General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000590099
Gene ID:	ENSG00000126581
Gene Name:	BECN1
Sequence (UNICHARACTER ENCODING)	CGGCGGCUACCGGGAAGUCGCUGAAGACAGAGCGAUGGUAGUUCUGGAGGCCUCGCUCCGGGGCCGACCCGAGGCCACAGUGCCUCCGCGGUAGЖCCGGACUUGGGUGACGGGCUCCGGGCUCCCGAGGGAUGGAAGGGUCUAAGACGUCCAACAACAGCACCAUGCAGGUGAGCUUCGUGUGCCAGCGCUGCAGCCAGCCCCUGAAACUGGACACGAGUUUCAAGAUCCUGGACCGUGUCACCAUCCAGGAACUCACAGCUCCAUUACUUACCACAGCCCAGGCGAAACCAGGAGAGACCCAGGAGGAAGAGACUAЖCUCAGGAGAGGAGCCAUUUAUUGAAACUCCUCGCCAGGAUGGUGUCUCUCGCAGAUUCAUCCCCCCAGCCAGGAUGAUGUCCACAGAAAGUGCCAACAGCUUCACUCUGAUUGGGGAGGCAUCUGAUGGCGGCACCAUGGAGAACCUCAGCCGAAGACUGAAGGUCACUGGGGACCUUUUUGACAUCAUGUCGGGCCAGACAGAUGUGGAUCACCCACUCUGUGAGGAAUGCACAGAUACUCUUUUAGЖCCAGCUGGACACUCAGCUCAACGUCACUGAAAAUGAGUGUCAGAACUACAAACGCUGUUUGGAGAUCUUAGAGCAAAUGAAUGAGGAUGACAGUGAЖCAGUUACAGAUGGAGCUAAAGGAGCUGGCACUAGAGGAGGAGAGGCUGAUCCAGGAGCUGGAAGACGUGGAAAAGAЖCCGCAAGAUAGUGGCAGAAAAUCUCGAGAAGGUCCAGGCUGAGGCUGAGAGACUGGAUCAGGAGGAAGCUCAGUAUCAGAGAGAAUACAGUGAAUUUAAACGACAGCAGCUGGAGCUGGAUGAUGAGCUGAAGAGUGUUGAAAACCAGAUGCGUUAUGCCCAGACGCAGCUGGAUAAGCUGAAGAAAACCAACGUCUPUAAUGCAACCUUCCACAUCUGGCACAGUGGACAGUUUGGCACAAUCAAUAЖCUUCAGGCUGGGUCGCCUGCCCAGUGUUCCCGUGGAAUGGAAUGAGAUUAAUGCUGCUUGGGGCCAGACUGUGUUGCUGCUCCAUGCUCUGGCCAAUAAGAUGGGUCUGAAAUUUCAGAGAUACCGACUUGUUCCUUACGGAAACCAUUCAUAUCUGGAGUCUCUGACAGACAAAUCUAAGGAGCUGCCGUUAUACUGUUCUGGGGGGUUGCGGUUUUUCUGGGACAACAAGUUUGACCAUGCAAUGGUGGCUUUCCUGGACUGUGUGCAGCAGUUCAAAGAAGAGGUUGAGAAAGGCGAGACACGUUUUUGUCUUCCCUACAGGAUGGAUGUGGAGAAAGGCAAGAUUGAAGACACAGGAGGCAGUGGCGGCUCCUAUUCCAUCAAAACCCAGUUUAЖCUCUGAGGAGCAGUGGACAAAAGCUCUCAAGUUCAUGCUGACGAAUCUUAAGUGGGGUCUUGCUUGGGUGUCCUCACAAUUUUAUAACAAAUGACUUUUUUCCUUAGGGGGAGGUUUGCCUUAAAGGCUUUUAAUUUUGUUUUGUUUGCAAЖCAUGUUUUAAAUUAAAUUCGGGUAAUAUUAAЖCAGUACAUGUUUACAAUACCAAAAAAGAAAAAAUCCACAAAAGCCACUPUAUUUUAAAAUAUCAUGUGACAGAUACUUUCCAGAGCUACAACAUGCCAUCUAUAGUUGCCAGCCCUGGUCAGUUUUGAUUCUUAACCCCAUGGЖCUCCUUUCCCUUUCUUCUCUGAAAAAAACUAAUUUAAAUUUGCUUUUCUUUUUUUUAACUGAGUUGAAUUGAGAUUGAUGUGUUUUCACUGGAUUUUUAUCUCUCUCAACUUCCUGCACUUAACAAUAUGAAAUAGAAACUUUUGUCUPUACUGAGAUGAGGAUAUGUUUGAGAUGCACAGUUGGAUAAUGUGGGAAAAUGACAUCUAAGCUPUACCUGGUCACCAUGUGAUGUGAUCAGAUGCUUGAAAUUUAЖCACUUUUCACUUGGUUCUUAUACUGAAUGCCGACUCUGCUCUGUGUUAGAGAUAUGAAAUGGUGUUUGAUACUGUUUGAGACAUUAUGGAGAGAUUUAAUUAUUUGUAAUAAAAGAUUUGCUGCAGUCUGAAAACUG
Sequence (SHORT NAMES ENCODING)	CGGCGGCUACCGGGAAGUCGCUGAAGACAGAGCGAUGGUAGUUCUGGAGGCCUCGCUCCGGGGCCGACCCGAGGCCACAGUGCCUCCGCGGUAGm6ACCGGACUUGGGUGACGGGCUCCGGGCUCCCGAGGGAUGGAAGGGUCUAAGACGUCCAACAACAGCACCAUGCAGGUGAGCUUCGUGUGCCAGCGCUGCAGCCAGCCCCUGAAACUGGACACGAGUUUCAAGAUCCUGGACCGUGUCACCAUCCAGGAACUCACAGCUCCAUUACUUACCACAGCCCAGGCGAAACCAGGAGAGACCCAGGAGGAAGAGACUAm6ACUCAGGAGAGGAGCCAUUUAUUGAAACUCCUCGCCAGGAUGGUGUCUCUCGCAGAUUCAUCCCCCCAGCCAGGAUGAUGUCCACAGAAAGUGCCAACAGCUUCACUCUGAUUGGGGAGGCAUCUGAUGGCGGCACCAUGGAGAACCUCAGCCGAAGACUGAAGGUCACUGGGGACCUUUUUGACAUCAUGUCGGGCCAGACAGAUGUGGAUCACCCACUCUGUGAGGAAUGCACAGAUACUCUUUUAGm6ACCAGCUGGACACUCAGCUCAACGUCACUGAAAAUGAGUGUCAGAACUACAAACGCUGUUUGGAGAUCUUAGAGCAAAUGAAUGAGGAUGACAGUGAm6ACAGUUACAGAUGGAGCUAAAGGAGCUGGCACUAGAGGAGGAGAGGCUGAUCCAGGAGCUGGAAGACGUGGAAAAGAm6ACCGCAAGAUAGUGGCAGAAAAUCUCGAGAAGGUCCAGGCUGAGGCUGAGAGACUGGAUCAGGAGGAAGCUCAGUAUCAGAGAGAAUACAGUGAAUUUAAACGACAGCAGCUGGAGCUGGAUGAUGAGCUGAAGAGUGUUGAAAACCAGAUGCGUUAUGCCCAGACGCAGCUGGAUAAGCUGAAGAAAACCAACGUCUYUAAUGCAACCUUCCACAUCUGGCACAGUGGACAGUUUGGCACAAUCAAUAm6ACUUCAGGCUGGGUCGCCUGCCCAGUGUUCCCGUGGAAUGGAAUGAGAUUAAUGCUGCUUGGGGCCAGACUGUGUUGCUGCUCCAUGCUCUGGCCAAUAAGAUGGGUCUGAAAUUUCAGAGAUACCGACUUGUUCCUUACGGAAACCAUUCAUAUCUGGAGUCUCUGACAGACAAAUCUAAGGAGCUGCCGUUAUACUGUUCUGGGGGGUUGCGGUUUUUCUGGGACAACAAGUUUGACCAUGCAAUGGUGGCUUUCCUGGACUGUGUGCAGCAGUUCAAAGAAGAGGUUGAGAAAGGCGAGACACGUUUUUGUCUUCCCUACAGGAUGGAUGUGGAGAAAGGCAAGAUUGAAGACACAGGAGGCAGUGGCGGCUCCUAUUCCAUCAAAACCCAGUUUAm6ACUCUGAGGAGCAGUGGACAAAAGCUCUCAAGUUCAUGCUGACGAAUCUUAAGUGGGGUCUUGCUUGGGUGUCCUCACAAUUUUAUAACAAAUGACUUUUUUCCUUAGGGGGAGGUUUGCCUUAAAGGCUUUUAAUUUUGUUUUGUUUGCAAm6ACAUGUUUUAAAUUAAAUUCGGGUAAUAUUAAm6ACAGUACAUGUUUACAAUACCAAAAAAGAAAAAAUCCACAAAAGCCACUYUAUUUUAAAAUAUCAUGUGACAGAUACUUUCCAGAGCUACAACAUGCCAUCUAUAGUUGCCAGCCCUGGUCAGUUUUGAUUCUUAACCCCAUGGm6ACUCCUUUCCCUUUCUUCUCUGAAAAAAACUAAUUUAAAUUUGCUUUUCUUUUUUUUAACUGAGUUGAAUUGAGAUUGAUGUGUUUUCACUGGAUUUUUAUCUCUCUCAACUUCCUGCACUUAACAAUAUGAAAUAGAAACUUUUGUCUYUACUGAGAUGAGGAUAUGUUUGAGAUGCACAGUUGGAUAAUGUGGGAAAAUGACAUCUAAGCUYUACCUGGUCACCAUGUGAUGUGAUCAGAUGCUUGAAAUUUAm6ACACUUUUCACUUGGUUCUUAUACUGAAUGCCGACUCUGCUCUGUGUUAGAGAUAUGAAAUGGUGUUUGAUACUGUUUGAGACAUUAUGGAGAGAUUUAAUUAUUUGUAAUAAAAGAUUUGCUGCAGUCUGAAAACUG
Sequence (MODOMICS CODE ENCODING)	CGGCGGCUACCGGGAAGUCGCUGAAGACAGAGCGAUGGUAGUUCUGGAGGCCUCGCUCCGGGGCCGACCCGAGGCCACAGUGCCUCCGCGGUAG2000000006ACCGGACUUGGGUGACGGGCUCCGGGCUCCCGAGGGAUGGAAGGGUCUAAGACGUCCAACAACAGCACCAUGCAGGUGAGCUUCGUGUGCCAGCGCUGCAGCCAGCCCCUGAAACUGGACACGAGUUUCAAGAUCCUGGACCGUGUCACCAUCCAGGAACUCACAGCUCCAUUACUUACCACAGCCCAGGCGAAACCAGGAGAGACCCAGGAGGAAGAGACUA2000000006ACUCAGGAGAGGAGCCAUUUAUUGAAACUCCUCGCCAGGAUGGUGUCUCUCGCAGAUUCAUCCCCCCAGCCAGGAUGAUGUCCACAGAAAGUGCCAACAGCUUCACUCUGAUUGGGGAGGCAUCUGAUGGCGGCACCAUGGAGAACCUCAGCCGAAGACUGAAGGUCACUGGGGACCUUUUUGACAUCAUGUCGGGCCAGACAGAUGUGGAUCACCCACUCUGUGAGGAAUGCACAGAUACUCUUUUAG2000000006ACCAGCUGGACACUCAGCUCAACGUCACUGAAAAUGAGUGUCAGAACUACAAACGCUGUUUGGAGAUCUUAGAGCAAAUGAAUGAGGAUGACAGUGA2000000006ACAGUUACAGAUGGAGCUAAAGGAGCUGGCACUAGAGGAGGAGAGGCUGAUCCAGGAGCUGGAAGACGUGGAAAAGA2000000006ACCGCAAGAUAGUGGCAGAAAAUCUCGAGAAGGUCCAGGCUGAGGCUGAGAGACUGGAUCAGGAGGAAGCUCAGUAUCAGAGAGAAUACAGUGAAUUUAAACGACAGCAGCUGGAGCUGGAUGAUGAGCUGAAGAGUGUUGAAAACCAGAUGCGUUAUGCCCAGACGCAGCUGGAUAAGCUGAAGAAAACCAACGUCU2000000009UUAAUGCAACCUUCCACAUCUGGCACAGUGGACAGUUUGGCACAAUCAAUA2000000006ACUUCAGGCUGGGUCGCCUGCCCAGUGUUCCCGUGGAAUGGAAUGAGAUUAAUGCUGCUUGGGGCCAGACUGUGUUGCUGCUCCAUGCUCUGGCCAAUAAGAUGGGUCUGAAAUUUCAGAGAUACCGACUUGUUCCUUACGGAAACCAUUCAUAUCUGGAGUCUCUGACAGACAAAUCUAAGGAGCUGCCGUUAUACUGUUCUGGGGGGUUGCGGUUUUUCUGGGACAACAAGUUUGACCAUGCAAUGGUGGCUUUCCUGGACUGUGUGCAGCAGUUCAAAGAAGAGGUUGAGAAAGGCGAGACACGUUUUUGUCUUCCCUACAGGAUGGAUGUGGAGAAAGGCAAGAUUGAAGACACAGGAGGCAGUGGCGGCUCCUAUUCCAUCAAAACCCAGUUUA2000000006ACUCUGAGGAGCAGUGGACAAAAGCUCUCAAGUUCAUGCUGACGAAUCUUAAGUGGGGUCUUGCUUGGGUGUCCUCACAAUUUUAUAACAAAUGACUUUUUUCCUUAGGGGGAGGUUUGCCUUAAAGGCUUUUAAUUUUGUUUUGUUUGCAA2000000006ACAUGUUUUAAAUUAAAUUCGGGUAAUAUUAA2000000006ACAGUACAUGUUUACAAUACCAAAAAAGAAAAAAUCCACAAAAGCCACU2000000009UUAUUUUAAAAUAUCAUGUGACAGAUACUUUCCAGAGCUACAACAUGCCAUCUAUAGUUGCCAGCCCUGGUCAGUUUUGAUUCUUAACCCCAUGG2000000006ACUCCUUUCCCUUUCUUCUCUGAAAAAAACUAAUUUAAAUUUGCUUUUCUUUUUUUUAACUGAGUUGAAUUGAGAUUGAUGUGUUUUCACUGGAUUUUUAUCUCUCUCAACUUCCUGCACUUAACAAUAUGAAAUAGAAACUUUUGUCU2000000009UUACUGAGAUGAGGAUAUGUUUGAGAUGCACAGUUGGAUAAUGUGGGAAAAUGACAUCUAAGCU2000000009UUACCUGGUCACCAUGUGAUGUGAUCAGAUGCUUGAAAUUUA2000000006ACACUUUUCACUUGGUUCUUAUACUGAAUGCCGACUCUGCUCUGUGUUAGAGAUAUGAAAUGGUGUUUGAUACUGUUUGAGACAUUAUGGAGAGAUUUAAUUAUUUGUAAUAAAAGAUUUGCUGCAGUCUGAAAACUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	95	318	567	664	741	939	990	1389	1541	1573	1622	1717	1866	1930	1972
Modification Positions	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	Y	m6A	Y	Y	m6A
Genomic Coordinates	17:42824188:-	17:42820784:-	17:42818595:-	17:42818370:-	17:42818293:-	17:42815929:-	17:42814644:-	17:42810854:-	17:42810702:-	17:42810670:-	17:42810621:-	17:42810526:-	17:42810377:-	17:42810313:-	17:42810271:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	ArijeGVTwYBw bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	nfCHyrYzE6fB bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se ArijeGVTwYBw WiQcrNTGZHPT BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G 834aFpha8RvT ksEP666umrV9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8