General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000559554
Gene ID:	ENSG00000169684
Gene Name:	CHRNA5
Sequence (UNICHARACTER ENCODING)	CGGGAGCUGUGGCGCGGAGCGGCCCCUCUGCUGCGUCUGCCCUCGUUUUGUCUCACGACUCACACUCAGUGCUCCAUUCCCCAAGAGUUCGCGUUCCCCGCGCGGCGGUCGAGAGGCGGCUGCCCGCGGUCCCGCGCGGGCGCGGGGCGAUGGCGGCGCGGGGGUCAGGGCCCCGCGCGCUCCGCCUGCUGCUCUUGGUCCAGCUGGUCGCGGGGCGCUGCGGUCUAGCGGGCGCGGCGGGCGGCGCGCAGAGAGGAUUAUCUGAACCUUCUUCUAUUGCAAAACAUGAAGAUAGUUUGCUUAAGGAUUUAUUUCAAGACUACGAAAGAUGGGUUCGUCCUGUGGAACACCUGAAUGACAAAAUAAAAAUAAAAUUUGGACUUGCAAUAUCUCAAUUGGUGGAUGUGGAUGAGAAAAAUCAGUUAAUGACAACAAACGUCUGGUUGAAACAGGAAUGGAUAGAUGUAAAAUUAAGAUGGAACCCUGAUGACUAUGGUGGAAUAAAAGUUAUACGUGUUCCUUCAGACUCUGUCUGGACACCAGACAUCGUUUUGUUUGAUAAUGCAGAUGGACGUUUUGAAGGGACCAGUACGAAAЖCAGUCAUCAGGUUGUUGAAGAUUGGAAAUUCAUAGCCCAGGUUCUUGAUCGGAUGUUUCUGUGGЖCUUUUCUUUUCGUUUCAAUUGUUGGAUCUCUUGGGCUUUUUGUUCCUGUUAUUUAUAAAUGGGCAAAUAUAUUAAUACCAGUUCAUAUUGGAAAUGCAAAUAAGUGAAGCCUCCCAAGGGЖCUGAAGUAUACAUUUAGUUAЖCACACAUAUAUCUGAUGGCACCUAUAAAAUUAUGAAAAUGUAAGUUAUGUGUUAAAUUUAGUGCAAGCUPUAЖCAGACUAAGUUGCUAACCUCAAUUUAUGUUAACAGAUGAUCCAUPUGAACAGUUGGCUGUAUGACUGAAGUAAUAACUGAUGAGAUACAUUUGAUCUUGUAAAAAUAGCAAAAUAUUAUCUGAACUGGACUAGUGAAAAAUCUAGUAUUUGUAUCCUGGCAAAUAAUACUAAUU
Sequence (SHORT NAMES ENCODING)	CGGGAGCUGUGGCGCGGAGCGGCCCCUCUGCUGCGUCUGCCCUCGUUUUGUCUCACGACUCACACUCAGUGCUCCAUUCCCCAAGAGUUCGCGUUCCCCGCGCGGCGGUCGAGAGGCGGCUGCCCGCGGUCCCGCGCGGGCGCGGGGCGAUGGCGGCGCGGGGGUCAGGGCCCCGCGCGCUCCGCCUGCUGCUCUUGGUCCAGCUGGUCGCGGGGCGCUGCGGUCUAGCGGGCGCGGCGGGCGGCGCGCAGAGAGGAUUAUCUGAACCUUCUUCUAUUGCAAAACAUGAAGAUAGUUUGCUUAAGGAUUUAUUUCAAGACUACGAAAGAUGGGUUCGUCCUGUGGAACACCUGAAUGACAAAAUAAAAAUAAAAUUUGGACUUGCAAUAUCUCAAUUGGUGGAUGUGGAUGAGAAAAAUCAGUUAAUGACAACAAACGUCUGGUUGAAACAGGAAUGGAUAGAUGUAAAAUUAAGAUGGAACCCUGAUGACUAUGGUGGAAUAAAAGUUAUACGUGUUCCUUCAGACUCUGUCUGGACACCAGACAUCGUUUUGUUUGAUAAUGCAGAUGGACGUUUUGAAGGGACCAGUACGAAAm6ACAGUCAUCAGGUUGUUGAAGAUUGGAAAUUCAUAGCCCAGGUUCUUGAUCGGAUGUUUCUGUGGm6ACUUUUCUUUUCGUUUCAAUUGUUGGAUCUCUUGGGCUUUUUGUUCCUGUUAUUUAUAAAUGGGCAAAUAUAUUAAUACCAGUUCAUAUUGGAAAUGCAAAUAAGUGAAGCCUCCCAAGGGm6ACUGAAGUAUACAUUUAGUUAm6ACACACAUAUAUCUGAUGGCACCUAUAAAAUUAUGAAAAUGUAAGUUAUGUGUUAAAUUUAGUGCAAGCUYUAm6ACAGACUAAGUUGCUAACCUCAAUUUAUGUUAACAGAUGAUCCAUYUGAACAGUUGGCUGUAUGACUGAAGUAAUAACUGAUGAGAUACAUUUGAUCUUGUAAAAAUAGCAAAAUAUUAUCUGAACUGGACUAGUGAAAAAUCUAGUAUUUGUAUCCUGGCAAAUAAUACUAAUU
Sequence (MODOMICS CODE ENCODING)	CGGGAGCUGUGGCGCGGAGCGGCCCCUCUGCUGCGUCUGCCCUCGUUUUGUCUCACGACUCACACUCAGUGCUCCAUUCCCCAAGAGUUCGCGUUCCCCGCGCGGCGGUCGAGAGGCGGCUGCCCGCGGUCCCGCGCGGGCGCGGGGCGAUGGCGGCGCGGGGGUCAGGGCCCCGCGCGCUCCGCCUGCUGCUCUUGGUCCAGCUGGUCGCGGGGCGCUGCGGUCUAGCGGGCGCGGCGGGCGGCGCGCAGAGAGGAUUAUCUGAACCUUCUUCUAUUGCAAAACAUGAAGAUAGUUUGCUUAAGGAUUUAUUUCAAGACUACGAAAGAUGGGUUCGUCCUGUGGAACACCUGAAUGACAAAAUAAAAAUAAAAUUUGGACUUGCAAUAUCUCAAUUGGUGGAUGUGGAUGAGAAAAAUCAGUUAAUGACAACAAACGUCUGGUUGAAACAGGAAUGGAUAGAUGUAAAAUUAAGAUGGAACCCUGAUGACUAUGGUGGAAUAAAAGUUAUACGUGUUCCUUCAGACUCUGUCUGGACACCAGACAUCGUUUUGUUUGAUAAUGCAGAUGGACGUUUUGAAGGGACCAGUACGAAA2000000006ACAGUCAUCAGGUUGUUGAAGAUUGGAAAUUCAUAGCCCAGGUUCUUGAUCGGAUGUUUCUGUGG2000000006ACUUUUCUUUUCGUUUCAAUUGUUGGAUCUCUUGGGCUUUUUGUUCCUGUUAUUUAUAAAUGGGCAAAUAUAUUAAUACCAGUUCAUAUUGGAAAUGCAAAUAAGUGAAGCCUCCCAAGGG2000000006ACUGAAGUAUACAUUUAGUUA2000000006ACACACAUAUAUCUGAUGGCACCUAUAAAAUUAUGAAAAUGUAAGUUAUGUGUUAAAUUUAGUGCAAGCU2000000009UUA2000000006ACAGACUAAGUUGCUAACCUCAAUUUAUGUUAACAGAUGAUCCAU2000000009UUGAACAGUUGGCUGUAUGACUGAAGUAAUAACUGAUGAGAUACAUUUGAUCUUGUAAAAAUAGCAAAAUAUUAUCUGAACUGGACUAGUGAAAAAUCUAGUAUUUGUAUCCUGGCAAAUAAUACUAAUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	597	662	783	804	874	877	922
Modification Positions	m6A	m6A	m6A	m6A	Y	m6A	Y
Genomic Coordinates	15:78589839:+	15:78593146:+	15:78593267:+	15:78593288:+	15:78593358:+	15:78593361:+	15:78593406:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv Ap2q43bQLNek gBgcfFQ5WN9C jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8