General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000393328
Gene ID:	ENSG00000121067
Gene Name:	SPOP
Sequence (UNICHARACTER ENCODING)	GUGCUGACGCCAUGACGCCCCGGCUGGUGUGUGUCGGUGUGUAUGUGUGUGUGUGAGUGUGCGCGCUCCGAGUGUGUGUGUAUUUGUGUAUCGGCGGUCCCGCAGGUCCCGGAUGUUGCGGACAGUAUGAGGCAAGCGCAGGGGGACGGGGACCAGCAGCUGUCGCCGCCGCUCUCAGAUCGAGUCUUGCUCUGUCACCCAGGCUGGAGUGCAGUGGCGCGAUCUCAGCUCACUGCCACCUUUGCCUCCUGGGUUCAAGCGAUUCUUCUGCCUCAGCCUCCCGAGUAGCUGGGAUUACAGGGUGAAGAGGGAACAGAAAUCUUUGCCCCCUGACUUUGGAAAUCUCGUUUAACCUUCAAACUGGCGAUGUCAAGGGUUCCAAGUCCPCCACCPCCGGCAGAAAUGUCGAGUGGCCCCGUAGCUGAGAGUUGGUGCUACACACAGAUCAAGGUAGUGAAAUUCUCCUACAUGUGGACCAUCAAUAACUPUAGCUUUUGCCGGGAGGAAAUGGGUGAAGUCAUUAAAAGUUCUACAUUUUCAUCAGGAGCAAAUGAUAAACUGAAAUGGUGUUUGCGAGUAAACCCCAAAGGGUUAGAUGAAGAAAGCAAAGAUUACCUGUCACUPUACCUGUUACUGGUCAGCUGUCCAAAGAGUGAAGUUCGGGCAAAAUUCAAAUUCUCCAPCCUGAAUGCCAAGGGAGAAGAAACCAAAGCUAUGGAGAGUCAACGGGCAUAUAGGUUUGUGCAAGGCAAAGACUGGGGAUUCAAGAAAUUCAPCCGUAGAGAUUUUCUUUUGGAUGAGGCCAACGGGCUUCUCCCUGAUGЖCAAGCUUACCCUCUUCUGCGAGGUGAGUGUUGUGCAAGAUUCUGUCAACAUUUCUGGCCAGAAUACCAUGAACAUGGUAAAGGUUCCUGAGUGCCGGCUGGCAGAUGAGUUAGGAGGACUGUGGGAGAAUUCCCGGUUCACAGACUGCUGCUUGUGUGUUGCCGGCCAGGAAUUCCAGGCUCACAAGGCUAUCUUAGCAGCUCGUUCUCCGGUUUUUAGUGCCAUGUUUGAACAUGAAAUGGAGGAGAGCAAAAAGAAUCGAGUUGAAAUCAAUGAUGUGGAGCCUGAAGUUUUUAAGGAAAUGAUGUGCUUCAUUUACACGGGGAAGGCUCCAAACCUCGACAAAAUGGCUGAUGAUPUGCUGGCAGCUGCUGACAAGUAUGCCCUGGAGCGCUUAAAGGUCAUGUGUGAGGAUGCCCUCUGCAGUAACCUGUCCGUGGAGAACGCUGCAGAAAUUCUCAPCCUGGCCGACCUCCACAGUGCAGAUCAGUUGAAAACUCAGGCAGUGGAUUUCAUCAACUAUCAUGCUUCGGAUGUCUUGGAGACCUCUGGGUGGAAGUCAAUGGUGGUGUCACAPCCCCACUUGGUGGCUGAGGCAUACCGCUCUCUGGCUUCAGCACAGUGCCCUUUUCUGGGACCCCCACGCAAACGCCUGAAGCAAUCCUAAGAUCCUGCUUGUUGUAAGЖCUCCGUUUAAUUUCCAGAAGCAGCAGCCACUGUUGCUGCCACUGACCACCAGGUAGACAGCGCAAUCUGUGGAGCUUUUACUCUGUUGUGAGGGGAAGAGЖCUGCAUUGUGGCCCCAGЖCUUUUAAAACAGCACUAAAUAЖCUUGGGGGAAACGGGGGGAGGGAAAAUGAAAUGAAAACCCUGUUGCUGCGUCACUGUGUUCCCUUUGGCCUGGCUGAGUUUGAUACUGUGGGGAUUCAGUUUAGGCGCUGGCCCGAGGAUAUCCCAGCGGUGGUACUUCGGAGACACCUGUCUGCAUCUGACUGAGCAGAACAAAUCGUCAGGUGCCUGGAGCAAAAAGGAAAAAAAAAAAAGAAAGGЖCAUUGAGUUUUAACAGAAGGGAAAAGGAAAGAAGAAAAGAUUUUUGCAGAAUUUCUCAAAAAUCAGUUUGUGGAUUCCAGUAGUAUUUAUAUUGAGAGAAACAAAUUUUAGUCCUUCUAЖCUGUGCUAAAACUUGGAUAUUUGUGAAAACUCCUUACCACCAUACAAGCAUCAGAAGAGCUCUCUUGUUGUUAGCACUUAUUGUUUGCAAGAЖCAGAAUACAPCCUUUUAUCCUUUUAUGAAAAAUGACAAGUGAAGGCAAAAGGGGAAGGUUAUUUGAUCUGGAAGAUGAGUGUUCUGAUGUGGUGGCUUUUGCAAAAAUCUPUAUUGGUGUUGAAAACUGGAAAAAAUAЖCUCAPCCAGAAUUCAUAUUGUCUUGACAAGAЖCUAUGGUUCUCUGUUUUUAGAUAUUGUGGAAAAUGUUUUUGGGCAUUUUUCUCUGAUUUUAUUUCUUCUCCCCCACCCCUUUUUCUAAAAAACAAACAAAAAAAAAAACACACAAAACAAAAACAGAACAAAAGAAGAGAGAAGGAAAUUUUAUCAAUUAAAAAUGCUGUGUGAUAAAAUCCCAGCCCAGAUUGCUCAGCUGUUUGUACCUGACUUGCCGCCUGCAUAGGAGCCAGUUCUGUUCCUUCUGACUAGCCCCUCUUCCPCCAGGGGAGAACUUCCAAAUGUUAAUUUUUUUUUUUUUGAAAAUAUAAAUAAUUACUAUUUUGUACUGUGUGGUAUCUCUGGUCUUUUGUUUCACUCACCUGCCUUGUCUCUUGGGUCUGAGUCCCUUGCUUAAGGGAUUUUGAAGUCCUAGUUUUCAGCUUGCAGAGAUUAUGUCUGAAAUGCCUAAUGAGUCGCAGGGAUUUGUUGAGACUCCGUAAUCUCAAGUUCUCUUUGUGAGCUAUCAGCAUCUGCCAGUCUCUUGUCCUCCCUGAGUAUCUCACAGUCCAUAUCCUGAUGAGGGAUCAGGCCCCUACCUCUGCCAAGGCAAGUAAUGGUAGUGGGCUUUUAAACUGCCCCCCGUAUGUUUUAAGACCUAAUCCCCACCUCCCUUCUUCUAACUAAAUAUAAAAAGAUCCAGGGGACAUAAAUGUGGAGAUUAAAUAAAGGGAAAUUAUUGUCUCUAA
Sequence (SHORT NAMES ENCODING)	GUGCUGACGCCAUGACGCCCCGGCUGGUGUGUGUCGGUGUGUAUGUGUGUGUGUGAGUGUGCGCGCUCCGAGUGUGUGUGUAUUUGUGUAUCGGCGGUCCCGCAGGUCCCGGAUGUUGCGGACAGUAUGAGGCAAGCGCAGGGGGACGGGGACCAGCAGCUGUCGCCGCCGCUCUCAGAUCGAGUCUUGCUCUGUCACCCAGGCUGGAGUGCAGUGGCGCGAUCUCAGCUCACUGCCACCUUUGCCUCCUGGGUUCAAGCGAUUCUUCUGCCUCAGCCUCCCGAGUAGCUGGGAUUACAGGGUGAAGAGGGAACAGAAAUCUUUGCCCCCUGACUUUGGAAAUCUCGUUUAACCUUCAAACUGGCGAUGUCAAGGGUUCCAAGUCCYCCACCYCCGGCAGAAAUGUCGAGUGGCCCCGUAGCUGAGAGUUGGUGCUACACACAGAUCAAGGUAGUGAAAUUCUCCUACAUGUGGACCAUCAAUAACUYUAGCUUUUGCCGGGAGGAAAUGGGUGAAGUCAUUAAAAGUUCUACAUUUUCAUCAGGAGCAAAUGAUAAACUGAAAUGGUGUUUGCGAGUAAACCCCAAAGGGUUAGAUGAAGAAAGCAAAGAUUACCUGUCACUYUACCUGUUACUGGUCAGCUGUCCAAAGAGUGAAGUUCGGGCAAAAUUCAAAUUCUCCAYCCUGAAUGCCAAGGGAGAAGAAACCAAAGCUAUGGAGAGUCAACGGGCAUAUAGGUUUGUGCAAGGCAAAGACUGGGGAUUCAAGAAAUUCAYCCGUAGAGAUUUUCUUUUGGAUGAGGCCAACGGGCUUCUCCCUGAUGm6ACAAGCUUACCCUCUUCUGCGAGGUGAGUGUUGUGCAAGAUUCUGUCAACAUUUCUGGCCAGAAUACCAUGAACAUGGUAAAGGUUCCUGAGUGCCGGCUGGCAGAUGAGUUAGGAGGACUGUGGGAGAAUUCCCGGUUCACAGACUGCUGCUUGUGUGUUGCCGGCCAGGAAUUCCAGGCUCACAAGGCUAUCUUAGCAGCUCGUUCUCCGGUUUUUAGUGCCAUGUUUGAACAUGAAAUGGAGGAGAGCAAAAAGAAUCGAGUUGAAAUCAAUGAUGUGGAGCCUGAAGUUUUUAAGGAAAUGAUGUGCUUCAUUUACACGGGGAAGGCUCCAAACCUCGACAAAAUGGCUGAUGAUYUGCUGGCAGCUGCUGACAAGUAUGCCCUGGAGCGCUUAAAGGUCAUGUGUGAGGAUGCCCUCUGCAGUAACCUGUCCGUGGAGAACGCUGCAGAAAUUCUCAYCCUGGCCGACCUCCACAGUGCAGAUCAGUUGAAAACUCAGGCAGUGGAUUUCAUCAACUAUCAUGCUUCGGAUGUCUUGGAGACCUCUGGGUGGAAGUCAAUGGUGGUGUCACAYCCCCACUUGGUGGCUGAGGCAUACCGCUCUCUGGCUUCAGCACAGUGCCCUUUUCUGGGACCCCCACGCAAACGCCUGAAGCAAUCCUAAGAUCCUGCUUGUUGUAAGm6ACUCCGUUUAAUUUCCAGAAGCAGCAGCCACUGUUGCUGCCACUGACCACCAGGUAGACAGCGCAAUCUGUGGAGCUUUUACUCUGUUGUGAGGGGAAGAGm6ACUGCAUUGUGGCCCCAGm6ACUUUUAAAACAGCACUAAAUAm6ACUUGGGGGAAACGGGGGGAGGGAAAAUGAAAUGAAAACCCUGUUGCUGCGUCACUGUGUUCCCUUUGGCCUGGCUGAGUUUGAUACUGUGGGGAUUCAGUUUAGGCGCUGGCCCGAGGAUAUCCCAGCGGUGGUACUUCGGAGACACCUGUCUGCAUCUGACUGAGCAGAACAAAUCGUCAGGUGCCUGGAGCAAAAAGGAAAAAAAAAAAAGAAAGGm6ACAUUGAGUUUUAACAGAAGGGAAAAGGAAAGAAGAAAAGAUUUUUGCAGAAUUUCUCAAAAAUCAGUUUGUGGAUUCCAGUAGUAUUUAUAUUGAGAGAAACAAAUUUUAGUCCUUCUAm6ACUGUGCUAAAACUUGGAUAUUUGUGAAAACUCCUUACCACCAUACAAGCAUCAGAAGAGCUCUCUUGUUGUUAGCACUUAUUGUUUGCAAGAm6ACAGAAUACAYCCUUUUAUCCUUUUAUGAAAAAUGACAAGUGAAGGCAAAAGGGGAAGGUUAUUUGAUCUGGAAGAUGAGUGUUCUGAUGUGGUGGCUUUUGCAAAAAUCUYUAUUGGUGUUGAAAACUGGAAAAAAUAm6ACUCAYCCAGAAUUCAUAUUGUCUUGACAAGAm6ACUAUGGUUCUCUGUUUUUAGAUAUUGUGGAAAAUGUUUUUGGGCAUUUUUCUCUGAUUUUAUUUCUUCUCCCCCACCCCUUUUUCUAAAAAACAAACAAAAAAAAAAACACACAAAACAAAAACAGAACAAAAGAAGAGAGAAGGAAAUUUUAUCAAUUAAAAAUGCUGUGUGAUAAAAUCCCAGCCCAGAUUGCUCAGCUGUUUGUACCUGACUUGCCGCCUGCAUAGGAGCCAGUUCUGUUCCUUCUGACUAGCCCCUCUUCCYCCAGGGGAGAACUUCCAAAUGUUAAUUUUUUUUUUUUUGAAAAUAUAAAUAAUUACUAUUUUGUACUGUGUGGUAUCUCUGGUCUUUUGUUUCACUCACCUGCCUUGUCUCUUGGGUCUGAGUCCCUUGCUUAAGGGAUUUUGAAGUCCUAGUUUUCAGCUUGCAGAGAUUAUGUCUGAAAUGCCUAAUGAGUCGCAGGGAUUUGUUGAGACUCCGUAAUCUCAAGUUCUCUUUGUGAGCUAUCAGCAUCUGCCAGUCUCUUGUCCUCCCUGAGUAUCUCACAGUCCAUAUCCUGAUGAGGGAUCAGGCCCCUACCUCUGCCAAGGCAAGUAAUGGUAGUGGGCUUUUAAACUGCCCCCCGUAUGUUUUAAGACCUAAUCCCCACCUCCCUUCUUCUAACUAAAUAUAAAAAGAUCCAGGGGACAUAAAUGUGGAGAUUAAAUAAAGGGAAAUUAUUGUCUCUAA
Sequence (MODOMICS CODE ENCODING)	GUGCUGACGCCAUGACGCCCCGGCUGGUGUGUGUCGGUGUGUAUGUGUGUGUGUGAGUGUGCGCGCUCCGAGUGUGUGUGUAUUUGUGUAUCGGCGGUCCCGCAGGUCCCGGAUGUUGCGGACAGUAUGAGGCAAGCGCAGGGGGACGGGGACCAGCAGCUGUCGCCGCCGCUCUCAGAUCGAGUCUUGCUCUGUCACCCAGGCUGGAGUGCAGUGGCGCGAUCUCAGCUCACUGCCACCUUUGCCUCCUGGGUUCAAGCGAUUCUUCUGCCUCAGCCUCCCGAGUAGCUGGGAUUACAGGGUGAAGAGGGAACAGAAAUCUUUGCCCCCUGACUUUGGAAAUCUCGUUUAACCUUCAAACUGGCGAUGUCAAGGGUUCCAAGUCC2000000009UCCACC2000000009UCCGGCAGAAAUGUCGAGUGGCCCCGUAGCUGAGAGUUGGUGCUACACACAGAUCAAGGUAGUGAAAUUCUCCUACAUGUGGACCAUCAAUAACU2000000009UUAGCUUUUGCCGGGAGGAAAUGGGUGAAGUCAUUAAAAGUUCUACAUUUUCAUCAGGAGCAAAUGAUAAACUGAAAUGGUGUUUGCGAGUAAACCCCAAAGGGUUAGAUGAAGAAAGCAAAGAUUACCUGUCACU2000000009UUACCUGUUACUGGUCAGCUGUCCAAAGAGUGAAGUUCGGGCAAAAUUCAAAUUCUCCA2000000009UCCUGAAUGCCAAGGGAGAAGAAACCAAAGCUAUGGAGAGUCAACGGGCAUAUAGGUUUGUGCAAGGCAAAGACUGGGGAUUCAAGAAAUUCA2000000009UCCGUAGAGAUUUUCUUUUGGAUGAGGCCAACGGGCUUCUCCCUGAUG2000000006ACAAGCUUACCCUCUUCUGCGAGGUGAGUGUUGUGCAAGAUUCUGUCAACAUUUCUGGCCAGAAUACCAUGAACAUGGUAAAGGUUCCUGAGUGCCGGCUGGCAGAUGAGUUAGGAGGACUGUGGGAGAAUUCCCGGUUCACAGACUGCUGCUUGUGUGUUGCCGGCCAGGAAUUCCAGGCUCACAAGGCUAUCUUAGCAGCUCGUUCUCCGGUUUUUAGUGCCAUGUUUGAACAUGAAAUGGAGGAGAGCAAAAAGAAUCGAGUUGAAAUCAAUGAUGUGGAGCCUGAAGUUUUUAAGGAAAUGAUGUGCUUCAUUUACACGGGGAAGGCUCCAAACCUCGACAAAAUGGCUGAUGAU2000000009UUGCUGGCAGCUGCUGACAAGUAUGCCCUGGAGCGCUUAAAGGUCAUGUGUGAGGAUGCCCUCUGCAGUAACCUGUCCGUGGAGAACGCUGCAGAAAUUCUCA2000000009UCCUGGCCGACCUCCACAGUGCAGAUCAGUUGAAAACUCAGGCAGUGGAUUUCAUCAACUAUCAUGCUUCGGAUGUCUUGGAGACCUCUGGGUGGAAGUCAAUGGUGGUGUCACA2000000009UCCCCACUUGGUGGCUGAGGCAUACCGCUCUCUGGCUUCAGCACAGUGCCCUUUUCUGGGACCCCCACGCAAACGCCUGAAGCAAUCCUAAGAUCCUGCUUGUUGUAAG2000000006ACUCCGUUUAAUUUCCAGAAGCAGCAGCCACUGUUGCUGCCACUGACCACCAGGUAGACAGCGCAAUCUGUGGAGCUUUUACUCUGUUGUGAGGGGAAGAG2000000006ACUGCAUUGUGGCCCCAG2000000006ACUUUUAAAACAGCACUAAAUA2000000006ACUUGGGGGAAACGGGGGGAGGGAAAAUGAAAUGAAAACCCUGUUGCUGCGUCACUGUGUUCCCUUUGGCCUGGCUGAGUUUGAUACUGUGGGGAUUCAGUUUAGGCGCUGGCCCGAGGAUAUCCCAGCGGUGGUACUUCGGAGACACCUGUCUGCAUCUGACUGAGCAGAACAAAUCGUCAGGUGCCUGGAGCAAAAAGGAAAAAAAAAAAAGAAAGG2000000006ACAUUGAGUUUUAACAGAAGGGAAAAGGAAAGAAGAAAAGAUUUUUGCAGAAUUUCUCAAAAAUCAGUUUGUGGAUUCCAGUAGUAUUUAUAUUGAGAGAAACAAAUUUUAGUCCUUCUA2000000006ACUGUGCUAAAACUUGGAUAUUUGUGAAAACUCCUUACCACCAUACAAGCAUCAGAAGAGCUCUCUUGUUGUUAGCACUUAUUGUUUGCAAGA2000000006ACAGAAUACA2000000009UCCUUUUAUCCUUUUAUGAAAAAUGACAAGUGAAGGCAAAAGGGGAAGGUUAUUUGAUCUGGAAGAUGAGUGUUCUGAUGUGGUGGCUUUUGCAAAAAUCU2000000009UUAUUGGUGUUGAAAACUGGAAAAAAUA2000000006ACUCA2000000009UCCAGAAUUCAUAUUGUCUUGACAAGA2000000006ACUAUGGUUCUCUGUUUUUAGAUAUUGUGGAAAAUGUUUUUGGGCAUUUUUCUCUGAUUUUAUUUCUUCUCCCCCACCCCUUUUUCUAAAAAACAAACAAAAAAAAAAACACACAAAACAAAAACAGAACAAAAGAAGAGAGAAGGAAAUUUUAUCAAUUAAAAAUGCUGUGUGAUAAAAUCCCAGCCCAGAUUGCUCAGCUGUUUGUACCUGACUUGCCGCCUGCAUAGGAGCCAGUUCUGUUCCUUCUGACUAGCCCCUCUUCC2000000009UCCAGGGGAGAACUUCCAAAUGUUAAUUUUUUUUUUUUUGAAAAUAUAAAUAAUUACUAUUUUGUACUGUGUGGUAUCUCUGGUCUUUUGUUUCACUCACCUGCCUUGUCUCUUGGGUCUGAGUCCCUUGCUUAAGGGAUUUUGAAGUCCUAGUUUUCAGCUUGCAGAGAUUAUGUCUGAAAUGCCUAAUGAGUCGCAGGGAUUUGUUGAGACUCCGUAAUCUCAAGUUCUCUUUGUGAGCUAUCAGCAUCUGCCAGUCUCUUGUCCUCCCUGAGUAUCUCACAGUCCAUAUCCUGAUGAGGGAUCAGGCCCCUACCUCUGCCAAGGCAAGUAAUGGUAGUGGGCUUUUAAACUGCCCCCCGUAUGUUUUAAGACCUAAUCCCCACCUCCCUUCUUCUAACUAAAUAUAAAAAGAUCCAGGGGACAUAAAUGUGGAGAUUAAAUAAAGGGAAAUUAUUGUCUCUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	387	393	488	624	683	776	824	1183	1286	1401	1510	1611	1629	1651	1870	1990	2083	2093	2194	2222	2227	2254	2520
Modification Positions	Y	Y	Y	Y	Y	Y	m6A	Y	Y	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	Y	m6A	Y	m6A	Y
Genomic Coordinates	17:49622790:-	17:49622784:-	17:49622024:-	17:49619328:-	17:49619269:-	17:49619051:-	17:49619003:-	17:49607270:-	17:49601925:-	17:49600468:-	17:49600359:-	17:49600258:-	17:49600240:-	17:49600218:-	17:49599999:-	17:49599879:-	17:49599786:-	17:49599776:-	17:49599675:-	17:49599647:-	17:49599642:-	17:49599615:-	17:49599349:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
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