General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000575475
Gene ID:	ENSG00000029725
Gene Name:	RABEP1
Sequence (UNICHARACTER ENCODING)	CUCUGCCCGCGGCUGUGGCGGCGCCGGCGGAUCCAGCCUUAGCGGUUUCUCUCUGGGCGGCGGCGGCGGCGGCUCGGUUGACGCCUCCUCCGCCAGCUGAGCCCGCGGGAGCCCAGGACGCCGCUUCCCCGCCCAUCCCCGCUCCCCGAGGCCGGCCGCCUGGUCAUGGCGCAGCCGGGCCCGGCUUCCCAGCCUGACGAGGAUCUGAAGAGGCAAAAUGCAGUAUUACAAGCUGCACAAGAUGAUUUGGGACACCUUCGAACCCAGCUGUGGGAAGCUCAAGCAGAGAUGGAGAAUAUUAAGGCGAUUGCCACAGUCUCUGAGAACACCAAGCAAGAAGCUAUAGAUGAAGUGAAAAGACAGUGGAGAGAAGAAGUUGCUUCACUUCAGGCUGUUAUGAAAGAAACAGUUCGUGACUAUGAGCACCAGUUCCACCUUAGGCUGGAGCAGGAGCGAACACAGUGGGCACAGUAUAGAGAAUCCGCAGAGAGGGAAAUAGCUGAUUUAAGAAGAAGGCUGUCUGAAGGUCAAGAGGAGGAAAAUUUAGAAAAUGAAAUGAAAAAGGCCCAAGAGGAUGCUGAGAAACUUCGGUCCGUUGUGAUGCCAAUGGAAAAGGAAAUUGCAGCUUUGAAGGAUAAЖCUGACAGAGGCUGAAGACAAAAUUAAAGAGCUGGAGGCCUCAAAGGUUAAAGAACUGAAUCAUUAUCUGGAAGCUGAGAAAUCUUGUAGGACUGAUCUAGAGAUGUAUGUAGCUGUUUUGAAUACUCAGAAAUCUGUUCUACAGGAAGAUGCUGAGAAACUGCGGAAAGAAUUGCAUGAAGUUUGCCAUCUCUUGGAGCAAGAGCGACAACAACACAACCAGUUAAAACAUACGUGGCAGAAGGCCAAUGACCAGUUUCUGGAAUCUCAGCGUUUACUGAUGAGAGACAUGCAGCGAAUGGAGAUUGUGCUAACUUCAGAACAGCUCCGACAAGUUGAAGAACUGAAGAAGAAAGAUCAGGAGGAUGAUGAACAACAAAGACUCAAUAAGAGAAAGGAUCACAAAAAAGCAGAUGUUGAGGAAGAAAUAAAAAUACCAGUAGUGUGUGCUPUAACUCAAGAAGAAUCUUCAGCCCAGUUAUCAAAUGAAGAGGAGCAUUUAGACAGCACCCGUGGCUCAGUUCAUUCCUUAGAUGCAGGCUUGCUGUUGCCAUCUGGAGAUCCUUUCAGUAAAUCGGЖCAAUGACAUGUUUAAAGAUGGЖCUCAGGAGAGCACAGUCUACAGACAGCUUGGGAACCUCGGGCUCAUUGCAAUCCAAAGCUPUAGGCUAUAЖCUACAAAGCAAAAUCUGCUGGAAACCUGGACGAGUCAGAUUUUGGЖCCACUGGUAGGAGCAGAUUCAGUGUCUGAGAЖCUUUGAUACUGCAPCCCUUGGGUCACUCCAGAUGCCAAGUGGGUUUAUGUUAACCAAAGAUCAGGAAAGAGCAAUCAAGGCGAUGACACCAGAACAAGAAGAGACAGCGUCCCUCCUCUCCAGCGUUACCCAGGGCAUGGAGAGUGCCUAUGUGUCCCCUAGUGGUUAUCGUUUAGUUAGUGAAACAGAAUGGAAUCUCUUGCAGAAAGAGGUACAUAAUGCUGGAAAUAAACUUGGUAGACGUUGUGAUAUGUGUUCCAAUUACGAAAAACAGUUACAAGGAAUUCAGAUUCAGGAGGCUGAAACGAGAGACCAGGUGAAAAAACUACAGCUGAUGCUAAGGCAAGCUAAUGACCAGUUAGAGAAGACAAUGAAAGAUAAGCAGGAGCUGGAAGACUUCAUAAAGCAAAGCAGCGAAGAUUCGAGUCACCAGAUCUCUGCACUCGUCCUAAGAGCCCAGGCCUCCGAGAUCUUACUUGAAGAGUUACAGCAGGGGCUUUCCCAGGCAAAGAGGGAUGUUCAGGAACAGAUGGCGGUGCUGAUGCAGUCACGGGAACAGGUUUCAGAAGAGCUGGUGAGGUUACAGAAAGAUAAUGACAGUCUCCAGGGAAAGCACAGCCUGCAUGUGUCAUUACAGCAAGCAGAAGACUUCAPCCUCCCAGACACUACAGAGGCACUGCGGGAGUUGGUAUUAAAAUACCGUGAGGACAUCAUUAAUGUGCGGACAGCAGCAGACCACGUAGAAGAAAAGCUGAAGGCUGAGAUACUUUUCCUAAAAGAGCAGAUCCAAGCAGAACAGUGUUUAAAAGAAAAUCUUGAAGAAACUCUGCAACUAGAAAUAGAAAACUGCAAGGAGGAAAUAGCUUCUAUUUCUAGCCUAAAAGCUGAAUUAGAAAGAAUAAAAGUGGAAAAAGGACAGGUAAGUCGUGAGUUUCAAAUUAAUUCUAUCAGCAACCAGUGGUUAUUUACUGACUCCUACUAUGCUGCACCCAACGAAUAAAAAAUAGUUAAGGCAUGGGCCCUGCCUUAAGGAACUUUUGUCUUGUGGGAAGAAAACCACGGGGUAAGGGUGUGCUGGUGAUUUAUUGAGAGUGCCCUGUGUGUCAGGCUACGUUAAACUGGAGGAGGUAAGGCUAAGAUGUGACUGUGGCCUGGAGUUUCCAGUGUAGUGAGAAGAUAGGCAAGGCAUGGUCAUAACAUGUUAUAUGCUUAGAGGUACAGUAGAAAUAUGUAUAAAAAACAUUACAAACAAGAGAUGACAUUUUCUAGCUGGCUUAGUCCUCUUAGACAUCAUUAGUUCCUUUCAUAGUAACCCCAUUCAACUUCCUGACCUCACUGUUCCUUGAUUUAGAGAUUUUCACCUCCACCCUGCUCUCCCCU
Sequence (SHORT NAMES ENCODING)	CUCUGCCCGCGGCUGUGGCGGCGCCGGCGGAUCCAGCCUUAGCGGUUUCUCUCUGGGCGGCGGCGGCGGCGGCUCGGUUGACGCCUCCUCCGCCAGCUGAGCCCGCGGGAGCCCAGGACGCCGCUUCCCCGCCCAUCCCCGCUCCCCGAGGCCGGCCGCCUGGUCAUGGCGCAGCCGGGCCCGGCUUCCCAGCCUGACGAGGAUCUGAAGAGGCAAAAUGCAGUAUUACAAGCUGCACAAGAUGAUUUGGGACACCUUCGAACCCAGCUGUGGGAAGCUCAAGCAGAGAUGGAGAAUAUUAAGGCGAUUGCCACAGUCUCUGAGAACACCAAGCAAGAAGCUAUAGAUGAAGUGAAAAGACAGUGGAGAGAAGAAGUUGCUUCACUUCAGGCUGUUAUGAAAGAAACAGUUCGUGACUAUGAGCACCAGUUCCACCUUAGGCUGGAGCAGGAGCGAACACAGUGGGCACAGUAUAGAGAAUCCGCAGAGAGGGAAAUAGCUGAUUUAAGAAGAAGGCUGUCUGAAGGUCAAGAGGAGGAAAAUUUAGAAAAUGAAAUGAAAAAGGCCCAAGAGGAUGCUGAGAAACUUCGGUCCGUUGUGAUGCCAAUGGAAAAGGAAAUUGCAGCUUUGAAGGAUAAm6ACUGACAGAGGCUGAAGACAAAAUUAAAGAGCUGGAGGCCUCAAAGGUUAAAGAACUGAAUCAUUAUCUGGAAGCUGAGAAAUCUUGUAGGACUGAUCUAGAGAUGUAUGUAGCUGUUUUGAAUACUCAGAAAUCUGUUCUACAGGAAGAUGCUGAGAAACUGCGGAAAGAAUUGCAUGAAGUUUGCCAUCUCUUGGAGCAAGAGCGACAACAACACAACCAGUUAAAACAUACGUGGCAGAAGGCCAAUGACCAGUUUCUGGAAUCUCAGCGUUUACUGAUGAGAGACAUGCAGCGAAUGGAGAUUGUGCUAACUUCAGAACAGCUCCGACAAGUUGAAGAACUGAAGAAGAAAGAUCAGGAGGAUGAUGAACAACAAAGACUCAAUAAGAGAAAGGAUCACAAAAAAGCAGAUGUUGAGGAAGAAAUAAAAAUACCAGUAGUGUGUGCUYUAACUCAAGAAGAAUCUUCAGCCCAGUUAUCAAAUGAAGAGGAGCAUUUAGACAGCACCCGUGGCUCAGUUCAUUCCUUAGAUGCAGGCUUGCUGUUGCCAUCUGGAGAUCCUUUCAGUAAAUCGGm6ACAAUGACAUGUUUAAAGAUGGm6ACUCAGGAGAGCACAGUCUACAGACAGCUUGGGAACCUCGGGCUCAUUGCAAUCCAAAGCUYUAGGCUAUAm6ACUACAAAGCAAAAUCUGCUGGAAACCUGGACGAGUCAGAUUUUGGm6ACCACUGGUAGGAGCAGAUUCAGUGUCUGAGAm6ACUUUGAUACUGCAYCCCUUGGGUCACUCCAGAUGCCAAGUGGGUUUAUGUUAACCAAAGAUCAGGAAAGAGCAAUCAAGGCGAUGACACCAGAACAAGAAGAGACAGCGUCCCUCCUCUCCAGCGUUACCCAGGGCAUGGAGAGUGCCUAUGUGUCCCCUAGUGGUUAUCGUUUAGUUAGUGAAACAGAAUGGAAUCUCUUGCAGAAAGAGGUACAUAAUGCUGGAAAUAAACUUGGUAGACGUUGUGAUAUGUGUUCCAAUUACGAAAAACAGUUACAAGGAAUUCAGAUUCAGGAGGCUGAAACGAGAGACCAGGUGAAAAAACUACAGCUGAUGCUAAGGCAAGCUAAUGACCAGUUAGAGAAGACAAUGAAAGAUAAGCAGGAGCUGGAAGACUUCAUAAAGCAAAGCAGCGAAGAUUCGAGUCACCAGAUCUCUGCACUCGUCCUAAGAGCCCAGGCCUCCGAGAUCUUACUUGAAGAGUUACAGCAGGGGCUUUCCCAGGCAAAGAGGGAUGUUCAGGAACAGAUGGCGGUGCUGAUGCAGUCACGGGAACAGGUUUCAGAAGAGCUGGUGAGGUUACAGAAAGAUAAUGACAGUCUCCAGGGAAAGCACAGCCUGCAUGUGUCAUUACAGCAAGCAGAAGACUUCAYCCUCCCAGACACUACAGAGGCACUGCGGGAGUUGGUAUUAAAAUACCGUGAGGACAUCAUUAAUGUGCGGACAGCAGCAGACCACGUAGAAGAAAAGCUGAAGGCUGAGAUACUUUUCCUAAAAGAGCAGAUCCAAGCAGAACAGUGUUUAAAAGAAAAUCUUGAAGAAACUCUGCAACUAGAAAUAGAAAACUGCAAGGAGGAAAUAGCUUCUAUUUCUAGCCUAAAAGCUGAAUUAGAAAGAAUAAAAGUGGAAAAAGGACAGGUAAGUCGUGAGUUUCAAAUUAAUUCUAUCAGCAACCAGUGGUUAUUUACUGACUCCUACUAUGCUGCACCCAACGAAUAAAAAAUAGUUAAGGCAUGGGCCCUGCCUUAAGGAACUUUUGUCUUGUGGGAAGAAAACCACGGGGUAAGGGUGUGCUGGUGAUUUAUUGAGAGUGCCCUGUGUGUCAGGCUACGUUAAACUGGAGGAGGUAAGGCUAAGAUGUGACUGUGGCCUGGAGUUUCCAGUGUAGUGAGAAGAUAGGCAAGGCAUGGUCAUAACAUGUUAUAUGCUUAGAGGUACAGUAGAAAUAUGUAUAAAAAACAUUACAAACAAGAGAUGACAUUUUCUAGCUGGCUUAGUCCUCUUAGACAUCAUUAGUUCCUUUCAUAGUAACCCCAUUCAACUUCCUGACCUCACUGUUCCUUGAUUUAGAGAUUUUCACCUCCACCCUGCUCUCCCCU
Sequence (MODOMICS CODE ENCODING)	CUCUGCCCGCGGCUGUGGCGGCGCCGGCGGAUCCAGCCUUAGCGGUUUCUCUCUGGGCGGCGGCGGCGGCGGCUCGGUUGACGCCUCCUCCGCCAGCUGAGCCCGCGGGAGCCCAGGACGCCGCUUCCCCGCCCAUCCCCGCUCCCCGAGGCCGGCCGCCUGGUCAUGGCGCAGCCGGGCCCGGCUUCCCAGCCUGACGAGGAUCUGAAGAGGCAAAAUGCAGUAUUACAAGCUGCACAAGAUGAUUUGGGACACCUUCGAACCCAGCUGUGGGAAGCUCAAGCAGAGAUGGAGAAUAUUAAGGCGAUUGCCACAGUCUCUGAGAACACCAAGCAAGAAGCUAUAGAUGAAGUGAAAAGACAGUGGAGAGAAGAAGUUGCUUCACUUCAGGCUGUUAUGAAAGAAACAGUUCGUGACUAUGAGCACCAGUUCCACCUUAGGCUGGAGCAGGAGCGAACACAGUGGGCACAGUAUAGAGAAUCCGCAGAGAGGGAAAUAGCUGAUUUAAGAAGAAGGCUGUCUGAAGGUCAAGAGGAGGAAAAUUUAGAAAAUGAAAUGAAAAAGGCCCAAGAGGAUGCUGAGAAACUUCGGUCCGUUGUGAUGCCAAUGGAAAAGGAAAUUGCAGCUUUGAAGGAUAA2000000006ACUGACAGAGGCUGAAGACAAAAUUAAAGAGCUGGAGGCCUCAAAGGUUAAAGAACUGAAUCAUUAUCUGGAAGCUGAGAAAUCUUGUAGGACUGAUCUAGAGAUGUAUGUAGCUGUUUUGAAUACUCAGAAAUCUGUUCUACAGGAAGAUGCUGAGAAACUGCGGAAAGAAUUGCAUGAAGUUUGCCAUCUCUUGGAGCAAGAGCGACAACAACACAACCAGUUAAAACAUACGUGGCAGAAGGCCAAUGACCAGUUUCUGGAAUCUCAGCGUUUACUGAUGAGAGACAUGCAGCGAAUGGAGAUUGUGCUAACUUCAGAACAGCUCCGACAAGUUGAAGAACUGAAGAAGAAAGAUCAGGAGGAUGAUGAACAACAAAGACUCAAUAAGAGAAAGGAUCACAAAAAAGCAGAUGUUGAGGAAGAAAUAAAAAUACCAGUAGUGUGUGCU2000000009UUAACUCAAGAAGAAUCUUCAGCCCAGUUAUCAAAUGAAGAGGAGCAUUUAGACAGCACCCGUGGCUCAGUUCAUUCCUUAGAUGCAGGCUUGCUGUUGCCAUCUGGAGAUCCUUUCAGUAAAUCGG2000000006ACAAUGACAUGUUUAAAGAUGG2000000006ACUCAGGAGAGCACAGUCUACAGACAGCUUGGGAACCUCGGGCUCAUUGCAAUCCAAAGCU2000000009UUAGGCUAUA2000000006ACUACAAAGCAAAAUCUGCUGGAAACCUGGACGAGUCAGAUUUUGG2000000006ACCACUGGUAGGAGCAGAUUCAGUGUCUGAGA2000000006ACUUUGAUACUGCA2000000009UCCCUUGGGUCACUCCAGAUGCCAAGUGGGUUUAUGUUAACCAAAGAUCAGGAAAGAGCAAUCAAGGCGAUGACACCAGAACAAGAAGAGACAGCGUCCCUCCUCUCCAGCGUUACCCAGGGCAUGGAGAGUGCCUAUGUGUCCCCUAGUGGUUAUCGUUUAGUUAGUGAAACAGAAUGGAAUCUCUUGCAGAAAGAGGUACAUAAUGCUGGAAAUAAACUUGGUAGACGUUGUGAUAUGUGUUCCAAUUACGAAAAACAGUUACAAGGAAUUCAGAUUCAGGAGGCUGAAACGAGAGACCAGGUGAAAAAACUACAGCUGAUGCUAAGGCAAGCUAAUGACCAGUUAGAGAAGACAAUGAAAGAUAAGCAGGAGCUGGAAGACUUCAUAAAGCAAAGCAGCGAAGAUUCGAGUCACCAGAUCUCUGCACUCGUCCUAAGAGCCCAGGCCUCCGAGAUCUUACUUGAAGAGUUACAGCAGGGGCUUUCCCAGGCAAAGAGGGAUGUUCAGGAACAGAUGGCGGUGCUGAUGCAGUCACGGGAACAGGUUUCAGAAGAGCUGGUGAGGUUACAGAAAGAUAAUGACAGUCUCCAGGGAAAGCACAGCCUGCAUGUGUCAUUACAGCAAGCAGAAGACUUCA2000000009UCCUCCCAGACACUACAGAGGCACUGCGGGAGUUGGUAUUAAAAUACCGUGAGGACAUCAUUAAUGUGCGGACAGCAGCAGACCACGUAGAAGAAAAGCUGAAGGCUGAGAUACUUUUCCUAAAAGAGCAGAUCCAAGCAGAACAGUGUUUAAAAGAAAAUCUUGAAGAAACUCUGCAACUAGAAAUAGAAAACUGCAAGGAGGAAAUAGCUUCUAUUUCUAGCCUAAAAGCUGAAUUAGAAAGAAUAAAAGUGGAAAAAGGACAGGUAAGUCGUGAGUUUCAAAUUAAUUCUAUCAGCAACCAGUGGUUAUUUACUGACUCCUACUAUGCUGCACCCAACGAAUAAAAAAUAGUUAAGGCAUGGGCCCUGCCUUAAGGAACUUUUGUCUUGUGGGAAGAAAACCACGGGGUAAGGGUGUGCUGGUGAUUUAUUGAGAGUGCCCUGUGUGUCAGGCUACGUUAAACUGGAGGAGGUAAGGCUAAGAUGUGACUGUGGCCUGGAGUUUCCAGUGUAGUGAGAAGAUAGGCAAGGCAUGGUCAUAACAUGUUAUAUGCUUAGAGGUACAGUAGAAAUAUGUAUAAAAAACAUUACAAACAAGAGAUGACAUUUUCUAGCUGGCUUAGUCCUCUUAGACAUCAUUAGUUCCUUUCAUAGUAACCCCAUUCAACUUCCUGACCUCACUGUUCCUUGAUUUAGAGAUUUUCACCUCCACCCUGCUCUCCCCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	639	1090	1217	1239	1300	1310	1356	1388	1402	2042
Modification Positions	m6A	Y	m6A	m6A	Y	m6A	m6A	m6A	Y	Y
Genomic Coordinates	17:5338093:+	17:5354449:+	17:5361293:+	17:5361315:+	17:5361376:+	17:5361386:+	17:5361432:+	17:5361464:+	17:5361478:+	17:5373435:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 BkoLW2CBToyL KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G bXBqJigD9oV3 Yfn77uLS5tv8	bXBqJigD9oV3 Yfn77uLS5tv8	bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se ArijeGVTwYBw KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U ArijeGVTwYBw KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8