General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000419830
Gene ID:	ENSG00000138592
Gene Name:	USP8
Sequence (UNICHARACTER ENCODING)	AAUCCUGUUCACCCGGGAGGGGAGCCCUCAUGGCCUUAUCACCUCUUUAAAGGCCCCAUCUCUUAAUCCUGUCACAUUGGCAACACCUGAAUUUUGGAAUAUUUGACGUGAAUCUGGUGGUAACCUAUGAAUAAGUAAGCAUUUUGGUGUAGGGCUACAGUAUGUGAAUAAUUUCAUGUUGACAUCAAGAACCCAUUUUACCUUUCAAACCAUAGUACUUACCACUCAGCUCCAGAAAAGUCAAAUUAGGAAAGGGGAAAAUAUCUUUAUCCUUAGGAAUAAUGAAGGCUGGGCAUGGUGGCUCACACUGGUAAUCCUAGCACUUUGGGAGGCUGACGUGGGCAGAUCACUUGGGGCCCAGGAGUUUGAGACCAGUCUGGGCAACAAGGCAAAACUCCGUCUCUACAAAAAUUAGCUAGGUGUGGUGAUACAUGCCUAUAGUCCCUGCUACUUGGGAGGCUAAGGUGGGAGGAUCACCUGAGCCCAGAAGGUCAAGGCUGCAGUGAGCCGUGAUUGUGCCGCUAUACUCCACCAGCCUGGGUGACAGAAUGAGACCCUAUCUCAAAAAAGAGUAAAGCCUUCUCUGAUUAGUAAAGGACAGACAGGAUGAGAGCAGUGCCAGAAGGCAGAACCUCGCUGUCAUGAACUGGAGCCUGUUGAUGAUGAGGAGACCAUGCAGGGCUUGCAGCCAAAAGAAGGAAGCUGAAGGGAUGUAAGCAAGUCAGAUUCAGAUGAGAAUCUGGUGGUGAGCCUGCAAAUAAAUAAGUAGUUUAAUGUAGUGCUACAGUAUGUGAAUAAUUUCAUGUUGACAUCAAGAAUCUACUGUACCUUGCUUAACUUUUAAAUUUCCUUUAUUGUCUUUUGUAACAACUUUUAUUUGCACAGGUCAAAUUUGUUGGGGCAUAAAGGUGAAGUGGCAGAAGAAUUUGGUAUAAUCAUGAAAGCCCUGUGGACAGGACAGUAUAGAUAUAUCAGUCCAAAGGЖCUPUAAAAUCACCAUUGGGAAGAUCAAUGACCAGUUUGCAGGAUACAGUCAGCAAGAUUCACAAGAAUUGCUUCUGUUCCUAAUGGAUGGUCUCCAUGAAGAUCUAAAUAAAGCUGAUAAUCGGAAGAGAUAUAAAGAAGAAAAUAAUGAUCAUCUCGAUGACUPUAAAGCUGCAGAACAUGCCUGGCAGAAACACAAGCAGCUCAAUGAGUCUAUUAUUGUUGCACUUUUUCAGGGUCAAUUCAAAUCUACAGUACAGUGCCUCACAUGUCACAAAAAGUCUAGGACAUUUGAGGCCUUCAUGUAUUUGUCUCUACCACUAGCAPCCACAAGUAAAUGUACAUUACAGGAUUGCCUUAGAUUAUUUUCCAAAGAAGAAAAACUCACAGAUAACAACAGAUUUUACUGCAGUCAUUGCAGAGCUCGACGGGAUUCUCUAAAAAAGAUAGAAAUCUGGAAGUUACCACCUGUGCUUUUAGUGCAUCUGAAACGUUUUUCCUACGAUGGCAGGUGGAAACAAAAAUUACAGACAUCUGUGGACUUCCCGUUAGAAAAUCUUGACUUGUCACAGUAUGUUAUUGGUCCAAAGAACAAUUUGAAGAAAUAUAAUUUGUUUUCUGUUUCAAAUCACUACGGUGGGCUGGAUGGAGGCCACUACACAGCCUAUUGUAAAAAUGCAGCAAGACAACGGUGGUUUAAGUUUGAUGAUCAUGAAGUUUCUGAUAUCUCCGUUUCUUCUGUGAAAUCUUCAGCAGCUUAUAUCCUCUUUUAUACUUCAUUGGGACCACGAGUAACUGAUGUAGCCACAUAAGGAGACAUAGGUUAUAAACUAGUUAUCUUUUAAAAGGCUCAGCAACACAACUCUUGAAAUGCUUAUCAGGAUAAUGGUAGCUAUAGCUGGCCAUUUAGAGGAAUUCUAGGACAGUGGGAGCUGUGUUACUAGCACUAUAUAAUUCCGGUCAGUGCUGACAAAUAACAUUUAACAAGUAUUGCAGUAAUCAUCACUUACAGGUACCAUUUAUUUCAAAACAACUUUUUUAGUCUGCUCCAAAGUUAAAAUAAUUAACUAGCUAAGCAUUAUUAUUCGACUGGUCUAAAAACUAUUGUUAUCUUUUUUUUUUCCUUUUCACUGUUAUGGCCUUUUCACAUUUCUAAAUCCCAUCUUGAUAUACUAUGAAUACUCUAGAAUGAUGUAAAGCAGAUAGGAAUGUAUGUGUACAUAUUUAUUGCAUACUUGCACAUCAAAUCGAUGUACAUAGUUUAЖCACGUGGUCCUUUUGUGAAACCUAGAACUCAGAGGAUUGCUUUUUUUCUUUCAGCCUAUUUUGAGUUAЖCUUCAGUGCUUUCUUAGGGAAAUGACAGGGCAAAGCAAUUUUUCUGUUGGCUUUGGGCUGUAUUUGUGCACUAAAUCUPUAUUCU
Sequence (SHORT NAMES ENCODING)	AAUCCUGUUCACCCGGGAGGGGAGCCCUCAUGGCCUUAUCACCUCUUUAAAGGCCCCAUCUCUUAAUCCUGUCACAUUGGCAACACCUGAAUUUUGGAAUAUUUGACGUGAAUCUGGUGGUAACCUAUGAAUAAGUAAGCAUUUUGGUGUAGGGCUACAGUAUGUGAAUAAUUUCAUGUUGACAUCAAGAACCCAUUUUACCUUUCAAACCAUAGUACUUACCACUCAGCUCCAGAAAAGUCAAAUUAGGAAAGGGGAAAAUAUCUUUAUCCUUAGGAAUAAUGAAGGCUGGGCAUGGUGGCUCACACUGGUAAUCCUAGCACUUUGGGAGGCUGACGUGGGCAGAUCACUUGGGGCCCAGGAGUUUGAGACCAGUCUGGGCAACAAGGCAAAACUCCGUCUCUACAAAAAUUAGCUAGGUGUGGUGAUACAUGCCUAUAGUCCCUGCUACUUGGGAGGCUAAGGUGGGAGGAUCACCUGAGCCCAGAAGGUCAAGGCUGCAGUGAGCCGUGAUUGUGCCGCUAUACUCCACCAGCCUGGGUGACAGAAUGAGACCCUAUCUCAAAAAAGAGUAAAGCCUUCUCUGAUUAGUAAAGGACAGACAGGAUGAGAGCAGUGCCAGAAGGCAGAACCUCGCUGUCAUGAACUGGAGCCUGUUGAUGAUGAGGAGACCAUGCAGGGCUUGCAGCCAAAAGAAGGAAGCUGAAGGGAUGUAAGCAAGUCAGAUUCAGAUGAGAAUCUGGUGGUGAGCCUGCAAAUAAAUAAGUAGUUUAAUGUAGUGCUACAGUAUGUGAAUAAUUUCAUGUUGACAUCAAGAAUCUACUGUACCUUGCUUAACUUUUAAAUUUCCUUUAUUGUCUUUUGUAACAACUUUUAUUUGCACAGGUCAAAUUUGUUGGGGCAUAAAGGUGAAGUGGCAGAAGAAUUUGGUAUAAUCAUGAAAGCCCUGUGGACAGGACAGUAUAGAUAUAUCAGUCCAAAGGm6ACUYUAAAAUCACCAUUGGGAAGAUCAAUGACCAGUUUGCAGGAUACAGUCAGCAAGAUUCACAAGAAUUGCUUCUGUUCCUAAUGGAUGGUCUCCAUGAAGAUCUAAAUAAAGCUGAUAAUCGGAAGAGAUAUAAAGAAGAAAAUAAUGAUCAUCUCGAUGACUYUAAAGCUGCAGAACAUGCCUGGCAGAAACACAAGCAGCUCAAUGAGUCUAUUAUUGUUGCACUUUUUCAGGGUCAAUUCAAAUCUACAGUACAGUGCCUCACAUGUCACAAAAAGUCUAGGACAUUUGAGGCCUUCAUGUAUUUGUCUCUACCACUAGCAYCCACAAGUAAAUGUACAUUACAGGAUUGCCUUAGAUUAUUUUCCAAAGAAGAAAAACUCACAGAUAACAACAGAUUUUACUGCAGUCAUUGCAGAGCUCGACGGGAUUCUCUAAAAAAGAUAGAAAUCUGGAAGUUACCACCUGUGCUUUUAGUGCAUCUGAAACGUUUUUCCUACGAUGGCAGGUGGAAACAAAAAUUACAGACAUCUGUGGACUUCCCGUUAGAAAAUCUUGACUUGUCACAGUAUGUUAUUGGUCCAAAGAACAAUUUGAAGAAAUAUAAUUUGUUUUCUGUUUCAAAUCACUACGGUGGGCUGGAUGGAGGCCACUACACAGCCUAUUGUAAAAAUGCAGCAAGACAACGGUGGUUUAAGUUUGAUGAUCAUGAAGUUUCUGAUAUCUCCGUUUCUUCUGUGAAAUCUUCAGCAGCUUAUAUCCUCUUUUAUACUUCAUUGGGACCACGAGUAACUGAUGUAGCCACAUAAGGAGACAUAGGUUAUAAACUAGUUAUCUUUUAAAAGGCUCAGCAACACAACUCUUGAAAUGCUUAUCAGGAUAAUGGUAGCUAUAGCUGGCCAUUUAGAGGAAUUCUAGGACAGUGGGAGCUGUGUUACUAGCACUAUAUAAUUCCGGUCAGUGCUGACAAAUAACAUUUAACAAGUAUUGCAGUAAUCAUCACUUACAGGUACCAUUUAUUUCAAAACAACUUUUUUAGUCUGCUCCAAAGUUAAAAUAAUUAACUAGCUAAGCAUUAUUAUUCGACUGGUCUAAAAACUAUUGUUAUCUUUUUUUUUUCCUUUUCACUGUUAUGGCCUUUUCACAUUUCUAAAUCCCAUCUUGAUAUACUAUGAAUACUCUAGAAUGAUGUAAAGCAGAUAGGAAUGUAUGUGUACAUAUUUAUUGCAUACUUGCACAUCAAAUCGAUGUACAUAGUUUAm6ACACGUGGUCCUUUUGUGAAACCUAGAACUCAGAGGAUUGCUUUUUUUCUUUCAGCCUAUUUUGAGUUAm6ACUUCAGUGCUUUCUUAGGGAAAUGACAGGGCAAAGCAAUUUUUCUGUUGGCUUUGGGCUGUAUUUGUGCACUAAAUCUYUAUUCU
Sequence (MODOMICS CODE ENCODING)	AAUCCUGUUCACCCGGGAGGGGAGCCCUCAUGGCCUUAUCACCUCUUUAAAGGCCCCAUCUCUUAAUCCUGUCACAUUGGCAACACCUGAAUUUUGGAAUAUUUGACGUGAAUCUGGUGGUAACCUAUGAAUAAGUAAGCAUUUUGGUGUAGGGCUACAGUAUGUGAAUAAUUUCAUGUUGACAUCAAGAACCCAUUUUACCUUUCAAACCAUAGUACUUACCACUCAGCUCCAGAAAAGUCAAAUUAGGAAAGGGGAAAAUAUCUUUAUCCUUAGGAAUAAUGAAGGCUGGGCAUGGUGGCUCACACUGGUAAUCCUAGCACUUUGGGAGGCUGACGUGGGCAGAUCACUUGGGGCCCAGGAGUUUGAGACCAGUCUGGGCAACAAGGCAAAACUCCGUCUCUACAAAAAUUAGCUAGGUGUGGUGAUACAUGCCUAUAGUCCCUGCUACUUGGGAGGCUAAGGUGGGAGGAUCACCUGAGCCCAGAAGGUCAAGGCUGCAGUGAGCCGUGAUUGUGCCGCUAUACUCCACCAGCCUGGGUGACAGAAUGAGACCCUAUCUCAAAAAAGAGUAAAGCCUUCUCUGAUUAGUAAAGGACAGACAGGAUGAGAGCAGUGCCAGAAGGCAGAACCUCGCUGUCAUGAACUGGAGCCUGUUGAUGAUGAGGAGACCAUGCAGGGCUUGCAGCCAAAAGAAGGAAGCUGAAGGGAUGUAAGCAAGUCAGAUUCAGAUGAGAAUCUGGUGGUGAGCCUGCAAAUAAAUAAGUAGUUUAAUGUAGUGCUACAGUAUGUGAAUAAUUUCAUGUUGACAUCAAGAAUCUACUGUACCUUGCUUAACUUUUAAAUUUCCUUUAUUGUCUUUUGUAACAACUUUUAUUUGCACAGGUCAAAUUUGUUGGGGCAUAAAGGUGAAGUGGCAGAAGAAUUUGGUAUAAUCAUGAAAGCCCUGUGGACAGGACAGUAUAGAUAUAUCAGUCCAAAGG2000000006ACU2000000009UUAAAAUCACCAUUGGGAAGAUCAAUGACCAGUUUGCAGGAUACAGUCAGCAAGAUUCACAAGAAUUGCUUCUGUUCCUAAUGGAUGGUCUCCAUGAAGAUCUAAAUAAAGCUGAUAAUCGGAAGAGAUAUAAAGAAGAAAAUAAUGAUCAUCUCGAUGACU2000000009UUAAAGCUGCAGAACAUGCCUGGCAGAAACACAAGCAGCUCAAUGAGUCUAUUAUUGUUGCACUUUUUCAGGGUCAAUUCAAAUCUACAGUACAGUGCCUCACAUGUCACAAAAAGUCUAGGACAUUUGAGGCCUUCAUGUAUUUGUCUCUACCACUAGCA2000000009UCCACAAGUAAAUGUACAUUACAGGAUUGCCUUAGAUUAUUUUCCAAAGAAGAAAAACUCACAGAUAACAACAGAUUUUACUGCAGUCAUUGCAGAGCUCGACGGGAUUCUCUAAAAAAGAUAGAAAUCUGGAAGUUACCACCUGUGCUUUUAGUGCAUCUGAAACGUUUUUCCUACGAUGGCAGGUGGAAACAAAAAUUACAGACAUCUGUGGACUUCCCGUUAGAAAAUCUUGACUUGUCACAGUAUGUUAUUGGUCCAAAGAACAAUUUGAAGAAAUAUAAUUUGUUUUCUGUUUCAAAUCACUACGGUGGGCUGGAUGGAGGCCACUACACAGCCUAUUGUAAAAAUGCAGCAAGACAACGGUGGUUUAAGUUUGAUGAUCAUGAAGUUUCUGAUAUCUCCGUUUCUUCUGUGAAAUCUUCAGCAGCUUAUAUCCUCUUUUAUACUUCAUUGGGACCACGAGUAACUGAUGUAGCCACAUAAGGAGACAUAGGUUAUAAACUAGUUAUCUUUUAAAAGGCUCAGCAACACAACUCUUGAAAUGCUUAUCAGGAUAAUGGUAGCUAUAGCUGGCCAUUUAGAGGAAUUCUAGGACAGUGGGAGCUGUGUUACUAGCACUAUAUAAUUCCGGUCAGUGCUGACAAAUAACAUUUAACAAGUAUUGCAGUAAUCAUCACUUACAGGUACCAUUUAUUUCAAAACAACUUUUUUAGUCUGCUCCAAAGUUAAAAUAAUUAACUAGCUAAGCAUUAUUAUUCGACUGGUCUAAAAACUAUUGUUAUCUUUUUUUUUUCCUUUUCACUGUUAUGGCCUUUUCACAUUUCUAAAUCCCAUCUUGAUAUACUAUGAAUACUCUAGAAUGAUGUAAAGCAGAUAGGAAUGUAUGUGUACAUAUUUAUUGCAUACUUGCACAUCAAAUCGAUGUACAUAGUUUA2000000006ACACGUGGUCCUUUUGUGAAACCUAGAACUCAGAGGAUUGCUUUUUUUCUUUCAGCCUAUUUUGAGUUA2000000006ACUUCAGUGCUUUCUUAGGGAAAUGACAGGGCAAAGCAAUUUUUCUGUUGGCUUUGGGCUGUAUUUGUGCACUAAAUCU2000000009UUAUUCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	984	987	1149	1310	2248	2317	2396
Modification Positions	m6A	Y	Y	Y	m6A	m6A	Y
Genomic Coordinates	15:50494168:+	15:50494171:+	15:50495900:+	15:50496061:+	15:50499541:+	15:50499610:+	15:50499689:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 a7o5Kmjr4Tdp	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 a7o5Kmjr4Tdp Yfn77uLS5tv8