General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000397303
Gene ID:	ENSG00000100320
Gene Name:	RBFOX2
Sequence (UNICHARACTER ENCODING)	GGUAACCAGGAGCCGACAACAACUCCUGACGCAAUGGUUCAGCCUUUUACUACCAPCCCAUUUCCACCACCUCCGCAGAAUGGAAUUCCCACAGAGUAUGGGGUGCCACACACUCAAGACUAUGCCGGCCAGACCGGUGAGCAUAACCUGACACUCUACGGAAGUACGCAAGCCCACGGGGAGCAGAGCAGCAACUCACCCAGCACACAAAAUGGAUCUCUUACGCAGACAGAAGGUGGAGCACAGACAGACGGCCAGCAGUCACAGACACAAAGUAGUGAAAAUUCAGAGAGUAAAUCUACCCCGAAACGGCUGCAUGUCUCUAAUAUUCCUUUCCGCUUCCGGGACCCUGACCUCCGGCAGAUGUUUGGGCAGUUUGGCAAAAUCCUAGAUGUAGAAAUAAUCUPUAAUGAACGUGGCUCUAAGGGAUUCGGGUUCGUAACUUUCGAGAAUAGUGCUGAUGCAGACAGGGCCAGGGAGAAAUUACACGGCACCGUGGUAGAGGGCCGUAAAAUCGAGGUGAAUAAUGCUACAGCACGUGUAAUGACCAAUAAGAAGAUGGUCACACCAUAUGCAAAUGGUUGGAAAUUAAGCCCAGUAGUUGGAGCUGUAUAUGGUCCGGAGUUAUAUGCAGCAPCCAGCUUUCAAGCAGAUGUGUCCCUAGGCAAUGAUGCAGCAGUGCCCCUAUCAGGAAGAGGGGGUAUCAACACUUACAUUCCUPUAAUCAUUCCUGGCUUCCCUUACCCUACUGCAGCCACCACGGCAGCCGCUUUCAGAGGAGCCCAUUUGAGGGGCAGAGGGCGGACAGUAUAUGGUGCAGUCCGAGCGGUACCUCCAACAGCCAUCCCCGCCUAUCCAGGUGUGGUUUACCAGGACGGAUUUUACGGUGCUGACCUCUAUGGUGGAUAUGCAGCCUACAGAUAUGCACAGCCUGCUACUGCAACCGCAGCCACCGCUGCUGCAGCCGCUGCAGCCGCUUACAGUGACGGUUAUGGCAGGGUGUACACAGCCGACCCCUACCAUGCCCUUGCCCCUGCCGCUAGCUAUGGAGUUGGCGCUGUGGCGAGUUUAUACCGAGGUGGCUACAGCCGAUUUGCCCCCUACUGAAGUGACGUGAGACCCCUGCAAAUGGGACAGCCCCCCAGUUCAUGAGGCCUGGCUAUUGCAAUAUUUACUAGUAGAGGAЖCUCUAUAGCAAGAUGAAGAGGAAAAACAAACAAACAAACAAAAAAAAACACAAAAAAAGAAAGAAUACUUUUUUAUACCUCACUAUGUUCUUUGAAUAUGUAUUUUUCCUPUAAAUUUCUGCCUPUAAUUCUUUUGUUCCAAAGAUUGUGCAUUUUUUUCUUUUUUUU
Sequence (SHORT NAMES ENCODING)	GGUAACCAGGAGCCGACAACAACUCCUGACGCAAUGGUUCAGCCUUUUACUACCAYCCCAUUUCCACCACCUCCGCAGAAUGGAAUUCCCACAGAGUAUGGGGUGCCACACACUCAAGACUAUGCCGGCCAGACCGGUGAGCAUAACCUGACACUCUACGGAAGUACGCAAGCCCACGGGGAGCAGAGCAGCAACUCACCCAGCACACAAAAUGGAUCUCUUACGCAGACAGAAGGUGGAGCACAGACAGACGGCCAGCAGUCACAGACACAAAGUAGUGAAAAUUCAGAGAGUAAAUCUACCCCGAAACGGCUGCAUGUCUCUAAUAUUCCUUUCCGCUUCCGGGACCCUGACCUCCGGCAGAUGUUUGGGCAGUUUGGCAAAAUCCUAGAUGUAGAAAUAAUCUYUAAUGAACGUGGCUCUAAGGGAUUCGGGUUCGUAACUUUCGAGAAUAGUGCUGAUGCAGACAGGGCCAGGGAGAAAUUACACGGCACCGUGGUAGAGGGCCGUAAAAUCGAGGUGAAUAAUGCUACAGCACGUGUAAUGACCAAUAAGAAGAUGGUCACACCAUAUGCAAAUGGUUGGAAAUUAAGCCCAGUAGUUGGAGCUGUAUAUGGUCCGGAGUUAUAUGCAGCAYCCAGCUUUCAAGCAGAUGUGUCCCUAGGCAAUGAUGCAGCAGUGCCCCUAUCAGGAAGAGGGGGUAUCAACACUUACAUUCCUYUAAUCAUUCCUGGCUUCCCUUACCCUACUGCAGCCACCACGGCAGCCGCUUUCAGAGGAGCCCAUUUGAGGGGCAGAGGGCGGACAGUAUAUGGUGCAGUCCGAGCGGUACCUCCAACAGCCAUCCCCGCCUAUCCAGGUGUGGUUUACCAGGACGGAUUUUACGGUGCUGACCUCUAUGGUGGAUAUGCAGCCUACAGAUAUGCACAGCCUGCUACUGCAACCGCAGCCACCGCUGCUGCAGCCGCUGCAGCCGCUUACAGUGACGGUUAUGGCAGGGUGUACACAGCCGACCCCUACCAUGCCCUUGCCCCUGCCGCUAGCUAUGGAGUUGGCGCUGUGGCGAGUUUAUACCGAGGUGGCUACAGCCGAUUUGCCCCCUACUGAAGUGACGUGAGACCCCUGCAAAUGGGACAGCCCCCCAGUUCAUGAGGCCUGGCUAUUGCAAUAUUUACUAGUAGAGGAm6ACUCUAUAGCAAGAUGAAGAGGAAAAACAAACAAACAAACAAAAAAAAACACAAAAAAAGAAAGAAUACUUUUUUAUACCUCACUAUGUUCUUUGAAUAUGUAUUUUUCCUYUAAAUUUCUGCCUYUAAUUCUUUUGUUCCAAAGAUUGUGCAUUUUUUUCUUUUUUUU
Sequence (MODOMICS CODE ENCODING)	GGUAACCAGGAGCCGACAACAACUCCUGACGCAAUGGUUCAGCCUUUUACUACCA2000000009UCCCAUUUCCACCACCUCCGCAGAAUGGAAUUCCCACAGAGUAUGGGGUGCCACACACUCAAGACUAUGCCGGCCAGACCGGUGAGCAUAACCUGACACUCUACGGAAGUACGCAAGCCCACGGGGAGCAGAGCAGCAACUCACCCAGCACACAAAAUGGAUCUCUUACGCAGACAGAAGGUGGAGCACAGACAGACGGCCAGCAGUCACAGACACAAAGUAGUGAAAAUUCAGAGAGUAAAUCUACCCCGAAACGGCUGCAUGUCUCUAAUAUUCCUUUCCGCUUCCGGGACCCUGACCUCCGGCAGAUGUUUGGGCAGUUUGGCAAAAUCCUAGAUGUAGAAAUAAUCU2000000009UUAAUGAACGUGGCUCUAAGGGAUUCGGGUUCGUAACUUUCGAGAAUAGUGCUGAUGCAGACAGGGCCAGGGAGAAAUUACACGGCACCGUGGUAGAGGGCCGUAAAAUCGAGGUGAAUAAUGCUACAGCACGUGUAAUGACCAAUAAGAAGAUGGUCACACCAUAUGCAAAUGGUUGGAAAUUAAGCCCAGUAGUUGGAGCUGUAUAUGGUCCGGAGUUAUAUGCAGCA2000000009UCCAGCUUUCAAGCAGAUGUGUCCCUAGGCAAUGAUGCAGCAGUGCCCCUAUCAGGAAGAGGGGGUAUCAACACUUACAUUCCU2000000009UUAAUCAUUCCUGGCUUCCCUUACCCUACUGCAGCCACCACGGCAGCCGCUUUCAGAGGAGCCCAUUUGAGGGGCAGAGGGCGGACAGUAUAUGGUGCAGUCCGAGCGGUACCUCCAACAGCCAUCCCCGCCUAUCCAGGUGUGGUUUACCAGGACGGAUUUUACGGUGCUGACCUCUAUGGUGGAUAUGCAGCCUACAGAUAUGCACAGCCUGCUACUGCAACCGCAGCCACCGCUGCUGCAGCCGCUGCAGCCGCUUACAGUGACGGUUAUGGCAGGGUGUACACAGCCGACCCCUACCAUGCCCUUGCCCCUGCCGCUAGCUAUGGAGUUGGCGCUGUGGCGAGUUUAUACCGAGGUGGCUACAGCCGAUUUGCCCCCUACUGAAGUGACGUGAGACCCCUGCAAAUGGGACAGCCCCCCAGUUCAUGAGGCCUGGCUAUUGCAAUAUUUACUAGUAGAGGA2000000006ACUCUAUAGCAAGAUGAAGAGGAAAAACAAACAAACAAACAAAAAAAAACACAAAAAAAGAAAGAAUACUUUUUUAUACCUCACUAUGUUCUUUGAAUAUGUAUUUUUCCU2000000009UUAAAUUUCUGCCU2000000009UUAAUUCUUUUGUUCCAAAGAUUGUGCAUUUUUUUCUUUUUUUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	56	407	637	721	1186	1297	1311
Modification Positions	Y	Y	Y	Y	m6A	Y	Y
Genomic Coordinates	22:35809949:-	22:35778044:-	22:35761292:-	22:35761208:-	22:35744126:-	22:35744015:-	22:35744001:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8