General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000370002
Gene ID:	ENSG00000107859
Gene Name:	PITX3
Sequence (UNICHARACTER ENCODING)	GGCAGUACGCGGUGAGGCUCACUCCCUCCGAGAGUCCAGGAGCGCCCGAGCGGAGAGGCGGCCCGGGAGCAGGGGGGCGGCCCCCACUCCGGCCGGGUGCCCGGCCCCUGGCCCCUGCCUGCCCUCUAGAUCGCCGCCGCAGCCGCCGCUACUGGGAGUCUGCCUGUUGCAGGACGCACUAGCCCUCCCUCCAUGGAGUUCGGCCUGCUCAGCGAGGCAGAGGCCCGGAGCCCUGCCCUGUCGCUGUCAGACGCUGGCACUCCGCACCCCCAGCUCCCAGAGCACGGCUGCAAGGGCCAGGAGCACAGCGACUCAGAAAAGGCCUCGGCUUCGCUGCCCGGCGGCUCCCCAGAGGACGGUUCGCUGAAAAAGAAGCAGCGGCGGCAGCGCACGCACUUCACCAGCCAGCAGCUACAGGAGCUAGAGGCGACCUUCCAGAGGAACCGCUACCCCGACAUGAGCACGCGCGAGGAGAUCGCCGUGUGGACCAACCUCACCGAGGCCCGCGUGCGGGUGUGGUUCAAGAACCGGCGCGCCAAAUGGCGGAAGCGCGAGCGCAGCCAGCAGGCCGAGCUAUGCAAAGGCAGCUUCGCGGCGCCGCUCGGGGGGCUGGUGCCGCCCUACGAGGAGGUGUACCCCGGCUACUCGUACGGCAACUGGCCGCCCAAGGCUCUUGCCCCGCCGCUCGCCGCCAAGACCUUUCCAUUCGCCUUCAACUCGGUCAACGUGGGGCCUCUGGCUUCGCAGCCCGUCUUCUCGCCACCCAGCUCCAUCGCCGCCUCCAUGGUGCCCUCCGCCGCGGCUGCCCCGGGCACCGUGCCAGGGCCUGGGGCCCUGCAGGGCCUGGGCGGGGGCCCCCCCGGGCUGGCUCCGGCCGCCGUGUCCUCCGGGGCCGUGUCCUGCCCUUAUGCCUCGGCCGCCGCCGCCGCCGCGGCUGCCGCCUCUUCCCCCUACGUCUAUCGGGЖCCCGUGUAACUCGAGCCUGGCCAGCCUGCGGCUCAAAGCCAAACAGCACGCCUCCUUCAGCUACCCCGCUGUGCACGGGCCGCCCCCGGCAGCCAACCUUAGUCCGUGCCAGUACGCCGUGGAAAGGCCCGUAUGAGCGGCCCCGCCCGUAGAUCAUCCCCGAGGGCGGGGGCAACGAUUCACAGCCUCCGCGGЖCUGGGGUCAUUUUGЖCUGGCUUGCUCCCGCCCCAGGGUCUGAAAGGGGUGUUUGGGCAGCUGGGGGGCACCGGCUCAGGAGAGGGCCUUCCCCUCCCAGCCCUGAGGGGUGGЖCUAGGCCCUACACACAGACCGCGCCCCUGGGЖCUAAAGCCAGGAACAGGGACCAGCUCCCCGGGGGCCAACUCACCCUUGGCCCAUCCCGCCUUCUCCAGGCUUCCCCUCCCUCGUUUUCAAAGAUAAAUGAAAUAAACGUGCGCGGACUGUC
Sequence (SHORT NAMES ENCODING)	GGCAGUACGCGGUGAGGCUCACUCCCUCCGAGAGUCCAGGAGCGCCCGAGCGGAGAGGCGGCCCGGGAGCAGGGGGGCGGCCCCCACUCCGGCCGGGUGCCCGGCCCCUGGCCCCUGCCUGCCCUCUAGAUCGCCGCCGCAGCCGCCGCUACUGGGAGUCUGCCUGUUGCAGGACGCACUAGCCCUCCCUCCAUGGAGUUCGGCCUGCUCAGCGAGGCAGAGGCCCGGAGCCCUGCCCUGUCGCUGUCAGACGCUGGCACUCCGCACCCCCAGCUCCCAGAGCACGGCUGCAAGGGCCAGGAGCACAGCGACUCAGAAAAGGCCUCGGCUUCGCUGCCCGGCGGCUCCCCAGAGGACGGUUCGCUGAAAAAGAAGCAGCGGCGGCAGCGCACGCACUUCACCAGCCAGCAGCUACAGGAGCUAGAGGCGACCUUCCAGAGGAACCGCUACCCCGACAUGAGCACGCGCGAGGAGAUCGCCGUGUGGACCAACCUCACCGAGGCCCGCGUGCGGGUGUGGUUCAAGAACCGGCGCGCCAAAUGGCGGAAGCGCGAGCGCAGCCAGCAGGCCGAGCUAUGCAAAGGCAGCUUCGCGGCGCCGCUCGGGGGGCUGGUGCCGCCCUACGAGGAGGUGUACCCCGGCUACUCGUACGGCAACUGGCCGCCCAAGGCUCUUGCCCCGCCGCUCGCCGCCAAGACCUUUCCAUUCGCCUUCAACUCGGUCAACGUGGGGCCUCUGGCUUCGCAGCCCGUCUUCUCGCCACCCAGCUCCAUCGCCGCCUCCAUGGUGCCCUCCGCCGCGGCUGCCCCGGGCACCGUGCCAGGGCCUGGGGCCCUGCAGGGCCUGGGCGGGGGCCCCCCCGGGCUGGCUCCGGCCGCCGUGUCCUCCGGGGCCGUGUCCUGCCCUUAUGCCUCGGCCGCCGCCGCCGCCGCGGCUGCCGCCUCUUCCCCCUACGUCUAUCGGGm6ACCCGUGUAACUCGAGCCUGGCCAGCCUGCGGCUCAAAGCCAAACAGCACGCCUCCUUCAGCUACCCCGCUGUGCACGGGCCGCCCCCGGCAGCCAACCUUAGUCCGUGCCAGUACGCCGUGGAAAGGCCCGUAUGAGCGGCCCCGCCCGUAGAUCAUCCCCGAGGGCGGGGGCAACGAUUCACAGCCUCCGCGGm6ACUGGGGUCAUUUUGm6ACUGGCUUGCUCCCGCCCCAGGGUCUGAAAGGGGUGUUUGGGCAGCUGGGGGGCACCGGCUCAGGAGAGGGCCUUCCCCUCCCAGCCCUGAGGGGUGGm6ACUAGGCCCUACACACAGACCGCGCCCCUGGGm6ACUAAAGCCAGGAACAGGGACCAGCUCCCCGGGGGCCAACUCACCCUUGGCCCAUCCCGCCUUCUCCAGGCUUCCCCUCCCUCGUUUUCAAAGAUAAAUGAAAUAAACGUGCGCGGACUGUC
Sequence (MODOMICS CODE ENCODING)	GGCAGUACGCGGUGAGGCUCACUCCCUCCGAGAGUCCAGGAGCGCCCGAGCGGAGAGGCGGCCCGGGAGCAGGGGGGCGGCCCCCACUCCGGCCGGGUGCCCGGCCCCUGGCCCCUGCCUGCCCUCUAGAUCGCCGCCGCAGCCGCCGCUACUGGGAGUCUGCCUGUUGCAGGACGCACUAGCCCUCCCUCCAUGGAGUUCGGCCUGCUCAGCGAGGCAGAGGCCCGGAGCCCUGCCCUGUCGCUGUCAGACGCUGGCACUCCGCACCCCCAGCUCCCAGAGCACGGCUGCAAGGGCCAGGAGCACAGCGACUCAGAAAAGGCCUCGGCUUCGCUGCCCGGCGGCUCCCCAGAGGACGGUUCGCUGAAAAAGAAGCAGCGGCGGCAGCGCACGCACUUCACCAGCCAGCAGCUACAGGAGCUAGAGGCGACCUUCCAGAGGAACCGCUACCCCGACAUGAGCACGCGCGAGGAGAUCGCCGUGUGGACCAACCUCACCGAGGCCCGCGUGCGGGUGUGGUUCAAGAACCGGCGCGCCAAAUGGCGGAAGCGCGAGCGCAGCCAGCAGGCCGAGCUAUGCAAAGGCAGCUUCGCGGCGCCGCUCGGGGGGCUGGUGCCGCCCUACGAGGAGGUGUACCCCGGCUACUCGUACGGCAACUGGCCGCCCAAGGCUCUUGCCCCGCCGCUCGCCGCCAAGACCUUUCCAUUCGCCUUCAACUCGGUCAACGUGGGGCCUCUGGCUUCGCAGCCCGUCUUCUCGCCACCCAGCUCCAUCGCCGCCUCCAUGGUGCCCUCCGCCGCGGCUGCCCCGGGCACCGUGCCAGGGCCUGGGGCCCUGCAGGGCCUGGGCGGGGGCCCCCCCGGGCUGGCUCCGGCCGCCGUGUCCUCCGGGGCCGUGUCCUGCCCUUAUGCCUCGGCCGCCGCCGCCGCCGCGGCUGCCGCCUCUUCCCCCUACGUCUAUCGGG2000000006ACCCGUGUAACUCGAGCCUGGCCAGCCUGCGGCUCAAAGCCAAACAGCACGCCUCCUUCAGCUACCCCGCUGUGCACGGGCCGCCCCCGGCAGCCAACCUUAGUCCGUGCCAGUACGCCGUGGAAAGGCCCGUAUGAGCGGCCCCGCCCGUAGAUCAUCCCCGAGGGCGGGGGCAACGAUUCACAGCCUCCGCGG2000000006ACUGGGGUCAUUUUG2000000006ACUGGCUUGCUCCCGCCCCAGGGUCUGAAAGGGGUGUUUGGGCAGCUGGGGGGCACCGGCUCAGGAGAGGGCCUUCCCCUCCCAGCCCUGAGGGGUGG2000000006ACUAGGCCCUACACACAGACCGCGCCCCUGGG2000000006ACUAAAGCCAGGAACAGGGACCAGCUCCCCGGGGGCCAACUCACCCUUGGCCCAUCCCGCCUUCUCCAGGCUUCCCCUCCCUCGUUUUCAAAGAUAAAUGAAAUAAACGUGCGCGGACUGUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	965	1160	1175	1273	1305
Modification Positions	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	10:102230650:-	10:102230455:-	10:102230440:-	10:102230342:-	10:102230310:-
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	Ap2q43bQLNek msuJfBpJvM5H VyCX26p5UBRL