General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000581014
Gene ID:	ENSG00000179604
Gene Name:	CDC42EP4
Sequence (UNICHARACTER ENCODING)	GGAAACAAACGCCGGCGCUGACAGGGGCCGCCAGCCCCUCCGCCGCGCGGAGCCCACGAAGGGGACAGCGCAGCCGGCCCAGAGCUCGGGUCUCCGGGGACCGAGCCUUAUGAUCUCCUCAUUGCGUCCCCCUCUGCCCACUGGACUUGGACUUCAGAUCUGACCCCAGACCUGCCGGCUACCUCGGGAGGGCCCACCUCCCCGCCCAUCCAGCAAGAUGCCAAUCCUCAAGCAACUGGUGUCCAGCUCGGUGCACUCCAAGCGCCGUUCCCGAGCGGACCUCACGGCCGAGAUGAUCAGCGCCCCGCUGGGCGACUUCCGCCACACCAUGCACCAGCUCCCUCUCCAGCUGCACCUCAGGCAPCCUGGAGGAGCGCAGCCCUGCCUUCCGGGGGCCGGACAGGGCCCGGGCUGCUGUCUCAAGACAGCCAGACAAGGAGUUCUCCUUCAUGGAUGAGGAGGAGGAGGAUGAAAUCCGUGUGUGAGGCGGЖCAGUGGGUGGCCACCGGGAGCUCUUGGCUGCAUCUUCUCCCUGCCCCCACCCCACUAUGACCUUUGACCCUACGGCGCAGGGGCAGCCAGGЖCCCUUGAUUCAGЖCCAUGGЖCCCUGGЖCCUUGUAGAUGAGGGЖCACUGGCCUGGCCCUCGGGUCUUCGGAGGЖCGUAGGGGGCUGGCAUGGGUGCCGACUGGCUGCCUGACUUCAUCAUGCUCCCUGCACUUAGGCUGCGUGGGЖCAAGGGCUG
Sequence (SHORT NAMES ENCODING)	GGAAACAAACGCCGGCGCUGACAGGGGCCGCCAGCCCCUCCGCCGCGCGGAGCCCACGAAGGGGACAGCGCAGCCGGCCCAGAGCUCGGGUCUCCGGGGACCGAGCCUUAUGAUCUCCUCAUUGCGUCCCCCUCUGCCCACUGGACUUGGACUUCAGAUCUGACCCCAGACCUGCCGGCUACCUCGGGAGGGCCCACCUCCCCGCCCAUCCAGCAAGAUGCCAAUCCUCAAGCAACUGGUGUCCAGCUCGGUGCACUCCAAGCGCCGUUCCCGAGCGGACCUCACGGCCGAGAUGAUCAGCGCCCCGCUGGGCGACUUCCGCCACACCAUGCACCAGCUCCCUCUCCAGCUGCACCUCAGGCAYCCUGGAGGAGCGCAGCCCUGCCUUCCGGGGGCCGGACAGGGCCCGGGCUGCUGUCUCAAGACAGCCAGACAAGGAGUUCUCCUUCAUGGAUGAGGAGGAGGAGGAUGAAAUCCGUGUGUGAGGCGGm6ACAGUGGGUGGCCACCGGGAGCUCUUGGCUGCAUCUUCUCCCUGCCCCCACCCCACUAUGACCUUUGACCCUACGGCGCAGGGGCAGCCAGGm6ACCCUUGAUUCAGm6ACCAUGGm6ACCCUGGm6ACCUUGUAGAUGAGGGm6ACACUGGCCUGGCCCUCGGGUCUUCGGAGGm6ACGUAGGGGGCUGGCAUGGGUGCCGACUGGCUGCCUGACUUCAUCAUGCUCCCUGCACUUAGGCUGCGUGGGm6ACAAGGGCUG
Sequence (MODOMICS CODE ENCODING)	GGAAACAAACGCCGGCGCUGACAGGGGCCGCCAGCCCCUCCGCCGCGCGGAGCCCACGAAGGGGACAGCGCAGCCGGCCCAGAGCUCGGGUCUCCGGGGACCGAGCCUUAUGAUCUCCUCAUUGCGUCCCCCUCUGCCCACUGGACUUGGACUUCAGAUCUGACCCCAGACCUGCCGGCUACCUCGGGAGGGCCCACCUCCCCGCCCAUCCAGCAAGAUGCCAAUCCUCAAGCAACUGGUGUCCAGCUCGGUGCACUCCAAGCGCCGUUCCCGAGCGGACCUCACGGCCGAGAUGAUCAGCGCCCCGCUGGGCGACUUCCGCCACACCAUGCACCAGCUCCCUCUCCAGCUGCACCUCAGGCA2000000009UCCUGGAGGAGCGCAGCCCUGCCUUCCGGGGGCCGGACAGGGCCCGGGCUGCUGUCUCAAGACAGCCAGACAAGGAGUUCUCCUUCAUGGAUGAGGAGGAGGAGGAUGAAAUCCGUGUGUGAGGCGG2000000006ACAGUGGGUGGCCACCGGGAGCUCUUGGCUGCAUCUUCUCCCUGCCCCCACCCCACUAUGACCUUUGACCCUACGGCGCAGGGGCAGCCAGG2000000006ACCCUUGAUUCAG2000000006ACCAUGG2000000006ACCCUGG2000000006ACCUUGUAGAUGAGGG2000000006ACACUGGCCUGGCCCUCGGGUCUUCGGAGG2000000006ACGUAGGGGGCUGGCAUGGGUGCCGACUGGCUGCCUGACUUCAUCAUGCUCCCUGCACUUAGGCUGCGUGGG2000000006ACAAGGGCUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	364	491	583	596	603	610	626	656	728
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	17:73285551:-	17:73285424:-	17:73285332:-	17:73285319:-	17:73285312:-	17:73285305:-	17:73285289:-	17:73285259:-	17:73285187:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 BkoLW2CBToyL UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB 93arJtwJmuS9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd aJksAshEgQ8U D6ncpa2PPWj3 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT nGifePrmgHfe Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn UKen6WEino9G Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8