General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000538721
Gene ID:	ENSG00000185813
Gene Name:	PCYT2
Sequence (UNICHARACTER ENCODING)	GCUCGGAGUCGCCGGGAGCUGCCAGGCUGUCCGCGCCGCCGCUGCGGGGCCAUGAUCCGGAACGGGCGCGGGGCUGCAGGCGGCGCAGAGCAGCCGGGCCCGGGGGGCAGGCGCGCCGUGAGGGUGUGGUGCGAUGGCUGCUAUGACAUGGUGCAUUACGGCCACUCCAACCAGCUGCGCCAGGCACGGGCCAUGGGUGACUACCUCAUCGUAGGCGUGCACACCGAUGAGGAGAUCGCCAAGCACAAGGGGCCCCCGGUGUUCACUCAGGAGGAGAGAUACAAGAUGGUGCAGGCCAUCAAAUGGGUGGACGAGGUGGUGCCAGCGGCUCCCUACGUCACUACACUAGAGACCCUGGACAAAUACAACUGUGACUUCUGUGUUCACGGCAAUGACAUCACCCUGACUGUAGAUGGCCGGGACACCUAUGAGGAAGUAAAGCAGGCUGGGAGGUACAGAGAAUGCAAGCGCACGCAAGGGGUGUCCACCACAGACCUCGUGGGCCGCAUGCUGCUGGUAACCAAAGCCCAUCACAGCAGCCAGGAGAUGUCCUCUGAGUACCGGGAGUAUGCAGЖCAGUUUUGGCAAGCCCCCUCACCCGAUACCCGCCGGGGACAUACUUUCCUCAGAAGGCUGCUCCCAGUGCCCUGGUGGGCGGAACCCCUGGACCGGGGUAUCCCAGUUCCUGCAGЖCAUCUCAGAAGAUCAPCCAGUUUGCUUCUGGGAAGGAGCCCCAGCCAGGGGAGACAGUCAUCUAUGUGGCUGGUGCCUUCGACCUGUUCCЖCAUCGGGCAUGUGGACUUCCUGGAGAAGGUGCACAGGCUGGCAGAGAGGCCCUACAUCAUCGCGGGCUUACACUUUGACCAGGAGGUCAAUCACUACAAGGGGAAGAACUACCCCAUCAUGAAUCUGCAUGAACGGACUCUGAGCGUGCUGGCCUGCCGGUACGUGUCAGAAGUGGUGAUUGGAGCCCCGUACGCGGUCACAGCAGAGCUCCUAAGUCACUUCAAGGUGGACCUGGUGUGUCACGGCAAGACAGAAAUUAUCCCUGACAGGGAUGGCUCCGACCCAUACCAGGAGCCCAAGAGAAGGGGCAUCUUCCGUCAGAUUGACAGUGGCAGCAACCUCACCACAGACCUCAUCGUCCAGCGGAUCAUCACCAACAGGUUGGAGUAUGAGGCGCGAAACCAGAAGAAGGAAGCCAAGGAGCUGGCCUUCCUGGAGGCUGCCAGGCAGCAGGCGGCACAGCCCCUGGGGGAGCGCGAUGGUGACUUCUAACCUGGCAGAGGCCCUGGCCGGCCCUCCCCCUGCUCUGCUUCUGCGCCUUCUGCGUUUGGЖCAUAGGЖCUCUGCAGGGCCGCCCUCUCUAACUGGCCUGGCUCUGGAAGGGCUGGUGAGGЖCUCUGCCUCCUUGCCUGCCUACAAGGUGCCUGGUUUGCAGCAGGCUCUCCGCUCUUUCCAGCAAAGCUGCUCAGAGAGGGUGUCCAGCACAGUGGAGAGGCCGGAAGUGAGACGGGCAGACGGCACCUGCAGCCUGAAACGCACCGCUCCUGCGUGCGCCCCCACCUGGUCCCCGGAUGCCCCCACCACCUGGЖCAGAGGCCACACUGЖCUGCCCACCCAGCUGUGGCGGGAGGUGCAGAGCAGAGGGCUPUAGGGAGCAGUGЖCUGCGGUCACCCCUPUAGUUCUCUGGGUGUAGЖCCACACCACCPCCCACUGGGCACCCCCCAACACGGUGUCCUGCCACCCAGCGCCUGGCUCCAGGAAAACACGC
Sequence (SHORT NAMES ENCODING)	GCUCGGAGUCGCCGGGAGCUGCCAGGCUGUCCGCGCCGCCGCUGCGGGGCCAUGAUCCGGAACGGGCGCGGGGCUGCAGGCGGCGCAGAGCAGCCGGGCCCGGGGGGCAGGCGCGCCGUGAGGGUGUGGUGCGAUGGCUGCUAUGACAUGGUGCAUUACGGCCACUCCAACCAGCUGCGCCAGGCACGGGCCAUGGGUGACUACCUCAUCGUAGGCGUGCACACCGAUGAGGAGAUCGCCAAGCACAAGGGGCCCCCGGUGUUCACUCAGGAGGAGAGAUACAAGAUGGUGCAGGCCAUCAAAUGGGUGGACGAGGUGGUGCCAGCGGCUCCCUACGUCACUACACUAGAGACCCUGGACAAAUACAACUGUGACUUCUGUGUUCACGGCAAUGACAUCACCCUGACUGUAGAUGGCCGGGACACCUAUGAGGAAGUAAAGCAGGCUGGGAGGUACAGAGAAUGCAAGCGCACGCAAGGGGUGUCCACCACAGACCUCGUGGGCCGCAUGCUGCUGGUAACCAAAGCCCAUCACAGCAGCCAGGAGAUGUCCUCUGAGUACCGGGAGUAUGCAGm6ACAGUUUUGGCAAGCCCCCUCACCCGAUACCCGCCGGGGACAUACUUUCCUCAGAAGGCUGCUCCCAGUGCCCUGGUGGGCGGAACCCCUGGACCGGGGUAUCCCAGUUCCUGCAGm6ACAUCUCAGAAGAUCAYCCAGUUUGCUUCUGGGAAGGAGCCCCAGCCAGGGGAGACAGUCAUCUAUGUGGCUGGUGCCUUCGACCUGUUCCm6ACAUCGGGCAUGUGGACUUCCUGGAGAAGGUGCACAGGCUGGCAGAGAGGCCCUACAUCAUCGCGGGCUUACACUUUGACCAGGAGGUCAAUCACUACAAGGGGAAGAACUACCCCAUCAUGAAUCUGCAUGAACGGACUCUGAGCGUGCUGGCCUGCCGGUACGUGUCAGAAGUGGUGAUUGGAGCCCCGUACGCGGUCACAGCAGAGCUCCUAAGUCACUUCAAGGUGGACCUGGUGUGUCACGGCAAGACAGAAAUUAUCCCUGACAGGGAUGGCUCCGACCCAUACCAGGAGCCCAAGAGAAGGGGCAUCUUCCGUCAGAUUGACAGUGGCAGCAACCUCACCACAGACCUCAUCGUCCAGCGGAUCAUCACCAACAGGUUGGAGUAUGAGGCGCGAAACCAGAAGAAGGAAGCCAAGGAGCUGGCCUUCCUGGAGGCUGCCAGGCAGCAGGCGGCACAGCCCCUGGGGGAGCGCGAUGGUGACUUCUAACCUGGCAGAGGCCCUGGCCGGCCCUCCCCCUGCUCUGCUUCUGCGCCUUCUGCGUUUGGm6ACAUAGGm6ACUCUGCAGGGCCGCCCUCUCUAACUGGCCUGGCUCUGGAAGGGCUGGUGAGGm6ACUCUGCCUCCUUGCCUGCCUACAAGGUGCCUGGUUUGCAGCAGGCUCUCCGCUCUUUCCAGCAAAGCUGCUCAGAGAGGGUGUCCAGCACAGUGGAGAGGCCGGAAGUGAGACGGGCAGACGGCACCUGCAGCCUGAAACGCACCGCUCCUGCGUGCGCCCCCACCUGGUCCCCGGAUGCCCCCACCACCUGGm6ACAGAGGCCACACUGm6ACUGCCCACCCAGCUGUGGCGGGAGGUGCAGAGCAGAGGGCUYUAGGGAGCAGUGm6ACUGCGGUCACCCCUYUAGUUCUCUGGGUGUAGm6ACCACACCACCYCCCACUGGGCACCCCCCAACACGGUGUCCUGCCACCCAGCGCCUGGCUCCAGGAAAACACGC
Sequence (MODOMICS CODE ENCODING)	GCUCGGAGUCGCCGGGAGCUGCCAGGCUGUCCGCGCCGCCGCUGCGGGGCCAUGAUCCGGAACGGGCGCGGGGCUGCAGGCGGCGCAGAGCAGCCGGGCCCGGGGGGCAGGCGCGCCGUGAGGGUGUGGUGCGAUGGCUGCUAUGACAUGGUGCAUUACGGCCACUCCAACCAGCUGCGCCAGGCACGGGCCAUGGGUGACUACCUCAUCGUAGGCGUGCACACCGAUGAGGAGAUCGCCAAGCACAAGGGGCCCCCGGUGUUCACUCAGGAGGAGAGAUACAAGAUGGUGCAGGCCAUCAAAUGGGUGGACGAGGUGGUGCCAGCGGCUCCCUACGUCACUACACUAGAGACCCUGGACAAAUACAACUGUGACUUCUGUGUUCACGGCAAUGACAUCACCCUGACUGUAGAUGGCCGGGACACCUAUGAGGAAGUAAAGCAGGCUGGGAGGUACAGAGAAUGCAAGCGCACGCAAGGGGUGUCCACCACAGACCUCGUGGGCCGCAUGCUGCUGGUAACCAAAGCCCAUCACAGCAGCCAGGAGAUGUCCUCUGAGUACCGGGAGUAUGCAG2000000006ACAGUUUUGGCAAGCCCCCUCACCCGAUACCCGCCGGGGACAUACUUUCCUCAGAAGGCUGCUCCCAGUGCCCUGGUGGGCGGAACCCCUGGACCGGGGUAUCCCAGUUCCUGCAG2000000006ACAUCUCAGAAGAUCA2000000009UCCAGUUUGCUUCUGGGAAGGAGCCCCAGCCAGGGGAGACAGUCAUCUAUGUGGCUGGUGCCUUCGACCUGUUCC2000000006ACAUCGGGCAUGUGGACUUCCUGGAGAAGGUGCACAGGCUGGCAGAGAGGCCCUACAUCAUCGCGGGCUUACACUUUGACCAGGAGGUCAAUCACUACAAGGGGAAGAACUACCCCAUCAUGAAUCUGCAUGAACGGACUCUGAGCGUGCUGGCCUGCCGGUACGUGUCAGAAGUGGUGAUUGGAGCCCCGUACGCGGUCACAGCAGAGCUCCUAAGUCACUUCAAGGUGGACCUGGUGUGUCACGGCAAGACAGAAAUUAUCCCUGACAGGGAUGGCUCCGACCCAUACCAGGAGCCCAAGAGAAGGGGCAUCUUCCGUCAGAUUGACAGUGGCAGCAACCUCACCACAGACCUCAUCGUCCAGCGGAUCAUCACCAACAGGUUGGAGUAUGAGGCGCGAAACCAGAAGAAGGAAGCCAAGGAGCUGGCCUUCCUGGAGGCUGCCAGGCAGCAGGCGGCACAGCCCCUGGGGGAGCGCGAUGGUGACUUCUAACCUGGCAGAGGCCCUGGCCGGCCCUCCCCCUGCUCUGCUUCUGCGCCUUCUGCGUUUGG2000000006ACAUAGG2000000006ACUCUGCAGGGCCGCCCUCUCUAACUGGCCUGGCUCUGGAAGGGCUGGUGAGG2000000006ACUCUGCCUCCUUGCCUGCCUACAAGGUGCCUGGUUUGCAGCAGGCUCUCCGCUCUUUCCAGCAAAGCUGCUCAGAGAGGGUGUCCAGCACAGUGGAGAGGCCGGAAGUGAGACGGGCAGACGGCACCUGCAGCCUGAAACGCACCGCUCCUGCGUGCGCCCCCACCUGGUCCCCGGAUGCCCCCACCACCUGG2000000006ACAGAGGCCACACUG2000000006ACUGCCCACCCAGCUGUGGCGGGAGGUGCAGAGCAGAGGGCU2000000009UUAGGGAGCAGUG2000000006ACUGCGGUCACCCCU2000000009UUAGUUCUCUGGGUGUAG2000000006ACCACACCACC2000000009UCCCACUGGGCACCCCCCAACACGGUGUCCUGCCACCCAGCGCCUGGCUCCAGGAAAACACGC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	575	691	707	782	1335	1342	1395	1589	1604	1646	1659	1674	1692	1703
Modification Positions	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	Y	m6A	Y
Genomic Coordinates	17:81907567:-	17:81906850:-	17:81906834:-	17:81906546:-	17:81904773:-	17:81904766:-	17:81904713:-	17:81904519:-	17:81904504:-	17:81904462:-	17:81904449:-	17:81904434:-	17:81904416:-	17:81904405:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	8cMbzB4aD5Se ArijeGVTwYBw BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw WiQcrNTGZHPT dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 KTLz8piFYdwC BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 KTLz8piFYdwC nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	KTLz8piFYdwC BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8