General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000421374
Gene ID:	ENSG00000100014
Gene Name:	SPECC1L
Sequence (UNICHARACTER ENCODING)	AAGGGCGGGGCCCGCGAGGGAGGCCGGGCGGCCCGGCAAGCGGCGCUGCGGGGUAGGCUGCUUUCCUGAGGCCGGACUCAACGGGUCUCGGCUGAGCCACCGGGUGAGCUCACCGCCCAGCCCAAACCAGGAGAUUGCGAGGGAGCGAUGCGGUGCAGCGCGAUUUGCUUGUAAAUGCAUCACGAAGAGGCAGCCCAGAAUGAAGAAAGCAAGCAGGAGUGUUGGCUCAGUGCCUAAAGUGUCUGCAAUAAGUAAAACGCAAACAGCAGAAAAAAUUAAACCUGAAAACAGCUCUUCAGCAUCUACGGGAGGCAAACUUGUAAAACCUGGAACAGCAGCAUCAUUGUCAAAGACCAAGAGCAGUGAUGACCUUUUAGCUGGAAUGGCCGGAGGGGUAACGGUGACUAAUGGUGUUAAAGGAAAGAAAAGCACCUGCCCAUCUGCAGCACCUUCAGCAUCUGCCCCUGCCAUGACCACCGUGGAGAACAAAUCCAAGAUUAGCACAGGCACAGCUUCUUCAACCAAGCGGAGCACUUCUACAGGUAAUAAAGAAUCCAGUUCUACUAGAGAAAGAUUACGUGAACGUACCCGAUUAAACCAGAGCAAAAAACUACCUUCUGCAGGUCAGGGAGCUAAUGACAUGGCAUUGGCCAAACGUUCCCGCAGUCGAЖCUGCUACAGAAUGUGACGUUCGUAUGAGCAAGUCUAAGUCAGACAAUCAGAUCAGUGACAGAGCUGCUUUGGAGGCCAAAGUGAAGGAUCUUCUCACGCUGGCAAAAACCAAAGACGUAGAAAUUUUACAUUUGAGAAAUGAЖCUGCGAGACAUGCGUGCCCAGCUGGGCAUUAAUGAGGAUCAUUCUGAGGGUGAUGAAAAAUCUGAGAAGGAAACUAUUAUGGCUCACCAGCCGACUGAUGUGGAGUCCACUUUAUUGCAGUUGCAGGAACAGAAUACUGCCAUCCGUGAAGAACUCAACCAGCUGAAAAAUGAAAACAGAAUGUUAAAGGЖCAGGUUGAAUGCAUUGGGCUUUUCCCUAGAGCAGAGGUUAGACAAUUCUGAAAAЖCUGUUUGGCUAUCAGUCCCUGAGCCCAGAAAUCACCCCUGGUAACCAGAGCGAUGGAGGAGGAACUCUGACUUCUUCAGUGGAAGGCUCUGCCCCUGGCUCAGUGGAGGAUCUCUUGAGUCAGGAUGAAAAUACACUAAUGGЖCCAUCAGCACAGUAACUCCAUGGЖCAAUUUAGACAGUGAGUGCAGUGAGGUCUACCAGCCCCUCACAUCGAGCGAUGAUGCGCUGGAUGCACCAUCCUCCUCAGAGUCGGAAGGCAUCCCCAGCAUAGAGCGCUCCCGGAAGGGGAGCAGCGGGAAUGCCAGUGAAGUGUCCGUGGCUUGCCUGACUGAACGGAUACACCAGAUGGAAGAGAACCAACACAGUACAAGUGAGGAACUCCAGGCAACCCUGCAAGAGCUAGCUGAUUUACAGCAGAUUACCCAGGAACUGAAUAGUGAAAACGAAAGGCUUGGAGAAGAGAAGGUUAUUCUGAUGGAGUCUUUAUGUCAGCAGAGCGAUAAGUUGGAЖCACUUUAGUCGACAGAUUGAAUACUUCCGCUCUCUUCUAGAUGAGCAUCACAUUUCUUAUGUCAUAGAUGAAGAUGUAAAAAGUGGGCGCUAUAUGGAAUUAGAGCAACGUUACAUGGЖCCUCGCUGAGAAUGCCCGUUUUGAACGGGAGCAGCUUCUUGGUGUCCAGCAGCAUUUAAGCAAUACUUUGAAAAUGGCAGAACAAGACAAUAAGGAAGCUCAAGAAAUGAUAGGGGCACUCAAAGAACGCAGUCACCAUAUGGAGCGAAUUAUUGAGUCUGAGCAGAAAGGAAAAGCAGCCUUGGCAGCCACGUUAGAGGAAUACAAAGCCACAGUGGCCAGUGACCAGAUAGAGAUGAAUCGCCUGAAGGCUCAGCUGGAGAAUGAAAAGCAGAAAGUGGCAGAGCUGUAUUCUAUCCAUAACUCUGGAGACAAAUCUGAUAUUCAGGACCUCCUGGAGAGUGUCAGGCUGGACAAAGAAAAAGCAGAGЖCUUUGGCUAGUAGCUUGCAGGAAGAUCUGGCUCAUACCCGAAAUGAUGCCAAUCGAUUACAGGAUGCCAUUGCUAAGGUAGAGGAUGAAUACCGAGCCUUCCAAGAAGAAGCUAAGAAACAAAUUGAAGAUUUGAAUAUGACGUUAGAAAAAUUAAGAUCAGACCUGGAUGAAAAAGAAACAGAAAGGAGUGACAUGAAAGAAACCAUCUUUGAACUUGAAGAUGAAGUAGAACAACAUCGUGCUGUGAAACUUCAUGACAACCUCAUUAUUUCUGAUCUAGAGAAUACAGUUAAAAAACUCCAGGACCAAAAGCACGACAUGGAAAGAGAAAUAAAGACACUCCACAGAAGACUUCGGGAAGAAUCUGCGGAAUGGCGGCAGUUUCAGGCUGAUCUCCAGACUGCAGUAGUCAUUGCAAAUGACAUUAAAUCUGAAGCCCAAGAGGAGAUUGGUGAUCUAAAGCGCCGGUUACAUGAGGCUCAAGAAAAAAAUGAGAAACUCAC
Sequence (SHORT NAMES ENCODING)	AAGGGCGGGGCCCGCGAGGGAGGCCGGGCGGCCCGGCAAGCGGCGCUGCGGGGUAGGCUGCUUUCCUGAGGCCGGACUCAACGGGUCUCGGCUGAGCCACCGGGUGAGCUCACCGCCCAGCCCAAACCAGGAGAUUGCGAGGGAGCGAUGCGGUGCAGCGCGAUUUGCUUGUAAAUGCAUCACGAAGAGGCAGCCCAGAAUGAAGAAAGCAAGCAGGAGUGUUGGCUCAGUGCCUAAAGUGUCUGCAAUAAGUAAAACGCAAACAGCAGAAAAAAUUAAACCUGAAAACAGCUCUUCAGCAUCUACGGGAGGCAAACUUGUAAAACCUGGAACAGCAGCAUCAUUGUCAAAGACCAAGAGCAGUGAUGACCUUUUAGCUGGAAUGGCCGGAGGGGUAACGGUGACUAAUGGUGUUAAAGGAAAGAAAAGCACCUGCCCAUCUGCAGCACCUUCAGCAUCUGCCCCUGCCAUGACCACCGUGGAGAACAAAUCCAAGAUUAGCACAGGCACAGCUUCUUCAACCAAGCGGAGCACUUCUACAGGUAAUAAAGAAUCCAGUUCUACUAGAGAAAGAUUACGUGAACGUACCCGAUUAAACCAGAGCAAAAAACUACCUUCUGCAGGUCAGGGAGCUAAUGACAUGGCAUUGGCCAAACGUUCCCGCAGUCGAm6ACUGCUACAGAAUGUGACGUUCGUAUGAGCAAGUCUAAGUCAGACAAUCAGAUCAGUGACAGAGCUGCUUUGGAGGCCAAAGUGAAGGAUCUUCUCACGCUGGCAAAAACCAAAGACGUAGAAAUUUUACAUUUGAGAAAUGAm6ACUGCGAGACAUGCGUGCCCAGCUGGGCAUUAAUGAGGAUCAUUCUGAGGGUGAUGAAAAAUCUGAGAAGGAAACUAUUAUGGCUCACCAGCCGACUGAUGUGGAGUCCACUUUAUUGCAGUUGCAGGAACAGAAUACUGCCAUCCGUGAAGAACUCAACCAGCUGAAAAAUGAAAACAGAAUGUUAAAGGm6ACAGGUUGAAUGCAUUGGGCUUUUCCCUAGAGCAGAGGUUAGACAAUUCUGAAAAm6ACUGUUUGGCUAUCAGUCCCUGAGCCCAGAAAUCACCCCUGGUAACCAGAGCGAUGGAGGAGGAACUCUGACUUCUUCAGUGGAAGGCUCUGCCCCUGGCUCAGUGGAGGAUCUCUUGAGUCAGGAUGAAAAUACACUAAUGGm6ACCAUCAGCACAGUAACUCCAUGGm6ACAAUUUAGACAGUGAGUGCAGUGAGGUCUACCAGCCCCUCACAUCGAGCGAUGAUGCGCUGGAUGCACCAUCCUCCUCAGAGUCGGAAGGCAUCCCCAGCAUAGAGCGCUCCCGGAAGGGGAGCAGCGGGAAUGCCAGUGAAGUGUCCGUGGCUUGCCUGACUGAACGGAUACACCAGAUGGAAGAGAACCAACACAGUACAAGUGAGGAACUCCAGGCAACCCUGCAAGAGCUAGCUGAUUUACAGCAGAUUACCCAGGAACUGAAUAGUGAAAACGAAAGGCUUGGAGAAGAGAAGGUUAUUCUGAUGGAGUCUUUAUGUCAGCAGAGCGAUAAGUUGGAm6ACACUUUAGUCGACAGAUUGAAUACUUCCGCUCUCUUCUAGAUGAGCAUCACAUUUCUUAUGUCAUAGAUGAAGAUGUAAAAAGUGGGCGCUAUAUGGAAUUAGAGCAACGUUACAUGGm6ACCUCGCUGAGAAUGCCCGUUUUGAACGGGAGCAGCUUCUUGGUGUCCAGCAGCAUUUAAGCAAUACUUUGAAAAUGGCAGAACAAGACAAUAAGGAAGCUCAAGAAAUGAUAGGGGCACUCAAAGAACGCAGUCACCAUAUGGAGCGAAUUAUUGAGUCUGAGCAGAAAGGAAAAGCAGCCUUGGCAGCCACGUUAGAGGAAUACAAAGCCACAGUGGCCAGUGACCAGAUAGAGAUGAAUCGCCUGAAGGCUCAGCUGGAGAAUGAAAAGCAGAAAGUGGCAGAGCUGUAUUCUAUCCAUAACUCUGGAGACAAAUCUGAUAUUCAGGACCUCCUGGAGAGUGUCAGGCUGGACAAAGAAAAAGCAGAGm6ACUUUGGCUAGUAGCUUGCAGGAAGAUCUGGCUCAUACCCGAAAUGAUGCCAAUCGAUUACAGGAUGCCAUUGCUAAGGUAGAGGAUGAAUACCGAGCCUUCCAAGAAGAAGCUAAGAAACAAAUUGAAGAUUUGAAUAUGACGUUAGAAAAAUUAAGAUCAGACCUGGAUGAAAAAGAAACAGAAAGGAGUGACAUGAAAGAAACCAUCUUUGAACUUGAAGAUGAAGUAGAACAACAUCGUGCUGUGAAACUUCAUGACAACCUCAUUAUUUCUGAUCUAGAGAAUACAGUUAAAAAACUCCAGGACCAAAAGCACGACAUGGAAAGAGAAAUAAAGACACUCCACAGAAGACUUCGGGAAGAAUCUGCGGAAUGGCGGCAGUUUCAGGCUGAUCUCCAGACUGCAGUAGUCAUUGCAAAUGACAUUAAAUCUGAAGCCCAAGAGGAGAUUGGUGAUCUAAAGCGCCGGUUACAUGAGGCUCAAGAAAAAAAUGAGAAACUCAC
Sequence (MODOMICS CODE ENCODING)	AAGGGCGGGGCCCGCGAGGGAGGCCGGGCGGCCCGGCAAGCGGCGCUGCGGGGUAGGCUGCUUUCCUGAGGCCGGACUCAACGGGUCUCGGCUGAGCCACCGGGUGAGCUCACCGCCCAGCCCAAACCAGGAGAUUGCGAGGGAGCGAUGCGGUGCAGCGCGAUUUGCUUGUAAAUGCAUCACGAAGAGGCAGCCCAGAAUGAAGAAAGCAAGCAGGAGUGUUGGCUCAGUGCCUAAAGUGUCUGCAAUAAGUAAAACGCAAACAGCAGAAAAAAUUAAACCUGAAAACAGCUCUUCAGCAUCUACGGGAGGCAAACUUGUAAAACCUGGAACAGCAGCAUCAUUGUCAAAGACCAAGAGCAGUGAUGACCUUUUAGCUGGAAUGGCCGGAGGGGUAACGGUGACUAAUGGUGUUAAAGGAAAGAAAAGCACCUGCCCAUCUGCAGCACCUUCAGCAUCUGCCCCUGCCAUGACCACCGUGGAGAACAAAUCCAAGAUUAGCACAGGCACAGCUUCUUCAACCAAGCGGAGCACUUCUACAGGUAAUAAAGAAUCCAGUUCUACUAGAGAAAGAUUACGUGAACGUACCCGAUUAAACCAGAGCAAAAAACUACCUUCUGCAGGUCAGGGAGCUAAUGACAUGGCAUUGGCCAAACGUUCCCGCAGUCGA2000000006ACUGCUACAGAAUGUGACGUUCGUAUGAGCAAGUCUAAGUCAGACAAUCAGAUCAGUGACAGAGCUGCUUUGGAGGCCAAAGUGAAGGAUCUUCUCACGCUGGCAAAAACCAAAGACGUAGAAAUUUUACAUUUGAGAAAUGA2000000006ACUGCGAGACAUGCGUGCCCAGCUGGGCAUUAAUGAGGAUCAUUCUGAGGGUGAUGAAAAAUCUGAGAAGGAAACUAUUAUGGCUCACCAGCCGACUGAUGUGGAGUCCACUUUAUUGCAGUUGCAGGAACAGAAUACUGCCAUCCGUGAAGAACUCAACCAGCUGAAAAAUGAAAACAGAAUGUUAAAGG2000000006ACAGGUUGAAUGCAUUGGGCUUUUCCCUAGAGCAGAGGUUAGACAAUUCUGAAAA2000000006ACUGUUUGGCUAUCAGUCCCUGAGCCCAGAAAUCACCCCUGGUAACCAGAGCGAUGGAGGAGGAACUCUGACUUCUUCAGUGGAAGGCUCUGCCCCUGGCUCAGUGGAGGAUCUCUUGAGUCAGGAUGAAAAUACACUAAUGG2000000006ACCAUCAGCACAGUAACUCCAUGG2000000006ACAAUUUAGACAGUGAGUGCAGUGAGGUCUACCAGCCCCUCACAUCGAGCGAUGAUGCGCUGGAUGCACCAUCCUCCUCAGAGUCGGAAGGCAUCCCCAGCAUAGAGCGCUCCCGGAAGGGGAGCAGCGGGAAUGCCAGUGAAGUGUCCGUGGCUUGCCUGACUGAACGGAUACACCAGAUGGAAGAGAACCAACACAGUACAAGUGAGGAACUCCAGGCAACCCUGCAAGAGCUAGCUGAUUUACAGCAGAUUACCCAGGAACUGAAUAGUGAAAACGAAAGGCUUGGAGAAGAGAAGGUUAUUCUGAUGGAGUCUUUAUGUCAGCAGAGCGAUAAGUUGGA2000000006ACACUUUAGUCGACAGAUUGAAUACUUCCGCUCUCUUCUAGAUGAGCAUCACAUUUCUUAUGUCAUAGAUGAAGAUGUAAAAAGUGGGCGCUAUAUGGAAUUAGAGCAACGUUACAUGG2000000006ACCUCGCUGAGAAUGCCCGUUUUGAACGGGAGCAGCUUCUUGGUGUCCAGCAGCAUUUAAGCAAUACUUUGAAAAUGGCAGAACAAGACAAUAAGGAAGCUCAAGAAAUGAUAGGGGCACUCAAAGAACGCAGUCACCAUAUGGAGCGAAUUAUUGAGUCUGAGCAGAAAGGAAAAGCAGCCUUGGCAGCCACGUUAGAGGAAUACAAAGCCACAGUGGCCAGUGACCAGAUAGAGAUGAAUCGCCUGAAGGCUCAGCUGGAGAAUGAAAAGCAGAAAGUGGCAGAGCUGUAUUCUAUCCAUAACUCUGGAGACAAAUCUGAUAUUCAGGACCUCCUGGAGAGUGUCAGGCUGGACAAAGAAAAAGCAGAG2000000006ACUUUGGCUAGUAGCUUGCAGGAAGAUCUGGCUCAUACCCGAAAUGAUGCCAAUCGAUUACAGGAUGCCAUUGCUAAGGUAGAGGAUGAAUACCGAGCCUUCCAAGAAGAAGCUAAGAAACAAAUUGAAGAUUUGAAUAUGACGUUAGAAAAAUUAAGAUCAGACCUGGAUGAAAAAGAAACAGAAAGGAGUGACAUGAAAGAAACCAUCUUUGAACUUGAAGAUGAAGUAGAACAACAUCGUGCUGUGAAACUUCAUGACAACCUCAUUAUUUCUGAUCUAGAGAAUACAGUUAAAAAACUCCAGGACCAAAAGCACGACAUGGAAAGAGAAAUAAAGACACUCCACAGAAGACUUCGGGAAGAAUCUGCGGAAUGGCGGCAGUUUCAGGCUGAUCUCCAGACUGCAGUAGUCAUUGCAAAUGACAUUAAAUCUGAAGCCCAAGAGGAGAUUGGUGAUCUAAAGCGCCGGUUACAUGAGGCUCAAGAAAAAAAUGAGAAACUCAC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	671	814	1005	1060	1203	1227	1570	1689	2060
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	22:24321452:+	22:24321595:+	22:24321786:+	22:24321841:+	22:24321984:+	22:24322008:+	22:24322351:+	22:24322470:+	22:24322841:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 4HMi5ykupT9V 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw BkoLW2CBToyL Lny8GcCeVGc9	3TeAZFYFxgvp 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 Lny8GcCeVGc9 UKen6WEino9G	6AyXsheySjfx 6UuHp6YApVKv msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BkoLW2CBToyL nfCHyrYzE6fB BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL