General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000699256
Gene ID:	ENSG00000100099
Gene Name:	HPS4
Sequence (UNICHARACTER ENCODING)	GGCGGCGCGUGACCUAAGGCCUCUCUGCCGCGCGCGCAGAGCCAAGGCACUGAUGUUUGAACUGGAAACUUCAAAACGUUUAAUAAGAGUCUUCAGGAUGGGUUUGAACUAGACAAGCUAGAAAUUUCUUUAGAACACCAGCUCUAGCAUGCAUCUCCCACUUUUGGCUUUCCUGGAGAGGAGCUUGAAGAGGUGGUUCUGCAGACAGCCACAGUGAUACUUAGGAAACCAGAGGAAUGGЖUUUGЖCUUUUCUGCUAGGAUUCUCUGUUAUAGUUUCUCCCUGAGUUGUAAGAGGCAUGGAAAUAUACAUGAAACUGAAGAACCUGCAAGGAAGGGAAGUGGAЖCUUUCCAUGCUGAGUGAAAACUAACCAAGUGGCAGUUGUGЖCUGAAAACACUGAAACCUACCACGUCCAGAUUCACUGGAUUGGGGGAUAGAGGAACGGUCACAGCUAGGGAGAAAGAAGUGAUACCGGAAAAGAAAACCUAAAUGAAGAGAAUGAGGAUGACUGCACAGUAGAUGGCCACCUCUACCUCCACAGAGGCAAAGUCAGCCUCGUGGUGGAAUUAUUUUUUUCUUUAUGAUGGUUCCAAGGUAAAGGAAGAAGGCGAUCCAACAAGAGCUGGCAUUUGUUACUUUUAUCCUUCCCAGACCCUGCUAGACCAACAGGAGUUGCUUUGUGGACAGAUUGCUGGAGUUGUCCGCUGUGUUUCUGACAUUUCUGACUCUCCUCCUACUCUUGUUCGUCUGAGAAAACUGAAGUUUGCCAUAAAAGUUGAUGGAGAUUACCUUUGGGUAAGUUGAAUGGCAGAAUCAGUGCUGAAGUGUUGCAAUGAUAAGUUUAGGAAGUUAUGUUGUUUCUGAGUCUUGAAUUUAGAAUUAUCUGCCCCCACCAACCUCAUCCAUGUACUGUGUUUAGUAAUCACCCUCGCUUCCUGUGGUACUCUCUGCAGGUUUUCAUCAUCAAGUGCUUUCCAAAACAUUUCUAACAUAUUCUGCAUUGCACACAGCUGGUUUCUCCUUUCCUUUCAAAGACUUAGGCCAACUUGUGGAAAUUCUGUUUACUCUGUGUUGUAAAUUGAGUUUUUAUCAUCAUCUUUUCUUCUCCAUGCUCUCUACACUUACUGGGUAAGUGACCCAGAAAAAAAUGAUAGAUAUAUGUUAGGUUU
Sequence (SHORT NAMES ENCODING)	GGCGGCGCGUGACCUAAGGCCUCUCUGCCGCGCGCGCAGAGCCAAGGCACUGAUGUUUGAACUGGAAACUUCAAAACGUUUAAUAAGAGUCUUCAGGAUGGGUUUGAACUAGACAAGCUAGAAAUUUCUUUAGAACACCAGCUCUAGCAUGCAUCUCCCACUUUUGGCUUUCCUGGAGAGGAGCUUGAAGAGGUGGUUCUGCAGACAGCCACAGUGAUACUUAGGAAACCAGAGGAAUGGm6AUUUGm6ACUUUUCUGCUAGGAUUCUCUGUUAUAGUUUCUCCCUGAGUUGUAAGAGGCAUGGAAAUAUACAUGAAACUGAAGAACCUGCAAGGAAGGGAAGUGGAm6ACUUUCCAUGCUGAGUGAAAACUAACCAAGUGGCAGUUGUGm6ACUGAAAACACUGAAACCUACCACGUCCAGAUUCACUGGAUUGGGGGAUAGAGGAACGGUCACAGCUAGGGAGAAAGAAGUGAUACCGGAAAAGAAAACCUAAAUGAAGAGAAUGAGGAUGACUGCACAGUAGAUGGCCACCUCUACCUCCACAGAGGCAAAGUCAGCCUCGUGGUGGAAUUAUUUUUUUCUUUAUGAUGGUUCCAAGGUAAAGGAAGAAGGCGAUCCAACAAGAGCUGGCAUUUGUUACUUUUAUCCUUCCCAGACCCUGCUAGACCAACAGGAGUUGCUUUGUGGACAGAUUGCUGGAGUUGUCCGCUGUGUUUCUGACAUUUCUGACUCUCCUCCUACUCUUGUUCGUCUGAGAAAACUGAAGUUUGCCAUAAAAGUUGAUGGAGAUUACCUUUGGGUAAGUUGAAUGGCAGAAUCAGUGCUGAAGUGUUGCAAUGAUAAGUUUAGGAAGUUAUGUUGUUUCUGAGUCUUGAAUUUAGAAUUAUCUGCCCCCACCAACCUCAUCCAUGUACUGUGUUUAGUAAUCACCCUCGCUUCCUGUGGUACUCUCUGCAGGUUUUCAUCAUCAAGUGCUUUCCAAAACAUUUCUAACAUAUUCUGCAUUGCACACAGCUGGUUUCUCCUUUCCUUUCAAAGACUUAGGCCAACUUGUGGAAAUUCUGUUUACUCUGUGUUGUAAAUUGAGUUUUUAUCAUCAUCUUUUCUUCUCCAUGCUCUCUACACUUACUGGGUAAGUGACCCAGAAAAAAAUGAUAGAUAUAUGUUAGGUUU
Sequence (MODOMICS CODE ENCODING)	GGCGGCGCGUGACCUAAGGCCUCUCUGCCGCGCGCGCAGAGCCAAGGCACUGAUGUUUGAACUGGAAACUUCAAAACGUUUAAUAAGAGUCUUCAGGAUGGGUUUGAACUAGACAAGCUAGAAAUUUCUUUAGAACACCAGCUCUAGCAUGCAUCUCCCACUUUUGGCUUUCCUGGAGAGGAGCUUGAAGAGGUGGUUCUGCAGACAGCCACAGUGAUACUUAGGAAACCAGAGGAAUGG2000000006AUUUG2000000006ACUUUUCUGCUAGGAUUCUCUGUUAUAGUUUCUCCCUGAGUUGUAAGAGGCAUGGAAAUAUACAUGAAACUGAAGAACCUGCAAGGAAGGGAAGUGGA2000000006ACUUUCCAUGCUGAGUGAAAACUAACCAAGUGGCAGUUGUG2000000006ACUGAAAACACUGAAACCUACCACGUCCAGAUUCACUGGAUUGGGGGAUAGAGGAACGGUCACAGCUAGGGAGAAAGAAGUGAUACCGGAAAAGAAAACCUAAAUGAAGAGAAUGAGGAUGACUGCACAGUAGAUGGCCACCUCUACCUCCACAGAGGCAAAGUCAGCCUCGUGGUGGAAUUAUUUUUUUCUUUAUGAUGGUUCCAAGGUAAAGGAAGAAGGCGAUCCAACAAGAGCUGGCAUUUGUUACUUUUAUCCUUCCCAGACCCUGCUAGACCAACAGGAGUUGCUUUGUGGACAGAUUGCUGGAGUUGUCCGCUGUGUUUCUGACAUUUCUGACUCUCCUCCUACUCUUGUUCGUCUGAGAAAACUGAAGUUUGCCAUAAAAGUUGAUGGAGAUUACCUUUGGGUAAGUUGAAUGGCAGAAUCAGUGCUGAAGUGUUGCAAUGAUAAGUUUAGGAAGUUAUGUUGUUUCUGAGUCUUGAAUUUAGAAUUAUCUGCCCCCACCAACCUCAUCCAUGUACUGUGUUUAGUAAUCACCCUCGCUUCCUGUGGUACUCUCUGCAGGUUUUCAUCAUCAAGUGCUUUCCAAAACAUUUCUAACAUAUUCUGCAUUGCACACAGCUGGUUUCUCCUUUCCUUUCAAAGACUUAGGCCAACUUGUGGAAAUUCUGUUUACUCUGUGUUGUAAAUUGAGUUUUUAUCAUCAUCUUUUCUUCUCCAUGCUCUCUACACUUACUGGGUAAGUGACCCAGAAAAAAAUGAUAGAUAUAUGUUAGGUUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	241	246	344	385
Modification Positions	m6A	m6A	m6A	m6A
Genomic Coordinates	22:26482039:-	22:26482034:-	22:26481936:-	22:26481895:-
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se Lny8GcCeVGc9 Yfn77uLS5tv8	Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Yfn77uLS5tv8