General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000403870
Gene ID:	ENSG00000107443
Gene Name:	CCNJ
Sequence (UNICHARACTER ENCODING)	CGUGCGGGAUGCUGACCGUACCCAGGCGGGAGCCGCCGCGCCGCCGCCUGGCGCUGCACCUGGGCCCGGCCCGGCCGCCAAUUGGACGGCUCGGGGCGACCCCGCUGUAUCGCGAGACGAGAUUGGCAGCGGCGGGGCCUCAAGUGCCCCCGCGCUGGCUUUGUAUGCGGAGCCGCCUGCCGGUCCUUUAACAAUGGGCGGCGCGAGCGUCCAGGCGCUGGGCUCUAGCUGAGGCCGGCGCUUAGCGGCCCACUGUCCGCAGCAUGAGCGGGGCCGGCGUCCGCCGCACGACGGCGGGGCUGGGGCUGUGAGGGCCGCGGUUCCGGACUCGAGUUGCCGCGUCGGGCUGGGCGCGCCGCCGGGUCCCAUGGAGCUGGAGGGGCAGUGGUGGCGAGGACAGCUGGCCGCCGAUAUUCACCAAGCGCUUCGCUACAAGGAGCUGAAGUUGCCCUCCUAUAAAGGCCAGUCCCCUCAGUUAAGUCUCAGACGGUAUUUUGCUGACUUGAUUGCCAUUGUGAGCAAUCGCUUCACACUCUGCCCUUCUGCCCGCCAUCUUGCUGUCUAUUUACUGGACCUGUUUAUGGACCGCUAUGACAUCUCUAUCCAGCAGCUGCAUUUAGUUGCGCUUUCCUGCCUGCUUCUAGCAAGUAAAUUUGAAGAAAAAGAAGACAGUGUGCCUAAGCUGGAGCAGCUCAACAGCCUGGGUUGUAUGACUAAUAUGAAUCUAGUAUUAACAAAACAAAAUUUGCUACAUAUGGAЖCUAUUAUUAUUAGAAACCUUUCAGUGGAACCUCUGCCUUCCAACAGCCGCCCAUUUCAUUGAGUAUUAUCUCUCUGAAGCAGUACACGAAACAGAUCUUCAUGACGGCUGGCCAAUGAUUUGCUUGGAAAAGACUAAACUCUACAUGGCCAAAUAUGCAGAUUACUUCCUGGAAGUAUCUUUGCAAGCUGCUGCAUGUGUGGCUUCUUCGAGGAUUAUACUUCGUCUUUCUCCAACGUGGCCUACAAGACUACAUCGUCUUACUGCCUACUCUUGGGAUUUCUUAGUGCAGUGUAUUGAACGACUGUUGAUCGCUCAUGAUAAUGAUGUGAAAGAAGCAAACAAACAGAGAGGGCAAGCAGGACCUCAGUCAGCGCAACUAAGUGUAUUCCAGACAGCCUCCCAGCCAUCACGGCCAGUUCACUUUCAGCAACCUCAGUAUCUCCAUCAGACACAUCAGACCUCACUGCAGUAUCGCCAUCCUACGUCAGAACAACCAAGCUGUCAGCAGAUUGUAUCGACCACACACACCUCAUCUUACACACUACAGЖCAUGUCCUGCUGGCUUCCAAACUAGUGUUCAGGGCCUUGGGCACAUGCAGЖCUGGUGUUGGGAUGUCACUGGCAAUACCAGUAGAAGUUAAGCCCUGUCUGAGUGUUUCUUACAACCGGAGUUAUCAGAUAAAUGAЖCAUUACCCUUGUAUUACUCCAUGUUUUGAAAGGUGAUUAUUUGUGAAGCUGAUAACCGACCCAGЖCUGCUUUGUGACAUGAAGCUAUGGGUAAGCGUUUUGUAAACUUCUGUUCAAAAGGAAAGGGAUCUAAAUGACAUCAGAЖCUCUUCAGGUACCAGCACCAGGAAGЖCUGAAUAUCCUUUUUAAUGCACCAUGAAUCCUGGGAGACUAAGCAAAUUAACAGUAUGUCAAAUUCUGUUACAACAAAUCCCUGUAUGACAAAAAUGUUCAAGUCCUGGCUGAUGGUCCAAAUAUUUCAAAAAUAUUCAGUACAACAGAAAAUUUGGЖCAGЖCUUCAAUUUGCCAUUUUGAGAUUUGACCUGUGGUAGCAUCUGGGCCUAAUGUUGGCUUCUAAGUCAAAGЖCUAAAUGUUUAUCUCAUCUAUGGЖCUUGCCAAACAGUCUUUUAUGAAGGAAAGUUACAGUAUUAAUUUUUGAAAAGGUUUUUUUUAUUCUGCAAUUUUUUAUUUUUGUUCUACACAUGAAUUUUUGACUAAGUUUAAACUCAUGAAUUGUUAUGCUAUACCAAUCUGCAGUAAAAAAAAUUUUUUUAGAUGAUUCUAUAUAACUUCGUCUCACAAAUAGUGUAGGUAUCUGGGUUUAUAUACUAAAAUUAAGGGUGGAGAAGAUCUUAUUUUUUAAAUCAUGGUCAUAAUUUUUCUUUUUUUCCCUAAGUGAUCAACAUCAAAUUUUUAGAAUUAAAAUACAUUUAACUCAGGGAAUUUGUACUACUUGGAAACACUUAACUGUAAUGCAACAUGCCUUGGGAAUGUUAUAGUGUGAACUACCUUUAUAACAUAGGUUAAAAUACGCUUGCUAGGGUGUGUUUUCAAAUGAGAACAUAAUAUAGCUCAGAAUGAAGUGGUAGUUCCUGUGAUUCAUAAUACAUAUGUAGGUUUUGCAUAUCUCAGUGCAAUCCAUGAUUUAUACUCAGAAUCGACAUUCUUAAAAAGUUAUUUCAAGGGAUGGCAUAACUGUAAGAGGUCAGUGCUAGAAUAAAGUCCUGUAGGUUUAUUUUGGAAGGGACUGUGGCCAGGGUAGUUCUCAGGUUGUGCUAGAGCAGCACUUUGUUAUGUGGAAGACAGGUUUUUUAAGCAACCUUUGAAUCCAGCUCUAGUCAGUCUAAGCAGGCAAAGGUAACUGAUGACUAAAUUUCAGUAGCUACUUUCAUUGGAUUGACCCUACAACUGCCCUGGGACAUUUCACUGUACCAGUAUUAACUGCAAACAGCAAUAAUUGUCAUUACAGCAAGGGCAGUUUGGGGGUAAAGCAUUUUGGAGGAAUAACCUUAAAAAGUUAAAAAGUCAUUGUAAUAACUGAUAAACUGUAUACAUUGUGCUCCUUUCU
Sequence (SHORT NAMES ENCODING)	CGUGCGGGAUGCUGACCGUACCCAGGCGGGAGCCGCCGCGCCGCCGCCUGGCGCUGCACCUGGGCCCGGCCCGGCCGCCAAUUGGACGGCUCGGGGCGACCCCGCUGUAUCGCGAGACGAGAUUGGCAGCGGCGGGGCCUCAAGUGCCCCCGCGCUGGCUUUGUAUGCGGAGCCGCCUGCCGGUCCUUUAACAAUGGGCGGCGCGAGCGUCCAGGCGCUGGGCUCUAGCUGAGGCCGGCGCUUAGCGGCCCACUGUCCGCAGCAUGAGCGGGGCCGGCGUCCGCCGCACGACGGCGGGGCUGGGGCUGUGAGGGCCGCGGUUCCGGACUCGAGUUGCCGCGUCGGGCUGGGCGCGCCGCCGGGUCCCAUGGAGCUGGAGGGGCAGUGGUGGCGAGGACAGCUGGCCGCCGAUAUUCACCAAGCGCUUCGCUACAAGGAGCUGAAGUUGCCCUCCUAUAAAGGCCAGUCCCCUCAGUUAAGUCUCAGACGGUAUUUUGCUGACUUGAUUGCCAUUGUGAGCAAUCGCUUCACACUCUGCCCUUCUGCCCGCCAUCUUGCUGUCUAUUUACUGGACCUGUUUAUGGACCGCUAUGACAUCUCUAUCCAGCAGCUGCAUUUAGUUGCGCUUUCCUGCCUGCUUCUAGCAAGUAAAUUUGAAGAAAAAGAAGACAGUGUGCCUAAGCUGGAGCAGCUCAACAGCCUGGGUUGUAUGACUAAUAUGAAUCUAGUAUUAACAAAACAAAAUUUGCUACAUAUGGAm6ACUAUUAUUAUUAGAAACCUUUCAGUGGAACCUCUGCCUUCCAACAGCCGCCCAUUUCAUUGAGUAUUAUCUCUCUGAAGCAGUACACGAAACAGAUCUUCAUGACGGCUGGCCAAUGAUUUGCUUGGAAAAGACUAAACUCUACAUGGCCAAAUAUGCAGAUUACUUCCUGGAAGUAUCUUUGCAAGCUGCUGCAUGUGUGGCUUCUUCGAGGAUUAUACUUCGUCUUUCUCCAACGUGGCCUACAAGACUACAUCGUCUUACUGCCUACUCUUGGGAUUUCUUAGUGCAGUGUAUUGAACGACUGUUGAUCGCUCAUGAUAAUGAUGUGAAAGAAGCAAACAAACAGAGAGGGCAAGCAGGACCUCAGUCAGCGCAACUAAGUGUAUUCCAGACAGCCUCCCAGCCAUCACGGCCAGUUCACUUUCAGCAACCUCAGUAUCUCCAUCAGACACAUCAGACCUCACUGCAGUAUCGCCAUCCUACGUCAGAACAACCAAGCUGUCAGCAGAUUGUAUCGACCACACACACCUCAUCUUACACACUACAGm6ACAUGUCCUGCUGGCUUCCAAACUAGUGUUCAGGGCCUUGGGCACAUGCAGm6ACUGGUGUUGGGAUGUCACUGGCAAUACCAGUAGAAGUUAAGCCCUGUCUGAGUGUUUCUUACAACCGGAGUUAUCAGAUAAAUGAm6ACAUUACCCUUGUAUUACUCCAUGUUUUGAAAGGUGAUUAUUUGUGAAGCUGAUAACCGACCCAGm6ACUGCUUUGUGACAUGAAGCUAUGGGUAAGCGUUUUGUAAACUUCUGUUCAAAAGGAAAGGGAUCUAAAUGACAUCAGAm6ACUCUUCAGGUACCAGCACCAGGAAGm6ACUGAAUAUCCUUUUUAAUGCACCAUGAAUCCUGGGAGACUAAGCAAAUUAACAGUAUGUCAAAUUCUGUUACAACAAAUCCCUGUAUGACAAAAAUGUUCAAGUCCUGGCUGAUGGUCCAAAUAUUUCAAAAAUAUUCAGUACAACAGAAAAUUUGGm6ACAGm6ACUUCAAUUUGCCAUUUUGAGAUUUGACCUGUGGUAGCAUCUGGGCCUAAUGUUGGCUUCUAAGUCAAAGm6ACUAAAUGUUUAUCUCAUCUAUGGm6ACUUGCCAAACAGUCUUUUAUGAAGGAAAGUUACAGUAUUAAUUUUUGAAAAGGUUUUUUUUAUUCUGCAAUUUUUUAUUUUUGUUCUACACAUGAAUUUUUGACUAAGUUUAAACUCAUGAAUUGUUAUGCUAUACCAAUCUGCAGUAAAAAAAAUUUUUUUAGAUGAUUCUAUAUAACUUCGUCUCACAAAUAGUGUAGGUAUCUGGGUUUAUAUACUAAAAUUAAGGGUGGAGAAGAUCUUAUUUUUUAAAUCAUGGUCAUAAUUUUUCUUUUUUUCCCUAAGUGAUCAACAUCAAAUUUUUAGAAUUAAAAUACAUUUAACUCAGGGAAUUUGUACUACUUGGAAACACUUAACUGUAAUGCAACAUGCCUUGGGAAUGUUAUAGUGUGAACUACCUUUAUAACAUAGGUUAAAAUACGCUUGCUAGGGUGUGUUUUCAAAUGAGAACAUAAUAUAGCUCAGAAUGAAGUGGUAGUUCCUGUGAUUCAUAAUACAUAUGUAGGUUUUGCAUAUCUCAGUGCAAUCCAUGAUUUAUACUCAGAAUCGACAUUCUUAAAAAGUUAUUUCAAGGGAUGGCAUAACUGUAAGAGGUCAGUGCUAGAAUAAAGUCCUGUAGGUUUAUUUUGGAAGGGACUGUGGCCAGGGUAGUUCUCAGGUUGUGCUAGAGCAGCACUUUGUUAUGUGGAAGACAGGUUUUUUAAGCAACCUUUGAAUCCAGCUCUAGUCAGUCUAAGCAGGCAAAGGUAACUGAUGACUAAAUUUCAGUAGCUACUUUCAUUGGAUUGACCCUACAACUGCCCUGGGACAUUUCACUGUACCAGUAUUAACUGCAAACAGCAAUAAUUGUCAUUACAGCAAGGGCAGUUUGGGGGUAAAGCAUUUUGGAGGAAUAACCUUAAAAAGUUAAAAAGUCAUUGUAAUAACUGAUAAACUGUAUACAUUGUGCUCCUUUCU
Sequence (MODOMICS CODE ENCODING)	CGUGCGGGAUGCUGACCGUACCCAGGCGGGAGCCGCCGCGCCGCCGCCUGGCGCUGCACCUGGGCCCGGCCCGGCCGCCAAUUGGACGGCUCGGGGCGACCCCGCUGUAUCGCGAGACGAGAUUGGCAGCGGCGGGGCCUCAAGUGCCCCCGCGCUGGCUUUGUAUGCGGAGCCGCCUGCCGGUCCUUUAACAAUGGGCGGCGCGAGCGUCCAGGCGCUGGGCUCUAGCUGAGGCCGGCGCUUAGCGGCCCACUGUCCGCAGCAUGAGCGGGGCCGGCGUCCGCCGCACGACGGCGGGGCUGGGGCUGUGAGGGCCGCGGUUCCGGACUCGAGUUGCCGCGUCGGGCUGGGCGCGCCGCCGGGUCCCAUGGAGCUGGAGGGGCAGUGGUGGCGAGGACAGCUGGCCGCCGAUAUUCACCAAGCGCUUCGCUACAAGGAGCUGAAGUUGCCCUCCUAUAAAGGCCAGUCCCCUCAGUUAAGUCUCAGACGGUAUUUUGCUGACUUGAUUGCCAUUGUGAGCAAUCGCUUCACACUCUGCCCUUCUGCCCGCCAUCUUGCUGUCUAUUUACUGGACCUGUUUAUGGACCGCUAUGACAUCUCUAUCCAGCAGCUGCAUUUAGUUGCGCUUUCCUGCCUGCUUCUAGCAAGUAAAUUUGAAGAAAAAGAAGACAGUGUGCCUAAGCUGGAGCAGCUCAACAGCCUGGGUUGUAUGACUAAUAUGAAUCUAGUAUUAACAAAACAAAAUUUGCUACAUAUGGA2000000006ACUAUUAUUAUUAGAAACCUUUCAGUGGAACCUCUGCCUUCCAACAGCCGCCCAUUUCAUUGAGUAUUAUCUCUCUGAAGCAGUACACGAAACAGAUCUUCAUGACGGCUGGCCAAUGAUUUGCUUGGAAAAGACUAAACUCUACAUGGCCAAAUAUGCAGAUUACUUCCUGGAAGUAUCUUUGCAAGCUGCUGCAUGUGUGGCUUCUUCGAGGAUUAUACUUCGUCUUUCUCCAACGUGGCCUACAAGACUACAUCGUCUUACUGCCUACUCUUGGGAUUUCUUAGUGCAGUGUAUUGAACGACUGUUGAUCGCUCAUGAUAAUGAUGUGAAAGAAGCAAACAAACAGAGAGGGCAAGCAGGACCUCAGUCAGCGCAACUAAGUGUAUUCCAGACAGCCUCCCAGCCAUCACGGCCAGUUCACUUUCAGCAACCUCAGUAUCUCCAUCAGACACAUCAGACCUCACUGCAGUAUCGCCAUCCUACGUCAGAACAACCAAGCUGUCAGCAGAUUGUAUCGACCACACACACCUCAUCUUACACACUACAG2000000006ACAUGUCCUGCUGGCUUCCAAACUAGUGUUCAGGGCCUUGGGCACAUGCAG2000000006ACUGGUGUUGGGAUGUCACUGGCAAUACCAGUAGAAGUUAAGCCCUGUCUGAGUGUUUCUUACAACCGGAGUUAUCAGAUAAAUGA2000000006ACAUUACCCUUGUAUUACUCCAUGUUUUGAAAGGUGAUUAUUUGUGAAGCUGAUAACCGACCCAG2000000006ACUGCUUUGUGACAUGAAGCUAUGGGUAAGCGUUUUGUAAACUUCUGUUCAAAAGGAAAGGGAUCUAAAUGACAUCAGA2000000006ACUCUUCAGGUACCAGCACCAGGAAG2000000006ACUGAAUAUCCUUUUUAAUGCACCAUGAAUCCUGGGAGACUAAGCAAAUUAACAGUAUGUCAAAUUCUGUUACAACAAAUCCCUGUAUGACAAAAAUGUUCAAGUCCUGGCUGAUGGUCCAAAUAUUUCAAAAAUAUUCAGUACAACAGAAAAUUUGG2000000006ACAG2000000006ACUUCAAUUUGCCAUUUUGAGAUUUGACCUGUGGUAGCAUCUGGGCCUAAUGUUGGCUUCUAAGUCAAAG2000000006ACUAAAUGUUUAUCUCAUCUAUGG2000000006ACUUGCCAAACAGUCUUUUAUGAAGGAAAGUUACAGUAUUAAUUUUUGAAAAGGUUUUUUUUAUUCUGCAAUUUUUUAUUUUUGUUCUACACAUGAAUUUUUGACUAAGUUUAAACUCAUGAAUUGUUAUGCUAUACCAAUCUGCAGUAAAAAAAAUUUUUUUAGAUGAUUCUAUAUAACUUCGUCUCACAAAUAGUGUAGGUAUCUGGGUUUAUAUACUAAAAUUAAGGGUGGAGAAGAUCUUAUUUUUUAAAUCAUGGUCAUAAUUUUUCUUUUUUUCCCUAAGUGAUCAACAUCAAAUUUUUAGAAUUAAAAUACAUUUAACUCAGGGAAUUUGUACUACUUGGAAACACUUAACUGUAAUGCAACAUGCCUUGGGAAUGUUAUAGUGUGAACUACCUUUAUAACAUAGGUUAAAAUACGCUUGCUAGGGUGUGUUUUCAAAUGAGAACAUAAUAUAGCUCAGAAUGAAGUGGUAGUUCCUGUGAUUCAUAAUACAUAUGUAGGUUUUGCAUAUCUCAGUGCAAUCCAUGAUUUAUACUCAGAAUCGACAUUCUUAAAAAGUUAUUUCAAGGGAUGGCAUAACUGUAAGAGGUCAGUGCUAGAAUAAAGUCCUGUAGGUUUAUUUUGGAAGGGACUGUGGCCAGGGUAGUUCUCAGGUUGUGCUAGAGCAGCACUUUGUUAUGUGGAAGACAGGUUUUUUAAGCAACCUUUGAAUCCAGCUCUAGUCAGUCUAAGCAGGCAAAGGUAACUGAUGACUAAAUUUCAGUAGCUACUUUCAUUGGAUUGACCCUACAACUGCCCUGGGACAUUUCACUGUACCAGUAUUAACUGCAAACAGCAAUAAUUGUCAUUACAGCAAGGGCAGUUUGGGGGUAAAGCAUUUUGGAGGAAUAACCUUAAAAAGUUAAAAAGUCAUUGUAAUAACUGAUAAACUGUAUACAUUGUGCUCCUUUCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	760	1310	1361	1447	1512	1591	1617	1775	1779	1849	1873
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	10:96056813:+	10:96058068:+	10:96058119:+	10:96058205:+	10:96058270:+	10:96058349:+	10:96058375:+	10:96058533:+	10:96058537:+	10:96058607:+	10:96058631:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB Lny8GcCeVGc9	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9	3TeAZFYFxgvp gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	4HMi5ykupT9V 5aTkEfEpX8Xm Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL	Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G	msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se Lny8GcCeVGc9