUACUCCGCUGUGACCAGGUUCAUUGAAGAGAAGUCUUCCUUCGAGUACGGGCAGGUGAЖCCACGCCCUGGCGGCCGCCAUGCGCACCCUGGUGAAGGAGCACCUGAUUCUGGUGUCACAGCUGGAGCAGCUGCACAGGCAGGGCCUCCUUUCGCUGCAGAAGCUCUGGUUCUACAPCCAGCCAGCCAUGCGCACCAUGGACAPCCUGGCCUCCCUCGCCACCUCGGUGGACAAAGGCGAAUGUCUUGGGGGGUCCACGCUGAGCCUGCUCCACGACAGGAGCUUCAGCUACACAGGGGACAGCCAGGCGCAGGAGCUAUGCCUGUACCUAACCAAGGCGGCCAGUGCUCCCUACUUCGAGGUUCUGGAGAAGUGGAUCUACAGGGGCAUCAPCCACGACCCAUACAGUGAGUUUAUGGUCGAGGAGCACGAGCUGCGGAAGGAGAGGAUCCAGGAGGAUUACAACGACAAGUACUGGGACCAGCGGUACACCAUCGUCCAGCAGCAGAUCCCGUCCUUCCUGCAGAAAAUGGCGGACAAGAUCCUCAGCACAGGAAAAUAUCUAAAUGUGGUCAGAGAGUGUGGCCAUGACGUCACCUGCCCGGUGGCUAAAGAGAUCAUCUACACGUUAAAAGAGCGGGCGUAUGUGGAGCAGAUCGAGAAGGCGUUUAЖCUACGCCAGCAAGGUGCUGCUGGACUUCCUGAUGGAGGAGAAGGAGCUGGUGGCUCACCUCAGGUCCAUCAAGCGCUACUUCCUCAUGGACCAGGGCGACUUCUUCGUGCACUUCAUGGACCUCGCGGAGGAGGAGCUCCGGAAGCCGGUGGAGGACAUCACGCCCCCUCGCCUGGAAGCGCUCCUGGAGCUGGCGCUGCGCAUGAGCACGGCCAACACUGACCCCUUCAAGGACGACCUCAAGAUCGACCUGAUGCCCCAUGACCUCAUCACUCAGCUCUUGCGCGUCCUGGCCAUCGAGACCAAGCAGGAGAAGGCGAUGGCGCACGCCGACCCCACGGAGCUGGCGCUGAGCGGCCUGGAGGCCUUCUCUUUCGACUACAUCGUCAAGUGGCCCCUUUCGCUCAUCAUCAACAGGAAAGCCCUCACUCGCUACCAGAUGCUCUUCAGGCACAUGUUCUACUGCAAGCACGUGGAGCGGCAGCUCUGCAGCGUCUGGAUCAGCAACAAAACCGCCAAGCAGCACUCGCUGCACUCCGCCCAGUGGUUUGCUGGGGCUUUCACUCUGCGGCAGCGAAUGCUCAACUUCGUCCAGAAUAUUCAAUACUACAUGAUGUUUGAAGUGAUGGЖACCGACCUGGCACAPCCUGGAGAAAAACCUGAAAUCCGCCUCCAACAUUGACGACGUCCUUGGCCACCACACAGGCUUCCUGGACACCUGCCUGAAGGACUGCAUGCUCACCAACCCCGAGCUGCUGAAGGUCUUCUCCAAGCUCAUGUCUGUGUGCGUCAUGUUCACCAACUGCAUGCAGAAAUUUACACAGAGCAUGAAAUUAGAUGGCGAGCUGGGCGGGCAGACGCUGGAGCACAGCACCGUCCUGGGGCUGCCCGCAGGGGCCGAGGAGCGGGCCCGGAAGGAGCUCGCCAGGAAGCACCUGGCUGAGCACGCAGACACUGUGCAGCUGGUGUCCGGCUUCGAGGCCACCAUCAA?AAGUUUGACAAGAACUUCUCAGCCCACCUGCUGGACCUCCUGGCCCGGCUGAGCAUCUAUAGCACCAGUGACUGUGAGCACGGCAUGGCCAGCGUCAUCUCCAGGCUUGACUUCAAUGGUUUCUACACGGAGCGCCUGGAGCGCCUGUCUGCAGAGAGGAGCCAGAAGGCCACCCCCCAAGUGC
Sequence (SHORT NAMES ENCODING)	AUGAGAGm6ACCUGCCCUGAUCGGGGAUUUCCUGAUUGGUGCUGGCAUCAGCACAGACACCGCUUUGCCGAUAGACUUGAGAAUGGAGCUCACUGUGGUGUUCAUGCCGGGGCCUGUCUAGCUCCUCACCCCACGAUUUGACCAGUGCCACACCACGGGm6ACCUUGUGUGACCUCGGGCCUGCGUCCUCUGGAAAACAGCUGUGGAGUGGUGUGAUGAGGACAGGUGCCUUGGAAAGCAUCAGGACCUUGUGAGCACGAGGCAGCUGCCAGCACUCCACGUUCCCGCCAUGCUCUCCUCACCGUGUGGGCAUCCACCUGGCCAGCGCCGCCUCCGCAGUGCCCCUCCCUCUGGUCGCUCCCGCGCAGCAUGCGAAGGUGUUAUCUGCCCGCGUCCUGCCUUUUCCCCACACCGGCACGGAGGAGCCACGUGUUCGGUGGUCGUUCGGACGUGGUGAUUUGCAGGGUCUCACUUCGUUGCCUAGGCUGGAGUGCAGUGGCACAAUCUCAGCUCACUGCAGCCUCGACCUCCCAAGCUCAGUAGAGACGGGGAUUCGCCGUGUUGCCCAGGCUGGUCUUGAACUCCUGGAGUCAAGCGAUCUGUCCACCUUGGCCUCCUAAAGUGAUGGGAUUACAGGCACGUUGCCCCUGGCCUCGCAGGAGUCGGCCGUGGUGGAGGACCUGCUGUACGUGCUGGUGGGCGUGGACGGGAGGUACGUCAGUGCUCAGCCCCUGGCUGGGAGGCAGAGCCGGACCUUCCUCGUGGACCCCAACCUGGACCUGUCCAUCAGGGAGCUGGUGCACAGGAUCCUCCCAGUGGCCGCCAGCUACUCCGCUGUGACCAGGUUCAUUGAAGAGAAGUCUUCCUUCGAGUACGGGCAGGUGAm6ACCACGCCCUGGCGGCCGCCAUGCGCACCCUGGUGAAGGAGCACCUGAUUCUGGUGUCACAGCUGGAGCAGCUGCACAGGCAGGGCCUCCUUUCGCUGCAGAAGCUCUGGUUCUACAYCCAGCCAGCCAUGCGCACCAUGGACAYCCUGGCCUCCCUCGCCACCUCGGUGGACAAAGGCGAAUGUCUUGGGGGGUCCACGCUGAGCCUGCUCCACGACAGGAGCUUCAGCUACACAGGGGACAGCCAGGCGCAGGAGCUAUGCCUGUACCUAACCAAGGCGGCCAGUGCUCCCUACUUCGAGGUUCUGGAGAAGUGGAUCUACAGGGGCAUCAYCCACGACCCAUACAGUGAGUUUAUGGUCGAGGAGCACGAGCUGCGGAAGGAGAGGAUCCAGGAGGAUUACAACGACAAGUACUGGGACCAGCGGUACACCAUCGUCCAGCAGCAGAUCCCGUCCUUCCUGCAGAAAAUGGCGGACAAGAUCCUCAGCACAGGAAAAUAUCUAAAUGUGGUCAGAGAGUGUGGCCAUGACGUCACCUGCCCGGUGGCUAAAGAGAUCAUCUACACGUUAAAAGAGCGGGCGUAUGUGGAGCAGAUCGAGAAGGCGUUUAm6ACUACGCCAGCAAGGUGCUGCUGGACUUCCUGAUGGAGGAGAAGGAGCUGGUGGCUCACCUCAGGUCCAUCAAGCGCUACUUCCUCAUGGACCAGGGCGACUUCUUCGUGCACUUCAUGGACCUCGCGGAGGAGGAGCUCCGGAAGCCGGUGGAGGACAUCACGCCCCCUCGCCUGGAAGCGCUCCUGGAGCUGGCGCUGCGCAUGAGCACGGCCAACACUGACCCCUUCAAGGACGACCUCAAGAUCGACCUGAUGCCCCAUGACCUCAUCACUCAGCUCUUGCGCGUCCUGGCCAUCGAGACCAAGCAGGAGAAGGCGAUGGCGCACGCCGACCCCACGGAGCUGGCGCUGAGCGGCCUGGAGGCCUUCUCUUUCGACUACAUCGUCAAGUGGCCCCUUUCGCUCAUCAUCAACAGGAAAGCCCUCACUCGCUACCAGAUGCUCUUCAGGCACAUGUUCUACUGCAAGCACGUGGAGCGGCAGCUCUGCAGCGUCUGGAUCAGCAACAAAACCGCCAAGCAGCACUCGCUGCACUCCGCCCAGUGGUUUGCUGGGGCUUUCACUCUGCGGCAGCGAAUGCUCAACUUCGUCCAGAAUAUUCAAUACUACAUGAUGUUUGAAGUGAUGGm6AACCGACCUGGCACAYCCUGGAGAAAAACCUGAAAUCCGCCUCCAACAUUGACGACGUCCUUGGCCACCACACAGGCUUCCUGGACACCUGCCUGAAGGACUGCAUGCUCACCAACCCCGAGCUGCUGAAGGUCUUCUCCAAGCUCAUGUCUGUGUGCGUCAUGUUCACCAACUGCAUGCAGAAAUUUACACAGAGCAUGAAAUUAGAUGGCGAGCUGGGCGGGCAGACGCUGGAGCACAGCACCGUCCUGGGGCUGCCCGCAGGGGCCGAGGAGCGGGCCCGGAAGGAGCUCGCCAGGAAGCACCUGGCUGAGCACGCAGACACUGUGCAGCUGGUGUCCGGCUUCGAGGCCACCAUCAAm5CAAGUUUGACAAGAACUUCUCAGCCCACCUGCUGGACCUCCUGGCCCGGCUGAGCAUCUAUAGCACCAGUGACUGUGAGCACGGCAUGGCCAGCGUCAUCUCCAGGCUUGACUUCAAUGGUUUCUACACGGAGCGCCUGGAGCGCCUGUCUGCAGAGAGGAGCCAGAAGGCCACCCCCCAAGUGC
Sequence (MODOMICS CODE ENCODING)	AUGAGAG2000000006ACCUGCCCUGAUCGGGGAUUUCCUGAUUGGUGCUGGCAUCAGCACAGACACCGCUUUGCCGAUAGACUUGAGAAUGGAGCUCACUGUGGUGUUCAUGCCGGGGCCUGUCUAGCUCCUCACCCCACGAUUUGACCAGUGCCACACCACGGG2000000006ACCUUGUGUGACCUCGGGCCUGCGUCCUCUGGAAAACAGCUGUGGAGUGGUGUGAUGAGGACAGGUGCCUUGGAAAGCAUCAGGACCUUGUGAGCACGAGGCAGCUGCCAGCACUCCACGUUCCCGCCAUGCUCUCCUCACCGUGUGGGCAUCCACCUGGCCAGCGCCGCCUCCGCAGUGCCCCUCCCUCUGGUCGCUCCCGCGCAGCAUGCGAAGGUGUUAUCUGCCCGCGUCCUGCCUUUUCCCCACACCGGCACGGAGGAGCCACGUGUUCGGUGGUCGUUCGGACGUGGUGAUUUGCAGGGUCUCACUUCGUUGCCUAGGCUGGAGUGCAGUGGCACAAUCUCAGCUCACUGCAGCCUCGACCUCCCAAGCUCAGUAGAGACGGGGAUUCGCCGUGUUGCCCAGGCUGGUCUUGAACUCCUGGAGUCAAGCGAUCUGUCCACCUUGGCCUCCUAAAGUGAUGGGAUUACAGGCACGUUGCCCCUGGCCUCGCAGGAGUCGGCCGUGGUGGAGGACCUGCUGUACGUGCUGGUGGGCGUGGACGGGAGGUACGUCAGUGCUCAGCCCCUGGCUGGGAGGCAGAGCCGGACCUUCCUCGUGGACCCCAACCUGGACCUGUCCAUCAGGGAGCUGGUGCACAGGAUCCUCCCAGUGGCCGCCAGCUACUCCGCUGUGACCAGGUUCAUUGAAGAGAAGUCUUCCUUCGAGUACGGGCAGGUGA2000000006ACCACGCCCUGGCGGCCGCCAUGCGCACCCUGGUGAAGGAGCACCUGAUUCUGGUGUCACAGCUGGAGCAGCUGCACAGGCAGGGCCUCCUUUCGCUGCAGAAGCUCUGGUUCUACA2000000009UCCAGCCAGCCAUGCGCACCAUGGACA2000000009UCCUGGCCUCCCUCGCCACCUCGGUGGACAAAGGCGAAUGUCUUGGGGGGUCCACGCUGAGCCUGCUCCACGACAGGAGCUUCAGCUACACAGGGGACAGCCAGGCGCAGGAGCUAUGCCUGUACCUAACCAAGGCGGCCAGUGCUCCCUACUUCGAGGUUCUGGAGAAGUGGAUCUACAGGGGCAUCA2000000009UCCACGACCCAUACAGUGAGUUUAUGGUCGAGGAGCACGAGCUGCGGAAGGAGAGGAUCCAGGAGGAUUACAACGACAAGUACUGGGACCAGCGGUACACCAUCGUCCAGCAGCAGAUCCCGUCCUUCCUGCAGAAAAUGGCGGACAAGAUCCUCAGCACAGGAAAAUAUCUAAAUGUGGUCAGAGAGUGUGGCCAUGACGUCACCUGCCCGGUGGCUAAAGAGAUCAUCUACACGUUAAAAGAGCGGGCGUAUGUGGAGCAGAUCGAGAAGGCGUUUA2000000006ACUACGCCAGCAAGGUGCUGCUGGACUUCCUGAUGGAGGAGAAGGAGCUGGUGGCUCACCUCAGGUCCAUCAAGCGCUACUUCCUCAUGGACCAGGGCGACUUCUUCGUGCACUUCAUGGACCUCGCGGAGGAGGAGCUCCGGAAGCCGGUGGAGGACAUCACGCCCCCUCGCCUGGAAGCGCUCCUGGAGCUGGCGCUGCGCAUGAGCACGGCCAACACUGACCCCUUCAAGGACGACCUCAAGAUCGACCUGAUGCCCCAUGACCUCAUCACUCAGCUCUUGCGCGUCCUGGCCAUCGAGACCAAGCAGGAGAAGGCGAUGGCGCACGCCGACCCCACGGAGCUGGCGCUGAGCGGCCUGGAGGCCUUCUCUUUCGACUACAUCGUCAAGUGGCCCCUUUCGCUCAUCAUCAACAGGAAAGCCCUCACUCGCUACCAGAUGCUCUUCAGGCACAUGUUCUACUGCAAGCACGUGGAGCGGCAGCUCUGCAGCGUCUGGAUCAGCAACAAAACCGCCAAGCAGCACUCGCUGCACUCCGCCCAGUGGUUUGCUGGGGCUUUCACUCUGCGGCAGCGAAUGCUCAACUUCGUCCAGAAUAUUCAAUACUACAUGAUGUUUGAAGUGAUGG2000000006AACCGACCUGGCACA2000000009UCCUGGAGAAAAACCUGAAAUCCGCCUCCAACAUUGACGACGUCCUUGGCCACCACACAGGCUUCCUGGACACCUGCCUGAAGGACUGCAUGCUCACCAACCCCGAGCUGCUGAAGGUCUUCUCCAAGCUCAUGUCUGUGUGCGUCAUGUUCACCAACUGCAUGCAGAAAUUUACACAGAGCAUGAAAUUAGAUGGCGAGCUGGGCGGGCAGACGCUGGAGCACAGCACCGUCCUGGGGCUGCCCGCAGGGGCCGAGGAGCGGGCCCGGAAGGAGCUCGCCAGGAAGCACCUGGCUGAGCACGCAGACACUGUGCAGCUGGUGUCCGGCUUCGAGGCCACCAUCAA2000000005CAAGUUUGACAAGAACUUCUCAGCCCACCUGCUGGACCUCCUGGCCCGGCUGAGCAUCUAUAGCACCAGUGACUGUGAGCACGGCAUGGCCAGCGUCAUCUCCAGGCUUGACUUCAAUGGUUUCUACACGGAGCGCCUGGAGCGCCUGUCUGCAGAGAGGAGCCAGAAGGCCACCCCCCAAGUGC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	8	158	882	999	1026	1215	1494	2124	2139	2485
Modification Positions	m6A	m6A	m6A	Y	Y	Y	m6A	m6A	Y	m5C
Genomic Coordinates	10:133298016:-	10:133295826:-	10:133293197:-	10:133293080:-	10:133293053:-	10:133292514:-	10:133288903:-	10:133283919:-	10:133283904:-	10:133281377:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4RW3xrzJ5VQa Er3yHVFp6tX8 JBTYPMm6qNsy KyXZuxKVckYS 4Hod8ruppnD2 5tjPWDS39J3i 9De2LACts9mj BnpqjwVeTStU bvmqLAbo2zqf mNhhJTdKpjtR