General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000395066
Gene ID:	ENSG00000179335
Gene Name:	CLK3
Sequence (UNICHARACTER ENCODING)	GGAAGCGGAAGAGGCGCUCGGAGCGGGGAGUGGGGCCUAGCUGCAGCCGGAGCCUGGGAGACGAUGCAUCACUGUAAGCGAUACCGCUCCCCUGAACCAGACCCGUACCUGAGCUACCGAUGGAAGAGGAGGAGGUCCUACAGUCGGGAACAUGAAGGGAGACUGCGAUACCCGUCCCGAAGGGAGCCUCCCCCACGAAGAUCUCGGUCCAGAAGCCAUGACCGCCUGCCCUACCAGAGGAGGUACCGGGAGCGCCGUGACAGCGAUACAUACCGGUGUGAAGAGCGGAGCCCAPCCUUUGGAGAGGACUACUAUGGACCUUCACGUUCUCGUCAUCGUCGGCGAUCGCGGGAGAGGGGGCCAUACCGGACCCGCAAGCAUGCCCACCACUGCCACAAACGCCGCACCAGGUCUUGUAGCAGCGCCUCCUCGAGAAGCCAACAGAGCAGUAAGCGCAGCAGCCGGAGUGUGGAAGAUGACAAGGAGGGUCACCUGGUGUGCCGGAUCGGCGAUUGGCUCCAAGAGCGAUAUGAGAUUGUGGGGAACCUGGGUGAAGGCACCUUUGGCAAGGUGGUGGAGUGCUUGGACCAUGCCAGAGGGAAGUCUCAGGUUGCCCUGAAGAUCAPCCGCAACGUGGGCAAGUACCGGGAGGCUGCCCGGCUAGAAAUCAACGUGCUCAAAAAAAUCAAGGAGAAGGACAAAGAAAACAAGUUCCUGUGUGUCUUGAUGUCUGACUGGUUCAACUUCCACGGUCACAUGUGCAUCGCCUUUGAGCUCCUGGGCAAGAACACCUUUGAGUUCCUGAAGGAGAAUAЖCUUCCAGCCUUACCCCCUACCACAUGUCCGGCACAUGGCCUACCAGCUCUGCCACGCCCUUAGAUUUCUGCAUGAGAAUCAGCUGACCCAUACAGACUUGAAACCAGAGAACAPCCUGUUUGUGAAUUCUGAGUUUGAAACCCUCUACAAUGAGCACAAGAGCUGUGAGGAGAAGUCAGUGAAGAACACCAGCAUCCGAGUGGCUGACUUUGGCAGUGCCACAUPUGACCAUGAGCACCACACCACCAUUGUGGCCACCCGUCACUAUCGCCCGCCUGAGGUGAUCCUUGAGCUGGGCUGGGCACAGCCCUGUGACGUCUGGAGCAUUGGCUGCAUUCUCUUUGAGUACUACCGGGGCUUCACACUCUUCCAGACCCACGAAAACCGAGAGCACCUGGUGAUGAUGGAGAAGAUCCUAGGGCCCAPCCCAUCACACAUGAUCCACCGUACCAGGAAGCAGAAAUAUUUCUACAAAGGGGGCCUAGUUUGGGAUGAGAЖCAGCUCUGACGGCCGGUAUGUGAAGGAGAACUGCAAACCUCUGAAGAGUUACAUGCUCCAAGACUCCCUGGAGCACGUGCAGCUGUUUGACCUGAUGAGGAGGAUGUUAGAAUPUGACCCUGCCCAGCGCAUCACACUGGCCGAGGCCCUGCUGCACCCCUUCUUUGCUGGCCUGACCCCUGAGGAGCGGUCCUUCCACACCAGCCGCAACCCAAGCAGAUGACAGGCACAGGCCACCGCAUGAGGAGAUGGAGGGCGGGACUGGGCCGCCCAGCCCCUUGACUCCAGCCUCGACCGCCAGGCCCCAGGCCAGAGCCACCCAAUGAЖCAGUGCAAUGUGAAGGAAGGCAGGAGCCUGCAGGGGAGCAGACUUGGUGCCCAGCUGCCAGAAAGCACAGAUUUGACCCAAGCUAUUUAUAUGUUAUAAAGUUAUAAUAAAGUGUUUCUUACUGUUUGUAACCCCUGGUACCAGUGUGUCCAUCUCCAGGCUCCUUGCCUUCCCCUUACCUGACCUUAUUAAUAAAGUCUUUCUUAGCAGUUCA
Sequence (SHORT NAMES ENCODING)	GGAAGCGGAAGAGGCGCUCGGAGCGGGGAGUGGGGCCUAGCUGCAGCCGGAGCCUGGGAGACGAUGCAUCACUGUAAGCGAUACCGCUCCCCUGAACCAGACCCGUACCUGAGCUACCGAUGGAAGAGGAGGAGGUCCUACAGUCGGGAACAUGAAGGGAGACUGCGAUACCCGUCCCGAAGGGAGCCUCCCCCACGAAGAUCUCGGUCCAGAAGCCAUGACCGCCUGCCCUACCAGAGGAGGUACCGGGAGCGCCGUGACAGCGAUACAUACCGGUGUGAAGAGCGGAGCCCAYCCUUUGGAGAGGACUACUAUGGACCUUCACGUUCUCGUCAUCGUCGGCGAUCGCGGGAGAGGGGGCCAUACCGGACCCGCAAGCAUGCCCACCACUGCCACAAACGCCGCACCAGGUCUUGUAGCAGCGCCUCCUCGAGAAGCCAACAGAGCAGUAAGCGCAGCAGCCGGAGUGUGGAAGAUGACAAGGAGGGUCACCUGGUGUGCCGGAUCGGCGAUUGGCUCCAAGAGCGAUAUGAGAUUGUGGGGAACCUGGGUGAAGGCACCUUUGGCAAGGUGGUGGAGUGCUUGGACCAUGCCAGAGGGAAGUCUCAGGUUGCCCUGAAGAUCAYCCGCAACGUGGGCAAGUACCGGGAGGCUGCCCGGCUAGAAAUCAACGUGCUCAAAAAAAUCAAGGAGAAGGACAAAGAAAACAAGUUCCUGUGUGUCUUGAUGUCUGACUGGUUCAACUUCCACGGUCACAUGUGCAUCGCCUUUGAGCUCCUGGGCAAGAACACCUUUGAGUUCCUGAAGGAGAAUAm6ACUUCCAGCCUUACCCCCUACCACAUGUCCGGCACAUGGCCUACCAGCUCUGCCACGCCCUUAGAUUUCUGCAUGAGAAUCAGCUGACCCAUACAGACUUGAAACCAGAGAACAYCCUGUUUGUGAAUUCUGAGUUUGAAACCCUCUACAAUGAGCACAAGAGCUGUGAGGAGAAGUCAGUGAAGAACACCAGCAUCCGAGUGGCUGACUUUGGCAGUGCCACAUYUGACCAUGAGCACCACACCACCAUUGUGGCCACCCGUCACUAUCGCCCGCCUGAGGUGAUCCUUGAGCUGGGCUGGGCACAGCCCUGUGACGUCUGGAGCAUUGGCUGCAUUCUCUUUGAGUACUACCGGGGCUUCACACUCUUCCAGACCCACGAAAACCGAGAGCACCUGGUGAUGAUGGAGAAGAUCCUAGGGCCCAYCCCAUCACACAUGAUCCACCGUACCAGGAAGCAGAAAUAUUUCUACAAAGGGGGCCUAGUUUGGGAUGAGAm6ACAGCUCUGACGGCCGGUAUGUGAAGGAGAACUGCAAACCUCUGAAGAGUUACAUGCUCCAAGACUCCCUGGAGCACGUGCAGCUGUUUGACCUGAUGAGGAGGAUGUUAGAAUYUGACCCUGCCCAGCGCAUCACACUGGCCGAGGCCCUGCUGCACCCCUUCUUUGCUGGCCUGACCCCUGAGGAGCGGUCCUUCCACACCAGCCGCAACCCAAGCAGAUGACAGGCACAGGCCACCGCAUGAGGAGAUGGAGGGCGGGACUGGGCCGCCCAGCCCCUUGACUCCAGCCUCGACCGCCAGGCCCCAGGCCAGAGCCACCCAAUGAm6ACAGUGCAAUGUGAAGGAAGGCAGGAGCCUGCAGGGGAGCAGACUUGGUGCCCAGCUGCCAGAAAGCACAGAUUUGACCCAAGCUAUUUAUAUGUUAUAAAGUUAUAAUAAAGUGUUUCUUACUGUUUGUAACCCCUGGUACCAGUGUGUCCAUCUCCAGGCUCCUUGCCUUCCCCUUACCUGACCUUAUUAAUAAAGUCUUUCUUAGCAGUUCA
Sequence (MODOMICS CODE ENCODING)	GGAAGCGGAAGAGGCGCUCGGAGCGGGGAGUGGGGCCUAGCUGCAGCCGGAGCCUGGGAGACGAUGCAUCACUGUAAGCGAUACCGCUCCCCUGAACCAGACCCGUACCUGAGCUACCGAUGGAAGAGGAGGAGGUCCUACAGUCGGGAACAUGAAGGGAGACUGCGAUACCCGUCCCGAAGGGAGCCUCCCCCACGAAGAUCUCGGUCCAGAAGCCAUGACCGCCUGCCCUACCAGAGGAGGUACCGGGAGCGCCGUGACAGCGAUACAUACCGGUGUGAAGAGCGGAGCCCA2000000009UCCUUUGGAGAGGACUACUAUGGACCUUCACGUUCUCGUCAUCGUCGGCGAUCGCGGGAGAGGGGGCCAUACCGGACCCGCAAGCAUGCCCACCACUGCCACAAACGCCGCACCAGGUCUUGUAGCAGCGCCUCCUCGAGAAGCCAACAGAGCAGUAAGCGCAGCAGCCGGAGUGUGGAAGAUGACAAGGAGGGUCACCUGGUGUGCCGGAUCGGCGAUUGGCUCCAAGAGCGAUAUGAGAUUGUGGGGAACCUGGGUGAAGGCACCUUUGGCAAGGUGGUGGAGUGCUUGGACCAUGCCAGAGGGAAGUCUCAGGUUGCCCUGAAGAUCA2000000009UCCGCAACGUGGGCAAGUACCGGGAGGCUGCCCGGCUAGAAAUCAACGUGCUCAAAAAAAUCAAGGAGAAGGACAAAGAAAACAAGUUCCUGUGUGUCUUGAUGUCUGACUGGUUCAACUUCCACGGUCACAUGUGCAUCGCCUUUGAGCUCCUGGGCAAGAACACCUUUGAGUUCCUGAAGGAGAAUA2000000006ACUUCCAGCCUUACCCCCUACCACAUGUCCGGCACAUGGCCUACCAGCUCUGCCACGCCCUUAGAUUUCUGCAUGAGAAUCAGCUGACCCAUACAGACUUGAAACCAGAGAACA2000000009UCCUGUUUGUGAAUUCUGAGUUUGAAACCCUCUACAAUGAGCACAAGAGCUGUGAGGAGAAGUCAGUGAAGAACACCAGCAUCCGAGUGGCUGACUUUGGCAGUGCCACAU2000000009UUGACCAUGAGCACCACACCACCAUUGUGGCCACCCGUCACUAUCGCCCGCCUGAGGUGAUCCUUGAGCUGGGCUGGGCACAGCCCUGUGACGUCUGGAGCAUUGGCUGCAUUCUCUUUGAGUACUACCGGGGCUUCACACUCUUCCAGACCCACGAAAACCGAGAGCACCUGGUGAUGAUGGAGAAGAUCCUAGGGCCCA2000000009UCCCAUCACACAUGAUCCACCGUACCAGGAAGCAGAAAUAUUUCUACAAAGGGGGCCUAGUUUGGGAUGAGA2000000006ACAGCUCUGACGGCCGGUAUGUGAAGGAGAACUGCAAACCUCUGAAGAGUUACAUGCUCCAAGACUCCCUGGAGCACGUGCAGCUGUUUGACCUGAUGAGGAGGAUGUUAGAAU2000000009UUGACCCUGCCCAGCGCAUCACACUGGCCGAGGCCCUGCUGCACCCCUUCUUUGCUGGCCUGACCCCUGAGGAGCGGUCCUUCCACACCAGCCGCAACCCAAGCAGAUGACAGGCACAGGCCACCGCAUGAGGAGAUGGAGGGCGGGACUGGGCCGCCCAGCCCCUUGACUCCAGCCUCGACCGCCAGGCCCCAGGCCAGAGCCACCCAAUGA2000000006ACAGUGCAAUGUGAAGGAAGGCAGGAGCCUGCAGGGGAGCAGACUUGGUGCCCAGCUGCCAGAAAGCACAGAUUUGACCCAAGCUAUUUAUAUGUUAUAAAGUUAUAAUAAAGUGUUUCUUACUGUUUGUAACCCCUGGUACCAGUGUGUCCAUCUCCAGGCUCCUUGCCUUCCCCUUACCUGACCUUAUUAAUAAAGUCUUUCUUAGCAGUUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	295	626	815	929	1040	1241	1313	1427	1640
Modification Positions	Y	Y	m6A	Y	Y	Y	m6A	Y	m6A
Genomic Coordinates	15:74620088:+	15:74624931:+	15:74625903:+	15:74627400:+	15:74627603:+	15:74628656:+	15:74628986:+	15:74629774:+	15:74629987:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8