General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000396096
Gene ID:	ENSG00000093000
Gene Name:	NUP50
Sequence (UNICHARACTER ENCODING)	GGGGUGGGAUGACAGCGGCGACGCAGCCCCGGCUGUUUUUGAAGCGGGGCCCGGGCCCCACCGGGCUGCGGCGUCCGACUCGAGUGAGACUCUCCCCUGCGGCCCCGCCGGAGGUUCGAAAACAUGGCCAAAAGAAAUGCCGAGAAGGAACUGACAGAUAGGAAUUGGGAUCAAGAAGAUGAAGCUGAAGAGGGUAAAAGAAGGGCUAUAAACUAAAGCCGAAGAUAUUCAGCAGCUUUCUGACGUGGACAUCAGAAGUGUGGACAUGAGUGUGCUUUGAGCGCACUGUGGAAGAGCAGUGGUUGUCCAGCAAGGUCCUAGGUGCCUCCGUGGCCUUUCGUACAGUGGGCAAGUUGGGCAGGACUCAUCUUAAAAAUCAUGUGUGGGAACAUUCUCCAUGGCCAGUGAGGAAGUCUUGAAGAAUAGAGCCAUAAAGAAAGCAAAGCGCAGAAAUGUUGGAUUUGAAUCUGACACUGGAGGAGCCUPUAAAGGUUUUAAAGGUUUGGUGGUACCUUCUGGAGGAGGACGCUUUUCUGGAUUUGGUAGUGGCGCUGGAGGGAAGCCUUUGGAAGGACUGUCGAAUGGAAЖCAACAUAACCAGUGCCCCUCCCUUCGCCAGUGCAAAGGCAGCGGCAGAUCCCAAGGUAGCCUUUGGUUCUCUUGCUGCAAAUGGCCCUACCACCUUGGUUGAUAAAGUUUCAAAUCCCAAAACUAAUGGGGЖCAGUCAGCAGCCCUCCUCCUCUGGCCUUGCUUCCAGUAAAGCUUGUGUCGGAAAUGCCUAUCACAAGCAGUUGGCCGCCUUGAЖCUGCUCCGUGCGGGAUUGGAUAGUGAAGCACGUGAAUACAAACCCCCUCUGUGAUCUGACACCUAUCUPUAAAGЖCUAUGAGAAAUAUUUAGCAAACAUUGAACAGCAACACGGGAЖCAGUGGCAGGAAUUCUGAAAGUGAAUCUAACAAAGUGGCAGCUGAAACACAGUCUCCUUCCCUUUUUGGCUCAACAAAAUUACAGCAAGAGUCAACGUUUUUGUUUCAUGGCAACAAAACUGAAGAUACACCUGACAAGAAGAUGGAGGUGGCAUCUGAAAAGAAAACGGЖCCCAUCAUCACUAGGAGCGACAAGUGCCUCAUUUAAUUUCGGCAAGAAAGUUGAUAGCUCUGUUUUGGGCUCAUUAAGCUCUGUCCCCCUGЖCUGGЖUUUUCUUUCUCCCCUGGAAACUCCAGUUUAUUUGGCAAAGAUACUACCCAGAGUAAACCAGUCUCUUCACCAUUUCCCACUAAACCAUUGGAGGGCCAAGCAGAAGGUGACAGUGGUGAAUGCAAAGGUGGAGAUGAAGAAGAGAAUGAUGAGCCACCCAAAGUAGUAGUUACCGAAGUAAAAGAAGAAGAUGCUUUUUACUCCAAAAAGUGUAAACUGUUUUACAAGAAAGACAAUGAGUUUAAAGAGAAAGGCAUAGGUACUCUGCAUUUAAAACCUACAGCAAAUCAGAAGACACAGCUUUUGGUGCGGGCAGACACCAAUUUAGGCAACAUAUUGCUGAACGUUCUGAUUCCACCCAAUAUGCCAUGUACGCGAACAGGGAAGAAUAACGUUCUUAUCGUCUGUGUUCCAAAUCCACCAAUUGACGAGAAGAAUGCCACCAUGCCAGUCACCAUGUUGAUUCGGGUAAAAACCAGCGAGGAUGCAGACGAGUUGCACAAAAUUUUACUGGAGAAAAAGGAUGCCUGAACACGCAAAGUCGGCUGCAGAAUUAUUGCCAAGUUGCUGCUGCUUCCACCGCCCCUUAAAGUUAGUCAGUUUUUCUUCUCUUCUUUGЖCAUUCUAAGAЖCUUAUAGAUAЖCUUAAAЖCUUUUGUGAGGAAGAUUAAUGUGGCCAAUAAAACCUPUAAAUGUUAAGUGUCAAGAAA
Sequence (SHORT NAMES ENCODING)	GGGGUGGGAUGACAGCGGCGACGCAGCCCCGGCUGUUUUUGAAGCGGGGCCCGGGCCCCACCGGGCUGCGGCGUCCGACUCGAGUGAGACUCUCCCCUGCGGCCCCGCCGGAGGUUCGAAAACAUGGCCAAAAGAAAUGCCGAGAAGGAACUGACAGAUAGGAAUUGGGAUCAAGAAGAUGAAGCUGAAGAGGGUAAAAGAAGGGCUAUAAACUAAAGCCGAAGAUAUUCAGCAGCUUUCUGACGUGGACAUCAGAAGUGUGGACAUGAGUGUGCUUUGAGCGCACUGUGGAAGAGCAGUGGUUGUCCAGCAAGGUCCUAGGUGCCUCCGUGGCCUUUCGUACAGUGGGCAAGUUGGGCAGGACUCAUCUUAAAAAUCAUGUGUGGGAACAUUCUCCAUGGCCAGUGAGGAAGUCUUGAAGAAUAGAGCCAUAAAGAAAGCAAAGCGCAGAAAUGUUGGAUUUGAAUCUGACACUGGAGGAGCCUYUAAAGGUUUUAAAGGUUUGGUGGUACCUUCUGGAGGAGGACGCUUUUCUGGAUUUGGUAGUGGCGCUGGAGGGAAGCCUUUGGAAGGACUGUCGAAUGGAAm6ACAACAUAACCAGUGCCCCUCCCUUCGCCAGUGCAAAGGCAGCGGCAGAUCCCAAGGUAGCCUUUGGUUCUCUUGCUGCAAAUGGCCCUACCACCUUGGUUGAUAAAGUUUCAAAUCCCAAAACUAAUGGGGm6ACAGUCAGCAGCCCUCCUCCUCUGGCCUUGCUUCCAGUAAAGCUUGUGUCGGAAAUGCCUAUCACAAGCAGUUGGCCGCCUUGAm6ACUGCUCCGUGCGGGAUUGGAUAGUGAAGCACGUGAAUACAAACCCCCUCUGUGAUCUGACACCUAUCUYUAAAGm6ACUAUGAGAAAUAUUUAGCAAACAUUGAACAGCAACACGGGAm6ACAGUGGCAGGAAUUCUGAAAGUGAAUCUAACAAAGUGGCAGCUGAAACACAGUCUCCUUCCCUUUUUGGCUCAACAAAAUUACAGCAAGAGUCAACGUUUUUGUUUCAUGGCAACAAAACUGAAGAUACACCUGACAAGAAGAUGGAGGUGGCAUCUGAAAAGAAAACGGm6ACCCAUCAUCACUAGGAGCGACAAGUGCCUCAUUUAAUUUCGGCAAGAAAGUUGAUAGCUCUGUUUUGGGCUCAUUAAGCUCUGUCCCCCUGm6ACUGGm6AUUUUCUUUCUCCCCUGGAAACUCCAGUUUAUUUGGCAAAGAUACUACCCAGAGUAAACCAGUCUCUUCACCAUUUCCCACUAAACCAUUGGAGGGCCAAGCAGAAGGUGACAGUGGUGAAUGCAAAGGUGGAGAUGAAGAAGAGAAUGAUGAGCCACCCAAAGUAGUAGUUACCGAAGUAAAAGAAGAAGAUGCUUUUUACUCCAAAAAGUGUAAACUGUUUUACAAGAAAGACAAUGAGUUUAAAGAGAAAGGCAUAGGUACUCUGCAUUUAAAACCUACAGCAAAUCAGAAGACACAGCUUUUGGUGCGGGCAGACACCAAUUUAGGCAACAUAUUGCUGAACGUUCUGAUUCCACCCAAUAUGCCAUGUACGCGAACAGGGAAGAAUAACGUUCUUAUCGUCUGUGUUCCAAAUCCACCAAUUGACGAGAAGAAUGCCACCAUGCCAGUCACCAUGUUGAUUCGGGUAAAAACCAGCGAGGAUGCAGACGAGUUGCACAAAAUUUUACUGGAGAAAAAGGAUGCCUGAACACGCAAAGUCGGCUGCAGAAUUAUUGCCAAGUUGCUGCUGCUUCCACCGCCCCUUAAAGUUAGUCAGUUUUUCUUCUCUUCUUUGm6ACAUUCUAAGAm6ACUUAUAGAUAm6ACUUAAAm6ACUUUUGUGAGGAAGAUUAAUGUGGCCAAUAAAACCUYUAAAUGUUAAGUGUCAAGAAA
Sequence (MODOMICS CODE ENCODING)	GGGGUGGGAUGACAGCGGCGACGCAGCCCCGGCUGUUUUUGAAGCGGGGCCCGGGCCCCACCGGGCUGCGGCGUCCGACUCGAGUGAGACUCUCCCCUGCGGCCCCGCCGGAGGUUCGAAAACAUGGCCAAAAGAAAUGCCGAGAAGGAACUGACAGAUAGGAAUUGGGAUCAAGAAGAUGAAGCUGAAGAGGGUAAAAGAAGGGCUAUAAACUAAAGCCGAAGAUAUUCAGCAGCUUUCUGACGUGGACAUCAGAAGUGUGGACAUGAGUGUGCUUUGAGCGCACUGUGGAAGAGCAGUGGUUGUCCAGCAAGGUCCUAGGUGCCUCCGUGGCCUUUCGUACAGUGGGCAAGUUGGGCAGGACUCAUCUUAAAAAUCAUGUGUGGGAACAUUCUCCAUGGCCAGUGAGGAAGUCUUGAAGAAUAGAGCCAUAAAGAAAGCAAAGCGCAGAAAUGUUGGAUUUGAAUCUGACACUGGAGGAGCCU2000000009UUAAAGGUUUUAAAGGUUUGGUGGUACCUUCUGGAGGAGGACGCUUUUCUGGAUUUGGUAGUGGCGCUGGAGGGAAGCCUUUGGAAGGACUGUCGAAUGGAA2000000006ACAACAUAACCAGUGCCCCUCCCUUCGCCAGUGCAAAGGCAGCGGCAGAUCCCAAGGUAGCCUUUGGUUCUCUUGCUGCAAAUGGCCCUACCACCUUGGUUGAUAAAGUUUCAAAUCCCAAAACUAAUGGGG2000000006ACAGUCAGCAGCCCUCCUCCUCUGGCCUUGCUUCCAGUAAAGCUUGUGUCGGAAAUGCCUAUCACAAGCAGUUGGCCGCCUUGA2000000006ACUGCUCCGUGCGGGAUUGGAUAGUGAAGCACGUGAAUACAAACCCCCUCUGUGAUCUGACACCUAUCU2000000009UUAAAG2000000006ACUAUGAGAAAUAUUUAGCAAACAUUGAACAGCAACACGGGA2000000006ACAGUGGCAGGAAUUCUGAAAGUGAAUCUAACAAAGUGGCAGCUGAAACACAGUCUCCUUCCCUUUUUGGCUCAACAAAAUUACAGCAAGAGUCAACGUUUUUGUUUCAUGGCAACAAAACUGAAGAUACACCUGACAAGAAGAUGGAGGUGGCAUCUGAAAAGAAAACGG2000000006ACCCAUCAUCACUAGGAGCGACAAGUGCCUCAUUUAAUUUCGGCAAGAAAGUUGAUAGCUCUGUUUUGGGCUCAUUAAGCUCUGUCCCCCUG2000000006ACUGG2000000006AUUUUCUUUCUCCCCUGGAAACUCCAGUUUAUUUGGCAAAGAUACUACCCAGAGUAAACCAGUCUCUUCACCAUUUCCCACUAAACCAUUGGAGGGCCAAGCAGAAGGUGACAGUGGUGAAUGCAAAGGUGGAGAUGAAGAAGAGAAUGAUGAGCCACCCAAAGUAGUAGUUACCGAAGUAAAAGAAGAAGAUGCUUUUUACUCCAAAAAGUGUAAACUGUUUUACAAGAAAGACAAUGAGUUUAAAGAGAAAGGCAUAGGUACUCUGCAUUUAAAACCUACAGCAAAUCAGAAGACACAGCUUUUGGUGCGGGCAGACACCAAUUUAGGCAACAUAUUGCUGAACGUUCUGAUUCCACCCAAUAUGCCAUGUACGCGAACAGGGAAGAAUAACGUUCUUAUCGUCUGUGUUCCAAAUCCACCAAUUGACGAGAAGAAUGCCACCAUGCCAGUCACCAUGUUGAUUCGGGUAAAAACCAGCGAGGAUGCAGACGAGUUGCACAAAAUUUUACUGGAGAAAAAGGAUGCCUGAACACGCAAAGUCGGCUGCAGAAUUAUUGCCAAGUUGCUGCUGCUUCCACCGCCCCUUAAAGUUAGUCAGUUUUUCUUCUCUUCUUUG2000000006ACAUUCUAAGA2000000006ACUUAUAGAUA2000000006ACUUAAA2000000006ACUUUUGUGAGGAAGAUUAAUGUGGCCAAUAAAACCU2000000009UUAAAUGUUAAGUGUCAAGAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	486	588	720	804	873	879	921	1092	1184	1189	1808	1819	1830	1837	1874
Modification Positions	Y	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	22:45175913:+	22:45176015:+	22:45178304:+	22:45178388:+	22:45178457:+	22:45178463:+	22:45178505:+	22:45178676:+	22:45178768:+	22:45178773:+	22:45184743:+	22:45184754:+	22:45184765:+	22:45184772:+	22:45184809:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	5FhTyQVy2tKW KRfQJWH4K5KH msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 BkoLW2CBToyL BtsJQJ3DteUq Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se ArijeGVTwYBw WiQcrNTGZHPT Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	4HMi5ykupT9V jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw BkoLW2CBToyL WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	4HMi5ykupT9V jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm aJksAshEgQ8U D6ncpa2PPWj3 KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8