General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000426961
Gene ID:	ENSG00000196793
Gene Name:	ZNF239
Sequence (UNICHARACTER ENCODING)	UUGUAUUUCGGGGCCCUAGGCGCGCGAGCGGUCAGCAUCCGGAAUCUGGCCCCUGCAGGCGUGGGGUUCCACGUGGGAGGAACCAGUUACAUUCAAGGAUGCCUCUGUGGCCUUCACCGAGGAGGAGUGAGGUCACCUGGACUCUGCUCCCAGGAAGCUGUGCGGAGCUGUGAUGCUGGGCAACUACAGAAACUUGGUCUUGGAGACUUGAAUGAAAAUUCUGUGGAGAAUCUUCAGCAGAAAACACUUCAGGAUCUGUUACAUGAGCUUUCCUCCUGGCUAGUUUUGGAAGGCAUGGCCAGUACAAUUACUGGAAGUCAGGAUUGUAUUGUGAAUCAUCGAGGGGAAGUGGAUGGGGAGCCUGAЖCUAGAUAUUUCCCCUUGUCAACAGUGGGGAGAAGCAUCUUCUCCUAUUUCCAGAAACAGGGЖCAGUGUGAUGACUCUUCAAAGUGGUUGUUUCGAAAACAUUGAAAGUGAAACAUAUUUGCCUUUGAAAGUCUCAAGCCAAAUAGACACACAAGACUCUUCAGUGAAGUUCUGUAAGAAUGAGCCUCAGGAUCAUCAGGAAAGCAGACGUCUCUUUGUAAUGGAAGAAAGCACUGAGAGAAAAGUGAUAAAGGGGGAAAGUUGUUCAGAGAACCUUCAAGUUAAACUGGUGUCUGAUGGЖCAAGAЖCUGGCCUCGCCAUUGUUAAAUGGUGAGGCAACUUGCCAGAAUGGCCAGUUAAAAGAAUCUUUGGAUCCCAUUGЖCUGUAACUGCAAAGACAUUCAUGGAUGGAAAUCACAGGUGGUCAGUUGUAGUCAGCAGAGAGCUCAUACAGAGGAGAAACCCUGUGACCAUAAUAЖCUGUGGGAAAAUACUUAACACCAGCCCAGAUGGUCAUCCAUAUGAGAAAAUCCACACUGCAGAGAAACAAUACGAAUGUAGUCAGUGUGGUAAGAЖCUUCAGUCAAAGCUCAGAGCUACUACUUCAUCAGAGAGACCACACAGAAGAAAAACCCUACAAAUGUGAGCAAUGUGGGAAGGGCUUCACAAGGAGCUCGAGUCUGCUUAUCCAUCAGGCAGUCCACACAGAUGAGAAGCCUUAUAAGUGUGACAAGUGUGGGAAGGGCUUCACCAGGAGCUCAAGUCUGCUCAUCCAUCAUGCCGUCCAUACAGGCGAAAAACCUUAUAAAUGUGACAAGUGUGGGAAGGGCUUUAGUCAGAGCUCCAAACUGCACAUCCACCAGCGAGUCCACACUGGAGAGAAGCCCUAUGAGUGUGAGGAGUGUGGUAUGAGCUUCAGUCAGCGCUCAAACCUGCACAUCCACCAGCGAGUACACACAGGAGAGAGGCCCUACAAGUGUGGUGAGUGUGGGAAGGGCUUCAGUCAGAGCUCGAACCUUCACAUUCACCGGUGCAUCCACACAGGAGAGAAGCCUUACCAAUGCUAUGAGUGUGGGAAGGGUUUCAGCCAGAGCUCGGAUCUUCGCAUCCAUCUCAGAGUCCACACUGGAGAGAAGCCCUAUCACUGUGGCAAGUGUGGGAAGGGAUUUAGCCAGAGUUCCAAACUCCUCAUCCACCAGAGAGUACAUACUGGAGAGAAGCCCUAUGAGUGCAGCAAGUGUGGGAAGGGCUUCAGCCAGAGCUCCAACCUUCACAUCCACCAGCGGGUUCACAAGAAAGAUCCUCGCUAACUGACAUUAGCCCAUUCAGGUCUUCACAGCGCUCAUACUGUAAAAACUGUUAAAUAUUUAGUAUCACUCUUACUUUAUAUUCUACAAAGGAGAGAGAUGUAAGGGUUAUUUAGAUAUGUUCCCUCACUGAAAAAUCACUCAUUCAAAAUAUUUAAGUAUCAAGCACUUUGUUAUGCUGUACAAUGAAUGGAUUGUUCUUGUUUCUCAGAUGGGUAGAGUAAAAGUGUCUGUACUUUACAAUUCAACUACAUGUUCUACCCAGCAUUUUAACGGCAAGAЖCUUUAUAUUUAUUCUCAAGCAGGGCAUGUUUCCCUUUGUUCACAUUCUCUGAGAAAUUGAAACUCUGGUUUCUCUUC
Sequence (SHORT NAMES ENCODING)	UUGUAUUUCGGGGCCCUAGGCGCGCGAGCGGUCAGCAUCCGGAAUCUGGCCCCUGCAGGCGUGGGGUUCCACGUGGGAGGAACCAGUUACAUUCAAGGAUGCCUCUGUGGCCUUCACCGAGGAGGAGUGAGGUCACCUGGACUCUGCUCCCAGGAAGCUGUGCGGAGCUGUGAUGCUGGGCAACUACAGAAACUUGGUCUUGGAGACUUGAAUGAAAAUUCUGUGGAGAAUCUUCAGCAGAAAACACUUCAGGAUCUGUUACAUGAGCUUUCCUCCUGGCUAGUUUUGGAAGGCAUGGCCAGUACAAUUACUGGAAGUCAGGAUUGUAUUGUGAAUCAUCGAGGGGAAGUGGAUGGGGAGCCUGAm6ACUAGAUAUUUCCCCUUGUCAACAGUGGGGAGAAGCAUCUUCUCCUAUUUCCAGAAACAGGGm6ACAGUGUGAUGACUCUUCAAAGUGGUUGUUUCGAAAACAUUGAAAGUGAAACAUAUUUGCCUUUGAAAGUCUCAAGCCAAAUAGACACACAAGACUCUUCAGUGAAGUUCUGUAAGAAUGAGCCUCAGGAUCAUCAGGAAAGCAGACGUCUCUUUGUAAUGGAAGAAAGCACUGAGAGAAAAGUGAUAAAGGGGGAAAGUUGUUCAGAGAACCUUCAAGUUAAACUGGUGUCUGAUGGm6ACAAGAm6ACUGGCCUCGCCAUUGUUAAAUGGUGAGGCAACUUGCCAGAAUGGCCAGUUAAAAGAAUCUUUGGAUCCCAUUGm6ACUGUAACUGCAAAGACAUUCAUGGAUGGAAAUCACAGGUGGUCAGUUGUAGUCAGCAGAGAGCUCAUACAGAGGAGAAACCCUGUGACCAUAAUAm6ACUGUGGGAAAAUACUUAACACCAGCCCAGAUGGUCAUCCAUAUGAGAAAAUCCACACUGCAGAGAAACAAUACGAAUGUAGUCAGUGUGGUAAGAm6ACUUCAGUCAAAGCUCAGAGCUACUACUUCAUCAGAGAGACCACACAGAAGAAAAACCCUACAAAUGUGAGCAAUGUGGGAAGGGCUUCACAAGGAGCUCGAGUCUGCUUAUCCAUCAGGCAGUCCACACAGAUGAGAAGCCUUAUAAGUGUGACAAGUGUGGGAAGGGCUUCACCAGGAGCUCAAGUCUGCUCAUCCAUCAUGCCGUCCAUACAGGCGAAAAACCUUAUAAAUGUGACAAGUGUGGGAAGGGCUUUAGUCAGAGCUCCAAACUGCACAUCCACCAGCGAGUCCACACUGGAGAGAAGCCCUAUGAGUGUGAGGAGUGUGGUAUGAGCUUCAGUCAGCGCUCAAACCUGCACAUCCACCAGCGAGUACACACAGGAGAGAGGCCCUACAAGUGUGGUGAGUGUGGGAAGGGCUUCAGUCAGAGCUCGAACCUUCACAUUCACCGGUGCAUCCACACAGGAGAGAAGCCUUACCAAUGCUAUGAGUGUGGGAAGGGUUUCAGCCAGAGCUCGGAUCUUCGCAUCCAUCUCAGAGUCCACACUGGAGAGAAGCCCUAUCACUGUGGCAAGUGUGGGAAGGGAUUUAGCCAGAGUUCCAAACUCCUCAUCCACCAGAGAGUACAUACUGGAGAGAAGCCCUAUGAGUGCAGCAAGUGUGGGAAGGGCUUCAGCCAGAGCUCCAACCUUCACAUCCACCAGCGGGUUCACAAGAAAGAUCCUCGCUAACUGACAUUAGCCCAUUCAGGUCUUCACAGCGCUCAUACUGUAAAAACUGUUAAAUAUUUAGUAUCACUCUUACUUUAUAUUCUACAAAGGAGAGAGAUGUAAGGGUUAUUUAGAUAUGUUCCCUCACUGAAAAAUCACUCAUUCAAAAUAUUUAAGUAUCAAGCACUUUGUUAUGCUGUACAAUGAAUGGAUUGUUCUUGUUUCUCAGAUGGGUAGAGUAAAAGUGUCUGUACUUUACAAUUCAACUACAUGUUCUACCCAGCAUUUUAACGGCAAGAm6ACUUUAUAUUUAUUCUCAAGCAGGGCAUGUUUCCCUUUGUUCACAUUCUCUGAGAAAUUGAAACUCUGGUUUCUCUUC
Sequence (MODOMICS CODE ENCODING)	UUGUAUUUCGGGGCCCUAGGCGCGCGAGCGGUCAGCAUCCGGAAUCUGGCCCCUGCAGGCGUGGGGUUCCACGUGGGAGGAACCAGUUACAUUCAAGGAUGCCUCUGUGGCCUUCACCGAGGAGGAGUGAGGUCACCUGGACUCUGCUCCCAGGAAGCUGUGCGGAGCUGUGAUGCUGGGCAACUACAGAAACUUGGUCUUGGAGACUUGAAUGAAAAUUCUGUGGAGAAUCUUCAGCAGAAAACACUUCAGGAUCUGUUACAUGAGCUUUCCUCCUGGCUAGUUUUGGAAGGCAUGGCCAGUACAAUUACUGGAAGUCAGGAUUGUAUUGUGAAUCAUCGAGGGGAAGUGGAUGGGGAGCCUGA2000000006ACUAGAUAUUUCCCCUUGUCAACAGUGGGGAGAAGCAUCUUCUCCUAUUUCCAGAAACAGGG2000000006ACAGUGUGAUGACUCUUCAAAGUGGUUGUUUCGAAAACAUUGAAAGUGAAACAUAUUUGCCUUUGAAAGUCUCAAGCCAAAUAGACACACAAGACUCUUCAGUGAAGUUCUGUAAGAAUGAGCCUCAGGAUCAUCAGGAAAGCAGACGUCUCUUUGUAAUGGAAGAAAGCACUGAGAGAAAAGUGAUAAAGGGGGAAAGUUGUUCAGAGAACCUUCAAGUUAAACUGGUGUCUGAUGG2000000006ACAAGA2000000006ACUGGCCUCGCCAUUGUUAAAUGGUGAGGCAACUUGCCAGAAUGGCCAGUUAAAAGAAUCUUUGGAUCCCAUUG2000000006ACUGUAACUGCAAAGACAUUCAUGGAUGGAAAUCACAGGUGGUCAGUUGUAGUCAGCAGAGAGCUCAUACAGAGGAGAAACCCUGUGACCAUAAUA2000000006ACUGUGGGAAAAUACUUAACACCAGCCCAGAUGGUCAUCCAUAUGAGAAAAUCCACACUGCAGAGAAACAAUACGAAUGUAGUCAGUGUGGUAAGA2000000006ACUUCAGUCAAAGCUCAGAGCUACUACUUCAUCAGAGAGACCACACAGAAGAAAAACCCUACAAAUGUGAGCAAUGUGGGAAGGGCUUCACAAGGAGCUCGAGUCUGCUUAUCCAUCAGGCAGUCCACACAGAUGAGAAGCCUUAUAAGUGUGACAAGUGUGGGAAGGGCUUCACCAGGAGCUCAAGUCUGCUCAUCCAUCAUGCCGUCCAUACAGGCGAAAAACCUUAUAAAUGUGACAAGUGUGGGAAGGGCUUUAGUCAGAGCUCCAAACUGCACAUCCACCAGCGAGUCCACACUGGAGAGAAGCCCUAUGAGUGUGAGGAGUGUGGUAUGAGCUUCAGUCAGCGCUCAAACCUGCACAUCCACCAGCGAGUACACACAGGAGAGAGGCCCUACAAGUGUGGUGAGUGUGGGAAGGGCUUCAGUCAGAGCUCGAACCUUCACAUUCACCGGUGCAUCCACACAGGAGAGAAGCCUUACCAAUGCUAUGAGUGUGGGAAGGGUUUCAGCCAGAGCUCGGAUCUUCGCAUCCAUCUCAGAGUCCACACUGGAGAGAAGCCCUAUCACUGUGGCAAGUGUGGGAAGGGAUUUAGCCAGAGUUCCAAACUCCUCAUCCACCAGAGAGUACAUACUGGAGAGAAGCCCUAUGAGUGCAGCAAGUGUGGGAAGGGCUUCAGCCAGAGCUCCAACCUUCACAUCCACCAGCGGGUUCACAAGAAAGAUCCUCGCUAACUGACAUUAGCCCAUUCAGGUCUUCACAGCGCUCAUACUGUAAAAACUGUUAAAUAUUUAGUAUCACUCUUACUUUAUAUUCUACAAAGGAGAGAGAUGUAAGGGUUAUUUAGAUAUGUUCCCUCACUGAAAAAUCACUCAUUCAAAAUAUUUAAGUAUCAAGCACUUUGUUAUGCUGUACAAUGAAUGGAUUGUUCUUGUUUCUCAGAUGGGUAGAGUAAAAGUGUCUGUACUUUACAAUUCAACUACAUGUUCUACCCAGCAUUUUAACGGCAAGA2000000006ACUUUAUAUUUAUUCUCAAGCAGGGCAUGUUUCCCUUUGUUCACAUUCUCUGAGAAAUUGAAACUCUGGUUUCUCUUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	366	428	666	672	746	842	938	1950
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	10:43558008:-	10:43557946:-	10:43557708:-	10:43557702:-	10:43557628:-	10:43557532:-	10:43557436:-	10:43556424:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 Lny8GcCeVGc9	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	5Nnepx5V7yHo gZuvgwMuBfgh msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi BtsJQJ3DteUq