General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000560049
Gene ID:	ENSG00000179523
Gene Name:	EIF3J-DT
Sequence (UNICHARACTER ENCODING)	CAGAGGGAGGGGCACAGGGGGCUGAGGAGUGCUGGGUCGGGCUUCCAGCUCCCUACAACGCAGACCAGUACUGGAGUUCGUGGUGCUGGAAGACCGCCGCCCGACUCUGGGCCCCGGGUAGGAAACAЖCAAUUUCGGACCUCCUGGGGUCUAUGCUAGGUAUGAGGUGUAUCUUUGCCCUCCAUCAAGUAGCAAAGAUGGЖCAUGUAAACAAAUUUCGACACUGUGAUGACUGCCACAAAAAGCAGCAUUAUGAGGUUGAAUGUAAAAGGAUAACCUUAGCGGCGGCGGGGGCCGGAGGAUGAAGGAAGGCUUCCUGAGGUAGGCGCUGGUUGAAACUGAAGUUGGAGAGAGCAAGUGGCAUUUGCUGAAGUGCAUUUCCGGUAGAAAACUCCAGUGGUCCCUCACCUGACUGAGUGGCGCAGUCAGAGAUAAAUGGAACAGAGUCUACAAAUAAACAUUUUAUAAAGAUGAUCCUUCAAUACAUAUUCUACAGCCCAGUUAAAAUGUGAGAGGCCAUGAUCUACAGACAGCCAUUUAUAAAGGUGGAUCAGGGCCGGЖCACGGUGGCUCAACGUCUGUAAUCCCGGCACUGUGGGAGGCCAAAGCGGGAGGAUCGCUUGAGCCCAGGAGUUCGAGACCAACCUGGCCAACAUGGUGAGACCCCAUCUUUACAAAAAAAUAUAUAUAUCCAGGCAUAGUGGUGUGCACCUGUGGUCCUGUGGUCCCAGCUACUCAGGAAGCUGAGGCAGUUGAGGCUGCAGUGAGCCACGUUCUGGCCACUACACUCCAGCCUGGGCAUCAAAGUGACAAGACCAAAAAAAAAAAAAAAUGUGGAUUGGAAGGAGGCAAGAAAGAAGUCAGGAAAAGGGUGGAAUGUAAGUCCCUAAGGЖCACAAUCUUACUCACAAUUGUAUCUCCAACAUUUGGCAUAAUGCCUAAUACGUAAGUAUUUUAUGAAUUAAUUAAACGAGAЖCACAAGCCUAAAUUAAGGCAAUGGCAAUGGAGAAGAAGAAACCAACUUGAGAAAUAUUUAAAGGUCAUUGUCAAUGGAЖCUUAGUGЖCUUUAAUGGUUAAUUUUAUCUAUCAACUUGGCUAGGCGAUGCUACCCAUGUUACUCAGUUUUUGGUCAAACACUAGUCUAGUUGUUGCUAUGAAUUGUAUUUGUUAGAUGUGAUUAACAUUUAAAUCAGCAGЖCUUUGAUUAAAGUACAUUACCCUCUAUAAUGAGGGUGGGCCGCAUCCGGUCAGUUCAAAUUAAAACGAGACCCUUAAGAAGAAGCAAUUCAGCCUCCAGACUGCAGCGUCAAAUCUCCCUGGGUCUCCAGGCUGUUUGUCUGCCCUGCAGAUUUCAGACUUGCCAGCUCCCAGAAUAAUGUGAGCCAAUUCCUUAAAAUAAAUCUCUUUCUGCAUAUACAC
Sequence (SHORT NAMES ENCODING)	CAGAGGGAGGGGCACAGGGGGCUGAGGAGUGCUGGGUCGGGCUUCCAGCUCCCUACAACGCAGACCAGUACUGGAGUUCGUGGUGCUGGAAGACCGCCGCCCGACUCUGGGCCCCGGGUAGGAAACAm6ACAAUUUCGGACCUCCUGGGGUCUAUGCUAGGUAUGAGGUGUAUCUUUGCCCUCCAUCAAGUAGCAAAGAUGGm6ACAUGUAAACAAAUUUCGACACUGUGAUGACUGCCACAAAAAGCAGCAUUAUGAGGUUGAAUGUAAAAGGAUAACCUUAGCGGCGGCGGGGGCCGGAGGAUGAAGGAAGGCUUCCUGAGGUAGGCGCUGGUUGAAACUGAAGUUGGAGAGAGCAAGUGGCAUUUGCUGAAGUGCAUUUCCGGUAGAAAACUCCAGUGGUCCCUCACCUGACUGAGUGGCGCAGUCAGAGAUAAAUGGAACAGAGUCUACAAAUAAACAUUUUAUAAAGAUGAUCCUUCAAUACAUAUUCUACAGCCCAGUUAAAAUGUGAGAGGCCAUGAUCUACAGACAGCCAUUUAUAAAGGUGGAUCAGGGCCGGm6ACACGGUGGCUCAACGUCUGUAAUCCCGGCACUGUGGGAGGCCAAAGCGGGAGGAUCGCUUGAGCCCAGGAGUUCGAGACCAACCUGGCCAACAUGGUGAGACCCCAUCUUUACAAAAAAAUAUAUAUAUCCAGGCAUAGUGGUGUGCACCUGUGGUCCUGUGGUCCCAGCUACUCAGGAAGCUGAGGCAGUUGAGGCUGCAGUGAGCCACGUUCUGGCCACUACACUCCAGCCUGGGCAUCAAAGUGACAAGACCAAAAAAAAAAAAAAAUGUGGAUUGGAAGGAGGCAAGAAAGAAGUCAGGAAAAGGGUGGAAUGUAAGUCCCUAAGGm6ACACAAUCUUACUCACAAUUGUAUCUCCAACAUUUGGCAUAAUGCCUAAUACGUAAGUAUUUUAUGAAUUAAUUAAACGAGAm6ACACAAGCCUAAAUUAAGGCAAUGGCAAUGGAGAAGAAGAAACCAACUUGAGAAAUAUUUAAAGGUCAUUGUCAAUGGAm6ACUUAGUGm6ACUUUAAUGGUUAAUUUUAUCUAUCAACUUGGCUAGGCGAUGCUACCCAUGUUACUCAGUUUUUGGUCAAACACUAGUCUAGUUGUUGCUAUGAAUUGUAUUUGUUAGAUGUGAUUAACAUUUAAAUCAGCAGm6ACUUUGAUUAAAGUACAUUACCCUCUAUAAUGAGGGUGGGCCGCAUCCGGUCAGUUCAAAUUAAAACGAGACCCUUAAGAAGAAGCAAUUCAGCCUCCAGACUGCAGCGUCAAAUCUCCCUGGGUCUCCAGGCUGUUUGUCUGCCCUGCAGAUUUCAGACUUGCCAGCUCCCAGAAUAAUGUGAGCCAAUUCCUUAAAAUAAAUCUCUUUCUGCAUAUACAC
Sequence (MODOMICS CODE ENCODING)	CAGAGGGAGGGGCACAGGGGGCUGAGGAGUGCUGGGUCGGGCUUCCAGCUCCCUACAACGCAGACCAGUACUGGAGUUCGUGGUGCUGGAAGACCGCCGCCCGACUCUGGGCCCCGGGUAGGAAACA2000000006ACAAUUUCGGACCUCCUGGGGUCUAUGCUAGGUAUGAGGUGUAUCUUUGCCCUCCAUCAAGUAGCAAAGAUGG2000000006ACAUGUAAACAAAUUUCGACACUGUGAUGACUGCCACAAAAAGCAGCAUUAUGAGGUUGAAUGUAAAAGGAUAACCUUAGCGGCGGCGGGGGCCGGAGGAUGAAGGAAGGCUUCCUGAGGUAGGCGCUGGUUGAAACUGAAGUUGGAGAGAGCAAGUGGCAUUUGCUGAAGUGCAUUUCCGGUAGAAAACUCCAGUGGUCCCUCACCUGACUGAGUGGCGCAGUCAGAGAUAAAUGGAACAGAGUCUACAAAUAAACAUUUUAUAAAGAUGAUCCUUCAAUACAUAUUCUACAGCCCAGUUAAAAUGUGAGAGGCCAUGAUCUACAGACAGCCAUUUAUAAAGGUGGAUCAGGGCCGG2000000006ACACGGUGGCUCAACGUCUGUAAUCCCGGCACUGUGGGAGGCCAAAGCGGGAGGAUCGCUUGAGCCCAGGAGUUCGAGACCAACCUGGCCAACAUGGUGAGACCCCAUCUUUACAAAAAAAUAUAUAUAUCCAGGCAUAGUGGUGUGCACCUGUGGUCCUGUGGUCCCAGCUACUCAGGAAGCUGAGGCAGUUGAGGCUGCAGUGAGCCACGUUCUGGCCACUACACUCCAGCCUGGGCAUCAAAGUGACAAGACCAAAAAAAAAAAAAAAUGUGGAUUGGAAGGAGGCAAGAAAGAAGUCAGGAAAAGGGUGGAAUGUAAGUCCCUAAGG2000000006ACACAAUCUUACUCACAAUUGUAUCUCCAACAUUUGGCAUAAUGCCUAAUACGUAAGUAUUUUAUGAAUUAAUUAAACGAGA2000000006ACACAAGCCUAAAUUAAGGCAAUGGCAAUGGAGAAGAAGAAACCAACUUGAGAAAUAUUUAAAGGUCAUUGUCAAUGGA2000000006ACUUAGUG2000000006ACUUUAAUGGUUAAUUUUAUCUAUCAACUUGGCUAGGCGAUGCUACCCAUGUUACUCAGUUUUUGGUCAAACACUAGUCUAGUUGUUGCUAUGAAUUGUAUUUGUUAGAUGUGAUUAACAUUUAAAUCAGCAG2000000006ACUUUGAUUAAAGUACAUUACCCUCUAUAAUGAGGGUGGGCCGCAUCCGGUCAGUUCAAAUUAAAACGAGACCCUUAAGAAGAAGCAAUUCAGCCUCCAGACUGCAGCGUCAAAUCUCCCUGGGUCUCCAGGCUGUUUGUCUGCCCUGCAGAUUUCAGACUUGCCAGCUCCCAGAAUAAUGUGAGCCAAUUCCUUAAAAUAAAUCUCUUUCUGCAUAUACAC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	128	201	559	890	972	1051	1059	1192
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	15:44536357:-	15:44536284:-	15:44535358:-	15:44535027:-	15:44534945:-	15:44534866:-	15:44534858:-	15:44534725:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi	5FhTyQVy2tKW 6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	aivdrAsbdKEU msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 BtsJQJ3DteUq	Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq	BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq	BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq	BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq