General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000651590
Gene ID:	ENSG00000140416
Gene Name:	TPM1
Sequence (UNICHARACTER ENCODING)	AGGACAGCCGCGGCAGCCGGGUCCGCAGGGCAGCAGCCGGCCUCUCCCACUGCAGCCCUCCCGCCCGCCUACCGUCCGGCGCGAUGGCGGGGAGUAGCUCGCUGGAGGCGGUGCGCAGGAAGAUCCGGAGCCUGCAGGAGCAGGCGGACGCCGCUGAGGAGCGCGCGGGCACCCUGCAGCGCGAGCUGGACCACGAGAGGAAGCUGAGGGAGЖCCGCUGAAGCCGACGUAGCUUCUCUGAЖCAGACGCAPCCAGCUGGUUGAGGAAGAGUUGGAUCGUGCCCAGGAGCGUCUGGCAACAGCUUUGCAGAAGCUGGAGGAAGCUGAGAAGGCAGCAGAUGAGAGUGAGAGAGGCAUGAAAGUCAUUGAGAGUCGAGCCCAAAAAGAUGAAGAAAAAAUGGAAAUUCAGGAGAUCCAACUGAAAGAGGCCAAGCACAUUGCUGAAGAUGCCGACCGCAAAUAUGAAGAGGUGGCCCGUAAGCUGGUCAUCAUUGAGAGCGACCUGGAACGUGCAGAGGAGCGGGCUGAGCUCUCAGAAGGCAAAUGUGCCGAGCUUGAAGAAGAAUUGAAAACUGUGACGAACAACUUGAAGUCACUGGAGGCUCAGGCUGAGAAGUACUCGCAGAAGGAAGACAGAUAUGAGGAAGAGAUCAAGGUCCUUUCCGACAAGCUGAAGGAGGCUGAGACUCGGGCUGAGUUUGCGGAGAGGUCAGUAACUAAAUUGGAGAAAAGCAUUGAUGACUUAGAAGAUAAGUUUCUUUGCUUCACUUCUCCCAAGACUCCCUCGUCGAGCUGGAUGUCCCACCUCUCUGAGCUCUGCAUUUGUCUAUUCUCCAGCUGACCCUGGUUCUCUCUCUUAGCAPCCUGCCUUAGAGCCAGGCACACACUGUGCUUUCUAUUGUACAGAAGCUCUUCGUUUCAGUGUCAAAUAAACACUGUAUCAACUCUACCAGCAACUUGAGCAAAAUCGCCGCCUCACUAAUGAACUAAAGCUGGCCCUGAAUGAGGAUUAAACUUAAGAGUGAAAAAACUUGGGCUGAAUUCUAGGCGUGGAGCCCAUGUGCAGAAAAUCUAAGACUGUCCUACCUUCAACUAAUAGAGUUGAAAACAGUUGCUUUCUGCAGAAAUGCAAAUGCAAGGAAUUGGCUGAAAGGCUGGCCUUGCCUGCUUGUUUCUCUAUAUGGCUGGAAUAAUUACGUUCUCUUUAAUCACAAAACAGCUUUUAUGGUAGAAUACUUAUAUCAAUUCAGCACUGCUCCUUGAAAUAGCAGGUCCUCUUGUUUGAACUGAUAAAUAAUGAGGAGCCCCCCCAAAAAAUGUUUUCUAUUUCCUGACAGCCAUGAGUCCUACUUUAAGUAUGUAUAUAUAUAUAUAUAUGUGUGUG
Sequence (SHORT NAMES ENCODING)	AGGACAGCCGCGGCAGCCGGGUCCGCAGGGCAGCAGCCGGCCUCUCCCACUGCAGCCCUCCCGCCCGCCUACCGUCCGGCGCGAUGGCGGGGAGUAGCUCGCUGGAGGCGGUGCGCAGGAAGAUCCGGAGCCUGCAGGAGCAGGCGGACGCCGCUGAGGAGCGCGCGGGCACCCUGCAGCGCGAGCUGGACCACGAGAGGAAGCUGAGGGAGm6ACCGCUGAAGCCGACGUAGCUUCUCUGAm6ACAGACGCAYCCAGCUGGUUGAGGAAGAGUUGGAUCGUGCCCAGGAGCGUCUGGCAACAGCUUUGCAGAAGCUGGAGGAAGCUGAGAAGGCAGCAGAUGAGAGUGAGAGAGGCAUGAAAGUCAUUGAGAGUCGAGCCCAAAAAGAUGAAGAAAAAAUGGAAAUUCAGGAGAUCCAACUGAAAGAGGCCAAGCACAUUGCUGAAGAUGCCGACCGCAAAUAUGAAGAGGUGGCCCGUAAGCUGGUCAUCAUUGAGAGCGACCUGGAACGUGCAGAGGAGCGGGCUGAGCUCUCAGAAGGCAAAUGUGCCGAGCUUGAAGAAGAAUUGAAAACUGUGACGAACAACUUGAAGUCACUGGAGGCUCAGGCUGAGAAGUACUCGCAGAAGGAAGACAGAUAUGAGGAAGAGAUCAAGGUCCUUUCCGACAAGCUGAAGGAGGCUGAGACUCGGGCUGAGUUUGCGGAGAGGUCAGUAACUAAAUUGGAGAAAAGCAUUGAUGACUUAGAAGAUAAGUUUCUUUGCUUCACUUCUCCCAAGACUCCCUCGUCGAGCUGGAUGUCCCACCUCUCUGAGCUCUGCAUUUGUCUAUUCUCCAGCUGACCCUGGUUCUCUCUCUUAGCAYCCUGCCUUAGAGCCAGGCACACACUGUGCUUUCUAUUGUACAGAAGCUCUUCGUUUCAGUGUCAAAUAAACACUGUAUCAACUCUACCAGCAACUUGAGCAAAAUCGCCGCCUCACUAAUGAACUAAAGCUGGCCCUGAAUGAGGAUUAAACUUAAGAGUGAAAAAACUUGGGCUGAAUUCUAGGCGUGGAGCCCAUGUGCAGAAAAUCUAAGACUGUCCUACCUUCAACUAAUAGAGUUGAAAACAGUUGCUUUCUGCAGAAAUGCAAAUGCAAGGAAUUGGCUGAAAGGCUGGCCUUGCCUGCUUGUUUCUCUAUAUGGCUGGAAUAAUUACGUUCUCUUUAAUCACAAAACAGCUUUUAUGGUAGAAUACUUAUAUCAAUUCAGCACUGCUCCUUGAAAUAGCAGGUCCUCUUGUUUGAACUGAUAAAUAAUGAGGAGCCCCCCCAAAAAAUGUUUUCUAUUUCCUGACAGCCAUGAGUCCUACUUUAAGUAUGUAUAUAUAUAUAUAUAUGUGUGUG
Sequence (MODOMICS CODE ENCODING)	AGGACAGCCGCGGCAGCCGGGUCCGCAGGGCAGCAGCCGGCCUCUCCCACUGCAGCCCUCCCGCCCGCCUACCGUCCGGCGCGAUGGCGGGGAGUAGCUCGCUGGAGGCGGUGCGCAGGAAGAUCCGGAGCCUGCAGGAGCAGGCGGACGCCGCUGAGGAGCGCGCGGGCACCCUGCAGCGCGAGCUGGACCACGAGAGGAAGCUGAGGGAG2000000006ACCGCUGAAGCCGACGUAGCUUCUCUGA2000000006ACAGACGCA2000000009UCCAGCUGGUUGAGGAAGAGUUGGAUCGUGCCCAGGAGCGUCUGGCAACAGCUUUGCAGAAGCUGGAGGAAGCUGAGAAGGCAGCAGAUGAGAGUGAGAGAGGCAUGAAAGUCAUUGAGAGUCGAGCCCAAAAAGAUGAAGAAAAAAUGGAAAUUCAGGAGAUCCAACUGAAAGAGGCCAAGCACAUUGCUGAAGAUGCCGACCGCAAAUAUGAAGAGGUGGCCCGUAAGCUGGUCAUCAUUGAGAGCGACCUGGAACGUGCAGAGGAGCGGGCUGAGCUCUCAGAAGGCAAAUGUGCCGAGCUUGAAGAAGAAUUGAAAACUGUGACGAACAACUUGAAGUCACUGGAGGCUCAGGCUGAGAAGUACUCGCAGAAGGAAGACAGAUAUGAGGAAGAGAUCAAGGUCCUUUCCGACAAGCUGAAGGAGGCUGAGACUCGGGCUGAGUUUGCGGAGAGGUCAGUAACUAAAUUGGAGAAAAGCAUUGAUGACUUAGAAGAUAAGUUUCUUUGCUUCACUUCUCCCAAGACUCCCUCGUCGAGCUGGAUGUCCCACCUCUCUGAGCUCUGCAUUUGUCUAUUCUCCAGCUGACCCUGGUUCUCUCUCUUAGCA2000000009UCCUGCCUUAGAGCCAGGCACACACUGUGCUUUCUAUUGUACAGAAGCUCUUCGUUUCAGUGUCAAAUAAACACUGUAUCAACUCUACCAGCAACUUGAGCAAAAUCGCCGCCUCACUAAUGAACUAAAGCUGGCCCUGAAUGAGGAUUAAACUUAAGAGUGAAAAAACUUGGGCUGAAUUCUAGGCGUGGAGCCCAUGUGCAGAAAAUCUAAGACUGUCCUACCUUCAACUAAUAGAGUUGAAAACAGUUGCUUUCUGCAGAAAUGCAAAUGCAAGGAAUUGGCUGAAAGGCUGGCCUUGCCUGCUUGUUUCUCUAUAUGGCUGGAAUAAUUACGUUCUCUUUAAUCACAAAACAGCUUUUAUGGUAGAAUACUUAUAUCAAUUCAGCACUGCUCCUUGAAAUAGCAGGUCCUCUUGUUUGAACUGAUAAAUAAUGAGGAGCCCCCCCAAAAAAUGUUUUCUAUUUCCUGACAGCCAUGAGUCCUACUUUAAGUAUGUAUAUAUAUAUAUAUAUGUGUGUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	213	241	250	861
Modification Positions	m6A	m6A	Y	Y
Genomic Coordinates	15:63048705:+	15:63057010:+	15:63057019:+	15:63066009:+
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE