General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000577886
Gene ID:	ENSG00000221926
Gene Name:	TRIM16
Sequence (UNICHARACTER ENCODING)	GUGCCUCCCGGCUGGUUUCUGAGAUCAGCCACAGAAGUUAAACUUCUUUCCAGGGAAGAAGGGCGGGGAUGUCAGGGCUGGAGAGUGCCCGUGUCCUUCUGUGUGCAUUGGGCUCCUUCCPCCUUAAUUCUCUGCUUUCCACUUUUAGGCUGAACUCCAGUGCACCCAGUUAGACUUGGAGCGGAAACUCAAGUUGAAUGAAAAUGCCAUCUCCAGGCUCCAGGCUAACCAAAAGUCUGUUCUGGUGUCGGUGUCAGAGGUCAAAGCGGUGGCUGAAAUGCAGUUUGGGGAACUCCUUGCUGCUGUGAGGAAGGCCCAGGCCAAUGUGAUGCUCUUCUUAGAGGAGAAGGAGCAAGCUGCGCUGAGCCAGGCCAACGGUAUCAAGGCCCACCUGGAGUACAGGAGUGCCGAGAUGGAGAAGAGCAAGCAGGAGCUGGAGAGGAUGGCGGCCAUCAGCAACACUGUCCAGUUCUUGGAGGAGUACUGCAAGUUUAAGAACACUGAAGACAUCACCUUCCCUAGUGUUUACGUAGGGCUGAAGGAUAAACUCUCGGGCAPCCGCAAAGUUAUCACGGAAUCCACUGUACACUUAAUCCAGUUGCUGGAGAACUAUAAGAAAAAGCUCCAGGAGUUUUCCAAGGAAGAGGAGUAUGACAUCAGAACUCAAGUGUCUGCCGUUGUUCAGCGCAAAUAUUGGACUUCCAAACCUGAGCCCAGCACCAGGGAACAGUUCCUCCAAUAUGCGUAUGACAUCACGUUUGACCCGGACACAGCACACAAGUAUCUCCGGCUGCAGGAGGAGAACCGCAAGGUCACCAACACCACGCCCUGGGAGCAUCCCUACCCGGACCUCCCCAGCAGGUUCCUGCACUGGCGGCAGGUGCUGUCCCAGCAGAGUCUGUACCUGCACAGGUACUAUUUUGAGGUGGAGAUCUUCGGGGCAGGCACCUAUGUUGGCCUGACCUGCAAAGGCAUCGACCGGAAAGGGGAGGAGCGCAACAGUUGCAUUUCCGGAAACAACUUCUCCUGGAGCCUCCAAUGGAACGGGAAGGAGUUCACGGCCUGGUACAGUGACAUGGAGACCCCACUCAAAGCUGGCCCUUUCCGGAGGCUCGGGGUCUAUAUCGACUUCCCGGGAGGGAUCCUUUCCUUCUAUGGCGUAGAGUAUGAUACCAUGЖCUCUGGUUCACAAGUUUGCCUGCAAAUUUUCAGAACCAGUCUAUGCUGCCUUCUGGCUUUCCAAGAAGGAAAACGCCAUCCGGAUUGUAGAUCUGGGAGAGGAACCCGAGAAGCCAGCACCGUCCUUGGUGGGGЖCUGCUCCCUAGACUCCAGGAGCCAUAUCCCAGACCUUUGCCAGCUACЖGUGAUGGGAUPUGCAUUUUAGGGUGAUUUGGGGGCAGAAAUAЖCUGCUGAUGGUAGCUGGCUUUUGAAAUCCUAUGGGGUCUCUGAAUGAAAACAUUCUCCAGCUGCUCUCUUUUGCUCCAUAUGGUGCUGUUCUCUAUGUGUUUGCAGUAAUUCUUUUUUUUUUUUUUGAGACGGAGUCUCGCACUGUUGCCCAGGCUGGAGAGCAGUGGCGCGAUCUUGGCUCACUGCAAGCUCCGCCUCCCGAGUUCAAGCAAUUCUCCUGCCUCAGCCUCCCGAGUAGCUGGGAUUACЖGGUGCCUGCCACCACACCCAGCUAAUGUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACCAUGUUGGCCAGGCAGAUCUCAAACUCCUGACCUCGUGAUGCACCCACCUCGGCCUCCCAAAGUGCUGGGAUUACAUGCGUGAGCCACUGCGCCCUGCCUGUUUGUAGUAAUUUUUAGGCACCAAAUCUCCCUCAUCUUCUAGUGCCAUUCUCCUCUCUGUUCAGGUAAAUGUCACACUGUGCCCAGAAUGGAUGACCAGGAACCUUAAAGAGUGGCUGAAAAGAUUGCAGAGUUAUCAUAAUAAAUUGCUAЖCUUGCGUAUUUCCU
Sequence (SHORT NAMES ENCODING)	GUGCCUCCCGGCUGGUUUCUGAGAUCAGCCACAGAAGUUAAACUUCUUUCCAGGGAAGAAGGGCGGGGAUGUCAGGGCUGGAGAGUGCCCGUGUCCUUCUGUGUGCAUUGGGCUCCUUCCYCCUUAAUUCUCUGCUUUCCACUUUUAGGCUGAACUCCAGUGCACCCAGUUAGACUUGGAGCGGAAACUCAAGUUGAAUGAAAAUGCCAUCUCCAGGCUCCAGGCUAACCAAAAGUCUGUUCUGGUGUCGGUGUCAGAGGUCAAAGCGGUGGCUGAAAUGCAGUUUGGGGAACUCCUUGCUGCUGUGAGGAAGGCCCAGGCCAAUGUGAUGCUCUUCUUAGAGGAGAAGGAGCAAGCUGCGCUGAGCCAGGCCAACGGUAUCAAGGCCCACCUGGAGUACAGGAGUGCCGAGAUGGAGAAGAGCAAGCAGGAGCUGGAGAGGAUGGCGGCCAUCAGCAACACUGUCCAGUUCUUGGAGGAGUACUGCAAGUUUAAGAACACUGAAGACAUCACCUUCCCUAGUGUUUACGUAGGGCUGAAGGAUAAACUCUCGGGCAYCCGCAAAGUUAUCACGGAAUCCACUGUACACUUAAUCCAGUUGCUGGAGAACUAUAAGAAAAAGCUCCAGGAGUUUUCCAAGGAAGAGGAGUAUGACAUCAGAACUCAAGUGUCUGCCGUUGUUCAGCGCAAAUAUUGGACUUCCAAACCUGAGCCCAGCACCAGGGAACAGUUCCUCCAAUAUGCGUAUGACAUCACGUUUGACCCGGACACAGCACACAAGUAUCUCCGGCUGCAGGAGGAGAACCGCAAGGUCACCAACACCACGCCCUGGGAGCAUCCCUACCCGGACCUCCCCAGCAGGUUCCUGCACUGGCGGCAGGUGCUGUCCCAGCAGAGUCUGUACCUGCACAGGUACUAUUUUGAGGUGGAGAUCUUCGGGGCAGGCACCUAUGUUGGCCUGACCUGCAAAGGCAUCGACCGGAAAGGGGAGGAGCGCAACAGUUGCAUUUCCGGAAACAACUUCUCCUGGAGCCUCCAAUGGAACGGGAAGGAGUUCACGGCCUGGUACAGUGACAUGGAGACCCCACUCAAAGCUGGCCCUUUCCGGAGGCUCGGGGUCUAUAUCGACUUCCCGGGAGGGAUCCUUUCCUUCUAUGGCGUAGAGUAUGAUACCAUGm6ACUCUGGUUCACAAGUUUGCCUGCAAAUUUUCAGAACCAGUCUAUGCUGCCUUCUGGCUUUCCAAGAAGGAAAACGCCAUCCGGAUUGUAGAUCUGGGAGAGGAACCCGAGAAGCCAGCACCGUCCUUGGUGGGGm6ACUGCUCCCUAGACUCCAGGAGCCAUAUCCCAGACCUUUGCCAGCUACm6AGUGAUGGGAUYUGCAUUUUAGGGUGAUUUGGGGGCAGAAAUAm6ACUGCUGAUGGUAGCUGGCUUUUGAAAUCCUAUGGGGUCUCUGAAUGAAAACAUUCUCCAGCUGCUCUCUUUUGCUCCAUAUGGUGCUGUUCUCUAUGUGUUUGCAGUAAUUCUUUUUUUUUUUUUUGAGACGGAGUCUCGCACUGUUGCCCAGGCUGGAGAGCAGUGGCGCGAUCUUGGCUCACUGCAAGCUCCGCCUCCCGAGUUCAAGCAAUUCUCCUGCCUCAGCCUCCCGAGUAGCUGGGAUUACm6AGGUGCCUGCCACCACACCCAGCUAAUGUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACCAUGUUGGCCAGGCAGAUCUCAAACUCCUGACCUCGUGAUGCACCCACCUCGGCCUCCCAAAGUGCUGGGAUUACAUGCGUGAGCCACUGCGCCCUGCCUGUUUGUAGUAAUUUUUAGGCACCAAAUCUCCCUCAUCUUCUAGUGCCAUUCUCCUCUCUGUUCAGGUAAAUGUCACACUGUGCCCAGAAUGGAUGACCAGGAACCUUAAAGAGUGGCUGAAAAGAUUGCAGAGUUAUCAUAAUAAAUUGCUAm6ACUUGCGUAUUUCCU
Sequence (MODOMICS CODE ENCODING)	GUGCCUCCCGGCUGGUUUCUGAGAUCAGCCACAGAAGUUAAACUUCUUUCCAGGGAAGAAGGGCGGGGAUGUCAGGGCUGGAGAGUGCCCGUGUCCUUCUGUGUGCAUUGGGCUCCUUCC2000000009UCCUUAAUUCUCUGCUUUCCACUUUUAGGCUGAACUCCAGUGCACCCAGUUAGACUUGGAGCGGAAACUCAAGUUGAAUGAAAAUGCCAUCUCCAGGCUCCAGGCUAACCAAAAGUCUGUUCUGGUGUCGGUGUCAGAGGUCAAAGCGGUGGCUGAAAUGCAGUUUGGGGAACUCCUUGCUGCUGUGAGGAAGGCCCAGGCCAAUGUGAUGCUCUUCUUAGAGGAGAAGGAGCAAGCUGCGCUGAGCCAGGCCAACGGUAUCAAGGCCCACCUGGAGUACAGGAGUGCCGAGAUGGAGAAGAGCAAGCAGGAGCUGGAGAGGAUGGCGGCCAUCAGCAACACUGUCCAGUUCUUGGAGGAGUACUGCAAGUUUAAGAACACUGAAGACAUCACCUUCCCUAGUGUUUACGUAGGGCUGAAGGAUAAACUCUCGGGCA2000000009UCCGCAAAGUUAUCACGGAAUCCACUGUACACUUAAUCCAGUUGCUGGAGAACUAUAAGAAAAAGCUCCAGGAGUUUUCCAAGGAAGAGGAGUAUGACAUCAGAACUCAAGUGUCUGCCGUUGUUCAGCGCAAAUAUUGGACUUCCAAACCUGAGCCCAGCACCAGGGAACAGUUCCUCCAAUAUGCGUAUGACAUCACGUUUGACCCGGACACAGCACACAAGUAUCUCCGGCUGCAGGAGGAGAACCGCAAGGUCACCAACACCACGCCCUGGGAGCAUCCCUACCCGGACCUCCCCAGCAGGUUCCUGCACUGGCGGCAGGUGCUGUCCCAGCAGAGUCUGUACCUGCACAGGUACUAUUUUGAGGUGGAGAUCUUCGGGGCAGGCACCUAUGUUGGCCUGACCUGCAAAGGCAUCGACCGGAAAGGGGAGGAGCGCAACAGUUGCAUUUCCGGAAACAACUUCUCCUGGAGCCUCCAAUGGAACGGGAAGGAGUUCACGGCCUGGUACAGUGACAUGGAGACCCCACUCAAAGCUGGCCCUUUCCGGAGGCUCGGGGUCUAUAUCGACUUCCCGGGAGGGAUCCUUUCCUUCUAUGGCGUAGAGUAUGAUACCAUG2000000006ACUCUGGUUCACAAGUUUGCCUGCAAAUUUUCAGAACCAGUCUAUGCUGCCUUCUGGCUUUCCAAGAAGGAAAACGCCAUCCGGAUUGUAGAUCUGGGAGAGGAACCCGAGAAGCCAGCACCGUCCUUGGUGGGG2000000006ACUGCUCCCUAGACUCCAGGAGCCAUAUCCCAGACCUUUGCCAGCUAC2000000006AGUGAUGGGAU2000000009UUGCAUUUUAGGGUGAUUUGGGGGCAGAAAUA2000000006ACUGCUGAUGGUAGCUGGCUUUUGAAAUCCUAUGGGGUCUCUGAAUGAAAACAUUCUCCAGCUGCUCUCUUUUGCUCCAUAUGGUGCUGUUCUCUAUGUGUUUGCAGUAAUUCUUUUUUUUUUUUUUGAGACGGAGUCUCGCACUGUUGCCCAGGCUGGAGAGCAGUGGCGCGAUCUUGGCUCACUGCAAGCUCCGCCUCCCGAGUUCAAGCAAUUCUCCUGCCUCAGCCUCCCGAGUAGCUGGGAUUAC2000000006AGGUGCCUGCCACCACACCCAGCUAAUGUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACCAUGUUGGCCAGGCAGAUCUCAAACUCCUGACCUCGUGAUGCACCCACCUCGGCCUCCCAAAGUGCUGGGAUUACAUGCGUGAGCCACUGCGCCCUGCCUGUUUGUAGUAAUUUUUAGGCACCAAAUCUCCCUCAUCUUCUAGUGCCAUUCUCCUCUCUGUUCAGGUAAAUGUCACACUGUGCCCAGAAUGGAUGACCAGGAACCUUAAAGAGUGGCUGAAAAGAUUGCAGAGUUAUCAUAAUAAAUUGCUA2000000006ACUUGCGUAUUUCCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	121	558	1178	1313	1361	1372	1404	1654	1965
Modification Positions	Y	Y	m6A	m6A	m6A	Y	m6A	m6A	m6A
Genomic Coordinates	17:15642844:-	17:15632595:-	17:15628761:-	17:15628626:-	17:15628578:-	17:15628567:-	17:15628535:-	17:15628285:-	17:15627974:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 f6YSioLdAWpr	bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp aivdrAsbdKEU gZuvgwMuBfgh nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd aJksAshEgQ8U Lny8GcCeVGc9 bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	Lny8GcCeVGc9 UKen6WEino9G bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8