General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000324689
Gene ID:	ENSG00000181481
Gene Name:	RNF135
Sequence (UNICHARACTER ENCODING)	GAGACUCGCCCGGCUCAACCCCGACGUCCGCGCCCCGGCCGCCUGUUGGCCAUGGCGGGCCUGGGCCUGGGCUCCGCCGUUCCCGUGUGGCUGGCCGAGGACGACCUCGGCUGCAUCAUCUGCCAGGGGCUGCUGGЖCUGGCCCGCCACGCUGCCCUGCGGCCACAGCUUCUGCCGCCACUGCCUGGAGGCCCUGUGGGGCGCCCGCGACGCCCGCCGCUGGGCCUGCCCCACUUGCCGCCAGGGCGCCGCGCAGCAGCCGCACCUGCGGAAGAACACGCUACUGCAGGACCUGGCCGACAAGUACCGCCGCGCCGCACGCGAGAUACAGGCGGGCUCCGACCCUGCCCACUGCCCCUGCCCGGGCUCCAGUUCCCUCUCCAGCGCGGCCGCGAGGCCCCGGCGCCGCCCGGAЖCUGCAGCGGGUGGCAGUAGAGAAGAGCAUCACAGAAGUUGCUCAGGAGCUGACAGAGCUGGUGGAACAUCUUGUAGACAUUGUCAGAAGCCUGCAGAAUCAGAGGCCCCUAUCAGAAUCUGGACCAGACAACGAACUGAGCAUCCUGGGCAAGGAGAACUCCUGGAAGCCCCGUCUUCCUCCUCAUGCCCAUUGCCUGACCAGAGCCACCCUGCACUCAGGAGAGCUUCUCGGUUUGCUCAGUGGGCCAUCCAUCCAACCUUUAACUUGAAGAGCCUUUCCUGCAGCCUGGAGGUGUCCAAGGAUUCCCGUACAGUGACUGUGUCUCACCGCCCACAACCCUAUCGCUGGAGCUGUGAGAGGUUUUCUACCAGCCAGGUCUUAUGUUCCCAGGCCCUGUCUUCUGGAAAGCAUUACUGGGAAGUGGЖCACUAGGAAUUGCAGCCACUGGGCAGUUGGGGUGGCUUCCUGGGAGAUGAGCCGCGACCAGGUCCUGGGAAGGЖCUAUGGЖCUCUUGUUGUGUGGAAUGGAAGGGGACUAGCCAGCUCUCUGCAUGGCACAUGGUCAAGGAAACUGUCCUUGGCUCAGACAGЖCCUGGGGUGGUGGGCAUCUGGCUGAACCUUGAGGAGGGAAAGCUUGCCUUCUAUUCAGUGGACAAUCAGGAGAAGCUUCUGUAUGAGUGUACCAUCUCUGCCUCCUCUCCUUUGUACCCUGCCUUCUGGCUGUAUGGCUUACAPCCUGGAAAUUACCUGAUAAUAAAGCAAGUAAAGGUGUAAGGUUUCCUAAGGGAUUACAACACAGUGGUUUCCUGGUCUCUCUCCCUGUCAUCAAUCAGGGUAGUAЖCUUGACUUAAGAAUACCACUUUUUAGAAAAAUUACGAUAGAGAUGGGAUCUCACUAGGUUGCCCAGGCUGGUGUCGAAUUCCUGGUCUCAAGCAGUCCUCCCACCUCAGCCUCCCAAGGUGCUGGGAUUACAGGUGUGAGCCACCACACCUGGCCAAGAAUACCACUUUUGAAGUUAAUCCUUUUGUGUGAUACAGGAUGAACUUGGGAUGUUUGAACCCUGGACAUUCCAAAUAAAGAAUAGGCCCCUGCCUGGCUCCUGGGAGAUAACCUCUAAGCCAUUAGAAUAUCUUGCCUGAUAAGAGUGUUUUUGUUUACCUGUGGGCCUUGGGCCAUGCAGUAUCAGCUUGACCUUGCAAGGUCAAGCUGAGGAGACUAAGUUAGCCAUGUGGGCAGUGAAGCAUGCCAAUGUGAUCAAUCCCUAGUAAAAGCCCUGGACACCUAGGCAUGGGUGAGCUACUCUGGUUGGUAAUACUCUGUGCACACAUCAUUGUAGCCACACAUCAUUGCUGGGAGAAUUAAGCAUUAUCCUGAAGACUCUGCCAGGAGAGGAUAAUUGGAAGUUCUCUUGGACCUUACCUUAUGUGCCUUUCUUCAUUGCUGAUUUUAAUCUGUAUCCUUUCACUGUAAUAAACUGUAACUAUGAGUGCAA
Sequence (SHORT NAMES ENCODING)	GAGACUCGCCCGGCUCAACCCCGACGUCCGCGCCCCGGCCGCCUGUUGGCCAUGGCGGGCCUGGGCCUGGGCUCCGCCGUUCCCGUGUGGCUGGCCGAGGACGACCUCGGCUGCAUCAUCUGCCAGGGGCUGCUGGm6ACUGGCCCGCCACGCUGCCCUGCGGCCACAGCUUCUGCCGCCACUGCCUGGAGGCCCUGUGGGGCGCCCGCGACGCCCGCCGCUGGGCCUGCCCCACUUGCCGCCAGGGCGCCGCGCAGCAGCCGCACCUGCGGAAGAACACGCUACUGCAGGACCUGGCCGACAAGUACCGCCGCGCCGCACGCGAGAUACAGGCGGGCUCCGACCCUGCCCACUGCCCCUGCCCGGGCUCCAGUUCCCUCUCCAGCGCGGCCGCGAGGCCCCGGCGCCGCCCGGAm6ACUGCAGCGGGUGGCAGUAGAGAAGAGCAUCACAGAAGUUGCUCAGGAGCUGACAGAGCUGGUGGAACAUCUUGUAGACAUUGUCAGAAGCCUGCAGAAUCAGAGGCCCCUAUCAGAAUCUGGACCAGACAACGAACUGAGCAUCCUGGGCAAGGAGAACUCCUGGAAGCCCCGUCUUCCUCCUCAUGCCCAUUGCCUGACCAGAGCCACCCUGCACUCAGGAGAGCUUCUCGGUUUGCUCAGUGGGCCAUCCAUCCAACCUUUAACUUGAAGAGCCUUUCCUGCAGCCUGGAGGUGUCCAAGGAUUCCCGUACAGUGACUGUGUCUCACCGCCCACAACCCUAUCGCUGGAGCUGUGAGAGGUUUUCUACCAGCCAGGUCUUAUGUUCCCAGGCCCUGUCUUCUGGAAAGCAUUACUGGGAAGUGGm6ACACUAGGAAUUGCAGCCACUGGGCAGUUGGGGUGGCUUCCUGGGAGAUGAGCCGCGACCAGGUCCUGGGAAGGm6ACUAUGGm6ACUCUUGUUGUGUGGAAUGGAAGGGGACUAGCCAGCUCUCUGCAUGGCACAUGGUCAAGGAAACUGUCCUUGGCUCAGACAGm6ACCUGGGGUGGUGGGCAUCUGGCUGAACCUUGAGGAGGGAAAGCUUGCCUUCUAUUCAGUGGACAAUCAGGAGAAGCUUCUGUAUGAGUGUACCAUCUCUGCCUCCUCUCCUUUGUACCCUGCCUUCUGGCUGUAUGGCUUACAYCCUGGAAAUUACCUGAUAAUAAAGCAAGUAAAGGUGUAAGGUUUCCUAAGGGAUUACAACACAGUGGUUUCCUGGUCUCUCUCCCUGUCAUCAAUCAGGGUAGUAm6ACUUGACUUAAGAAUACCACUUUUUAGAAAAAUUACGAUAGAGAUGGGAUCUCACUAGGUUGCCCAGGCUGGUGUCGAAUUCCUGGUCUCAAGCAGUCCUCCCACCUCAGCCUCCCAAGGUGCUGGGAUUACAGGUGUGAGCCACCACACCUGGCCAAGAAUACCACUUUUGAAGUUAAUCCUUUUGUGUGAUACAGGAUGAACUUGGGAUGUUUGAACCCUGGACAUUCCAAAUAAAGAAUAGGCCCCUGCCUGGCUCCUGGGAGAUAACCUCUAAGCCAUUAGAAUAUCUUGCCUGAUAAGAGUGUUUUUGUUUACCUGUGGGCCUUGGGCCAUGCAGUAUCAGCUUGACCUUGCAAGGUCAAGCUGAGGAGACUAAGUUAGCCAUGUGGGCAGUGAAGCAUGCCAAUGUGAUCAAUCCCUAGUAAAAGCCCUGGACACCUAGGCAUGGGUGAGCUACUCUGGUUGGUAAUACUCUGUGCACACAUCAUUGUAGCCACACAUCAUUGCUGGGAGAAUUAAGCAUUAUCCUGAAGACUCUGCCAGGAGAGGAUAAUUGGAAGUUCUCUUGGACCUUACCUUAUGUGCCUUUCUUCAUUGCUGAUUUUAAUCUGUAUCCUUUCACUGUAAUAAACUGUAACUAUGAGUGCAA
Sequence (MODOMICS CODE ENCODING)	GAGACUCGCCCGGCUCAACCCCGACGUCCGCGCCCCGGCCGCCUGUUGGCCAUGGCGGGCCUGGGCCUGGGCUCCGCCGUUCCCGUGUGGCUGGCCGAGGACGACCUCGGCUGCAUCAUCUGCCAGGGGCUGCUGG2000000006ACUGGCCCGCCACGCUGCCCUGCGGCCACAGCUUCUGCCGCCACUGCCUGGAGGCCCUGUGGGGCGCCCGCGACGCCCGCCGCUGGGCCUGCCCCACUUGCCGCCAGGGCGCCGCGCAGCAGCCGCACCUGCGGAAGAACACGCUACUGCAGGACCUGGCCGACAAGUACCGCCGCGCCGCACGCGAGAUACAGGCGGGCUCCGACCCUGCCCACUGCCCCUGCCCGGGCUCCAGUUCCCUCUCCAGCGCGGCCGCGAGGCCCCGGCGCCGCCCGGA2000000006ACUGCAGCGGGUGGCAGUAGAGAAGAGCAUCACAGAAGUUGCUCAGGAGCUGACAGAGCUGGUGGAACAUCUUGUAGACAUUGUCAGAAGCCUGCAGAAUCAGAGGCCCCUAUCAGAAUCUGGACCAGACAACGAACUGAGCAUCCUGGGCAAGGAGAACUCCUGGAAGCCCCGUCUUCCUCCUCAUGCCCAUUGCCUGACCAGAGCCACCCUGCACUCAGGAGAGCUUCUCGGUUUGCUCAGUGGGCCAUCCAUCCAACCUUUAACUUGAAGAGCCUUUCCUGCAGCCUGGAGGUGUCCAAGGAUUCCCGUACAGUGACUGUGUCUCACCGCCCACAACCCUAUCGCUGGAGCUGUGAGAGGUUUUCUACCAGCCAGGUCUUAUGUUCCCAGGCCCUGUCUUCUGGAAAGCAUUACUGGGAAGUGG2000000006ACACUAGGAAUUGCAGCCACUGGGCAGUUGGGGUGGCUUCCUGGGAGAUGAGCCGCGACCAGGUCCUGGGAAGG2000000006ACUAUGG2000000006ACUCUUGUUGUGUGGAAUGGAAGGGGACUAGCCAGCUCUCUGCAUGGCACAUGGUCAAGGAAACUGUCCUUGGCUCAGACAG2000000006ACCUGGGGUGGUGGGCAUCUGGCUGAACCUUGAGGAGGGAAAGCUUGCCUUCUAUUCAGUGGACAAUCAGGAGAAGCUUCUGUAUGAGUGUACCAUCUCUGCCUCCUCUCCUUUGUACCCUGCCUUCUGGCUGUAUGGCUUACA2000000009UCCUGGAAAUUACCUGAUAAUAAAGCAAGUAAAGGUGUAAGGUUUCCUAAGGGAUUACAACACAGUGGUUUCCUGGUCUCUCUCCCUGUCAUCAAUCAGGGUAGUA2000000006ACUUGACUUAAGAAUACCACUUUUUAGAAAAAUUACGAUAGAGAUGGGAUCUCACUAGGUUGCCCAGGCUGGUGUCGAAUUCCUGGUCUCAAGCAGUCCUCCCACCUCAGCCUCCCAAGGUGCUGGGAUUACAGGUGUGAGCCACCACACCUGGCCAAGAAUACCACUUUUGAAGUUAAUCCUUUUGUGUGAUACAGGAUGAACUUGGGAUGUUUGAACCCUGGACAUUCCAAAUAAAGAAUAGGCCCCUGCCUGGCUCCUGGGAGAUAACCUCUAAGCCAUUAGAAUAUCUUGCCUGAUAAGAGUGUUUUUGUUUACCUGUGGGCCUUGGGCCAUGCAGUAUCAGCUUGACCUUGCAAGGUCAAGCUGAGGAGACUAAGUUAGCCAUGUGGGCAGUGAAGCAUGCCAAUGUGAUCAAUCCCUAGUAAAAGCCCUGGACACCUAGGCAUGGGUGAGCUACUCUGGUUGGUAAUACUCUGUGCACACAUCAUUGUAGCCACACAUCAUUGCUGGGAGAAUUAAGCAUUAUCCUGAAGACUCUGCCAGGAGAGGAUAAUUGGAAGUUCUCUUGGACCUUACCUUAUGUGCCUUUCUUCAUUGCUGAUUUUAAUCUGUAUCCUUUCACUGUAAUAAACUGUAACUAUGAGUGCAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	137	414	841	915	922	1004	1148	1254
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	17:30971159:+	17:30971436:+	17:30998845:+	17:30998919:+	17:30998926:+	17:30999008:+	17:30999152:+	17:30999258:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se WiQcrNTGZHPT bXBqJigD9oV3	aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn bXBqJigD9oV3	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT bXBqJigD9oV3	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn bXBqJigD9oV3 dknfVe6BK8aP	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT bXBqJigD9oV3	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr	bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8