General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000561691
Gene ID:	ENSG00000137822
Gene Name:	TUBGCP4
Sequence (UNICHARACTER ENCODING)	AUGGAAUCUACCUGCGGGCCUUCUGCACAGGGCUGGAUUCUGUUUUGCAGCCUUAUCGCCAAGCACUGCUUGAUUUGGAACAAGAGUUCCUGGGUGAUCCCCAUCUCUCCAUAUCACAUGUCAACUACUUCCUAGACCAGUUCCAGCUUCUUUUUCCCUCUGUGAUGGUUGUAGUAGAACAAAUUAAAAGUCAAAAGAUUCAUGGUUGUCAAAUCCUGGAAACAGUCUACAAACACAGCUGUGGGGGGUUGCCUCCUGUUCGAAGUGCACUGGAAAAAAUCCUGGCCGUUUGUCAUGGGGUCAUGUAUAAЖCAGCUCUCAGCCUGGAUGCUCCAUGGACUCCUCUUGGACCAGCAUGAAGAAUUCUPUAUCAAACAGGGGCCAUCUUCUGGUAAUGUCAGUGCCCAGCCAGAAGAGGACGAGGAGGAUCUGGGCAUUGGGGGACUGACAGGAAAACAACUGAGAGAACUGCAGGACUUGCGCCUGAUUGAGGAAGAGAACAUGCUGGCACCAUCUCUGAAGCAGUUUUCCCUACGAGUGGAGAUUUUGCCAUCCUACAUUCCAGUGAGGGUUGCUGAAAAAAUCCUAUUUGUUGGAGAAUCUGUCCAGAUGUUUGAGAAUCAAAAUGUGAACCUGACUAGAAAAGGAUCCAUUUUGAAAAACCAGGAAGЖCACUUUUGCUGCAGAGCUGCACCGUCUCAAGCAGCAGCCACUCUUCAGCUUGGUGGACUUUGAACAGGUGGUGGAUCGCAUUCGCAGCACUGUGGCUGAGCAUCUCUGGAAGUUGAUGGUAGAAGAAUCCGAUUUACUGGGUCAGCUGAAGAUCAUUAAAGACUUUUACCUUCUGGGACGUGGAGAACUGUUUCAGGCCUUCAUUGACACAGCUCAACACAUGUUGAAAACACCACCCACUGCAGUAACUGAGCAUGAUGUGAAUGUGGCCUUUCAACAGUCAGCACACAAGGUAUUGCUAGAUGAUGACAACCUUCUCCCUCUGUUGCACUUGACAAUCGAGUAUCACGGAAAGGAGCACAAAGCAGAUGCUACUCAGGCAAGAGAAGGGCCUUCUCGGGAAACUUCUCCCCGGGAAGCCCCUGCAUCUGGCUGGGCAGCCCUAGGUCUUUCCUACAAAGUACAGUGGCCACUACAUAUUCUCUUCACCCCAGCUGUCCUGGAAAAAAAUAGACAAUUUUAAAAACCAAACAGAAUGGGACUGUCUUCUGCAAGCCUACCUACAAACAGGUACAAUGUUGUUUUUAAGUACUUACUGAGUGUGCGCCGGGUGCAAGCUGAGCUGCAGCACUGCUGGGCCCUACAAAUGCAGCGCAAGCACCUCAAGUCGAACCAGACUGAUGCAAUCAAGUGGCGCCUAAGAAAUCACAUGGCAUUUUUGGUGGAUAAUCUUCAGUACUAUCUCCAGGUAGAUGUGUUGGAGUCUCAGUUCUCCCAGCUGCUUCAUCAGAUCAAUUCUACCCGAGACUUUGAAAGCAPCCGAUUGGCUCAUGACCACUUCCUGAGCAAUUUGCUGGCUCAAUCCUPUAUCCUAUUGAAACCUGUGUUUCACUGCCUGAAUGAAAUCCUAGAUCUCUGUCACAGUUUUUGUUCGCUGGUCAGUCAGAACCUAGGCCCACUGGAUGAGCGUGGAGCCGCCCAGCUGAGCAUUCUCGUGAAGGGCUPUAGCCGCCAGUCUUCACUCCUGUUCAAGAUUCUCUCCAGUGUUCGGAAUCAUCAGAUCAACUCAGAUUUGGCUCAACUACUGUUACGACUAGAUUAUAACAAAUACUAUACCCAGGCUGGUGGAACUCUGGGCAGUUUCGGGAUGUGAAAAUUUCUGGCUCAUAAAUUGAAAUAACAGCCACGUUCCCAAGGUUGUAACAGAAGAUUCAAAACAPCCCAUUCUAGCCACACACAAAUAAAUAUCUGCGGCUUA
Sequence (SHORT NAMES ENCODING)	AUGGAAUCUACCUGCGGGCCUUCUGCACAGGGCUGGAUUCUGUUUUGCAGCCUUAUCGCCAAGCACUGCUUGAUUUGGAACAAGAGUUCCUGGGUGAUCCCCAUCUCUCCAUAUCACAUGUCAACUACUUCCUAGACCAGUUCCAGCUUCUUUUUCCCUCUGUGAUGGUUGUAGUAGAACAAAUUAAAAGUCAAAAGAUUCAUGGUUGUCAAAUCCUGGAAACAGUCUACAAACACAGCUGUGGGGGGUUGCCUCCUGUUCGAAGUGCACUGGAAAAAAUCCUGGCCGUUUGUCAUGGGGUCAUGUAUAAm6ACAGCUCUCAGCCUGGAUGCUCCAUGGACUCCUCUUGGACCAGCAUGAAGAAUUCUYUAUCAAACAGGGGCCAUCUUCUGGUAAUGUCAGUGCCCAGCCAGAAGAGGACGAGGAGGAUCUGGGCAUUGGGGGACUGACAGGAAAACAACUGAGAGAACUGCAGGACUUGCGCCUGAUUGAGGAAGAGAACAUGCUGGCACCAUCUCUGAAGCAGUUUUCCCUACGAGUGGAGAUUUUGCCAUCCUACAUUCCAGUGAGGGUUGCUGAAAAAAUCCUAUUUGUUGGAGAAUCUGUCCAGAUGUUUGAGAAUCAAAAUGUGAACCUGACUAGAAAAGGAUCCAUUUUGAAAAACCAGGAAGm6ACACUUUUGCUGCAGAGCUGCACCGUCUCAAGCAGCAGCCACUCUUCAGCUUGGUGGACUUUGAACAGGUGGUGGAUCGCAUUCGCAGCACUGUGGCUGAGCAUCUCUGGAAGUUGAUGGUAGAAGAAUCCGAUUUACUGGGUCAGCUGAAGAUCAUUAAAGACUUUUACCUUCUGGGACGUGGAGAACUGUUUCAGGCCUUCAUUGACACAGCUCAACACAUGUUGAAAACACCACCCACUGCAGUAACUGAGCAUGAUGUGAAUGUGGCCUUUCAACAGUCAGCACACAAGGUAUUGCUAGAUGAUGACAACCUUCUCCCUCUGUUGCACUUGACAAUCGAGUAUCACGGAAAGGAGCACAAAGCAGAUGCUACUCAGGCAAGAGAAGGGCCUUCUCGGGAAACUUCUCCCCGGGAAGCCCCUGCAUCUGGCUGGGCAGCCCUAGGUCUUUCCUACAAAGUACAGUGGCCACUACAUAUUCUCUUCACCCCAGCUGUCCUGGAAAAAAAUAGACAAUUUUAAAAACCAAACAGAAUGGGACUGUCUUCUGCAAGCCUACCUACAAACAGGUACAAUGUUGUUUUUAAGUACUUACUGAGUGUGCGCCGGGUGCAAGCUGAGCUGCAGCACUGCUGGGCCCUACAAAUGCAGCGCAAGCACCUCAAGUCGAACCAGACUGAUGCAAUCAAGUGGCGCCUAAGAAAUCACAUGGCAUUUUUGGUGGAUAAUCUUCAGUACUAUCUCCAGGUAGAUGUGUUGGAGUCUCAGUUCUCCCAGCUGCUUCAUCAGAUCAAUUCUACCCGAGACUUUGAAAGCAYCCGAUUGGCUCAUGACCACUUCCUGAGCAAUUUGCUGGCUCAAUCCUYUAUCCUAUUGAAACCUGUGUUUCACUGCCUGAAUGAAAUCCUAGAUCUCUGUCACAGUUUUUGUUCGCUGGUCAGUCAGAACCUAGGCCCACUGGAUGAGCGUGGAGCCGCCCAGCUGAGCAUUCUCGUGAAGGGCUYUAGCCGCCAGUCUUCACUCCUGUUCAAGAUUCUCUCCAGUGUUCGGAAUCAUCAGAUCAACUCAGAUUUGGCUCAACUACUGUUACGACUAGAUUAUAACAAAUACUAUACCCAGGCUGGUGGAACUCUGGGCAGUUUCGGGAUGUGAAAAUUUCUGGCUCAUAAAUUGAAAUAACAGCCACGUUCCCAAGGUUGUAACAGAAGAUUCAAAACAYCCCAUUCUAGCCACACACAAAUAAAUAUCUGCGGCUUA
Sequence (MODOMICS CODE ENCODING)	AUGGAAUCUACCUGCGGGCCUUCUGCACAGGGCUGGAUUCUGUUUUGCAGCCUUAUCGCCAAGCACUGCUUGAUUUGGAACAAGAGUUCCUGGGUGAUCCCCAUCUCUCCAUAUCACAUGUCAACUACUUCCUAGACCAGUUCCAGCUUCUUUUUCCCUCUGUGAUGGUUGUAGUAGAACAAAUUAAAAGUCAAAAGAUUCAUGGUUGUCAAAUCCUGGAAACAGUCUACAAACACAGCUGUGGGGGGUUGCCUCCUGUUCGAAGUGCACUGGAAAAAAUCCUGGCCGUUUGUCAUGGGGUCAUGUAUAA2000000006ACAGCUCUCAGCCUGGAUGCUCCAUGGACUCCUCUUGGACCAGCAUGAAGAAUUCU2000000009UUAUCAAACAGGGGCCAUCUUCUGGUAAUGUCAGUGCCCAGCCAGAAGAGGACGAGGAGGAUCUGGGCAUUGGGGGACUGACAGGAAAACAACUGAGAGAACUGCAGGACUUGCGCCUGAUUGAGGAAGAGAACAUGCUGGCACCAUCUCUGAAGCAGUUUUCCCUACGAGUGGAGAUUUUGCCAUCCUACAUUCCAGUGAGGGUUGCUGAAAAAAUCCUAUUUGUUGGAGAAUCUGUCCAGAUGUUUGAGAAUCAAAAUGUGAACCUGACUAGAAAAGGAUCCAUUUUGAAAAACCAGGAAG2000000006ACACUUUUGCUGCAGAGCUGCACCGUCUCAAGCAGCAGCCACUCUUCAGCUUGGUGGACUUUGAACAGGUGGUGGAUCGCAUUCGCAGCACUGUGGCUGAGCAUCUCUGGAAGUUGAUGGUAGAAGAAUCCGAUUUACUGGGUCAGCUGAAGAUCAUUAAAGACUUUUACCUUCUGGGACGUGGAGAACUGUUUCAGGCCUUCAUUGACACAGCUCAACACAUGUUGAAAACACCACCCACUGCAGUAACUGAGCAUGAUGUGAAUGUGGCCUUUCAACAGUCAGCACACAAGGUAUUGCUAGAUGAUGACAACCUUCUCCCUCUGUUGCACUUGACAAUCGAGUAUCACGGAAAGGAGCACAAAGCAGAUGCUACUCAGGCAAGAGAAGGGCCUUCUCGGGAAACUUCUCCCCGGGAAGCCCCUGCAUCUGGCUGGGCAGCCCUAGGUCUUUCCUACAAAGUACAGUGGCCACUACAUAUUCUCUUCACCCCAGCUGUCCUGGAAAAAAAUAGACAAUUUUAAAAACCAAACAGAAUGGGACUGUCUUCUGCAAGCCUACCUACAAACAGGUACAAUGUUGUUUUUAAGUACUUACUGAGUGUGCGCCGGGUGCAAGCUGAGCUGCAGCACUGCUGGGCCCUACAAAUGCAGCGCAAGCACCUCAAGUCGAACCAGACUGAUGCAAUCAAGUGGCGCCUAAGAAAUCACAUGGCAUUUUUGGUGGAUAAUCUUCAGUACUAUCUCCAGGUAGAUGUGUUGGAGUCUCAGUUCUCCCAGCUGCUUCAUCAGAUCAAUUCUACCCGAGACUUUGAAAGCA2000000009UCCGAUUGGCUCAUGACCACUUCCUGAGCAAUUUGCUGGCUCAAUCCU2000000009UUAUCCUAUUGAAACCUGUGUUUCACUGCCUGAAUGAAAUCCUAGAUCUCUGUCACAGUUUUUGUUCGCUGGUCAGUCAGAACCUAGGCCCACUGGAUGAGCGUGGAGCCGCCCAGCUGAGCAUUCUCGUGAAGGGCU2000000009UUAGCCGCCAGUCUUCACUCCUGUUCAAGAUUCUCUCCAGUGUUCGGAAUCAUCAGAUCAACUCAGAUUUGGCUCAACUACUGUUACGACUAGAUUAUAACAAAUACUAUACCCAGGCUGGUGGAACUCUGGGCAGUUUCGGGAUGUGAAAAUUUCUGGCUCAUAAAUUGAAAUAACAGCCACGUUCCCAAGGUUGUAACAGAAGAUUCAAAACA2000000009UCCCAUUCUAGCCACACACAAAUAAAUAUCUGCGGCUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	311	367	670	1489	1537	1675	1890
Modification Positions	m6A	Y	m6A	Y	Y	Y	Y
Genomic Coordinates	15:43383336:+	15:43383392:+	15:43386230:+	15:43401786:+	15:43401834:+	15:43404417:+	15:43405281:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8