General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000557750
Gene ID:	ENSG00000166965
Gene Name:	RCCD1
Sequence (UNICHARACTER ENCODING)	GGCCCGAGGGGAAGCGCCUUGGCCUGGAGUGCUACCUUGGGCAGGGCAGGCUUUAGUUGUCCCCAGGAGCGGAUGCGAUGGGGAGGAGAGUUUGGAUGGAUGCAGGGGCUUCACAGUCUGUUUCAUGUGUCCCCUUGAUCUCUUUCAGAGACUGGGGAUAUUUAUAUCUGGGGCUGGAAUGAAUCAGGGCAGCUGGCCCUGCCCACCAGGAACCUGGCAGAGGAUGGAGAGACUGUCGCAAGGGAAGGUGAGGGUCAUCUCGGCUCCCACAGCCGUCUCCCCAGGAUGUGGCUGUCAUUCCUAACUCCUGGCUGUAUGCUGGCCUCAGAGCUACACUGCUCAGAUGGAGCAUGUGAGCCCCUUAUGGGAGGGAGCAUUGGCAAGGCUGAUGCCGGUCUUGGCACAACACACUUGUGCAGCAGUGCCAGCCCUGCCUGCAGAAUGUAGGGGUUGGGAGCACCAGCUUUGGAGCUAGGCAGUCGUGUACCUCAGAGCUGUUGUGGCAAUAAGUGACUGCAUGAAUAAGAUUUAGCUCAGGGCUCAGUUGGUGUUCACAUCAUUAUUAUCAUUCUGAAGCCACAGAACUGAAUGAAGAUGGUUCUCAGGUGAAGAGAACGGGUGGGGCUGAGGAUGGAGCCCCUGCCCCCUUCAUAGCUGUCCAGCCCUUCCCGGCAUUACUGGAUCUCCCCAUGGGCUCAGAUGCAGUCAAGGCCAGCUGUGGAUCCCGGCACACAGCUGUGGUGACACGAACAGGGGAGCUCUACACCUGGGGCUGGGGUAAGUAAAAGGЖUUGUUUUUGUGACCCUGAAACCAAGGAGAAGAAAGACCUGGGAGUACAGGGCAGGUGACAAAGCCAACAAGЖCUGGAGGAAGCAGGGGCCUCGGCCAGGUCACUGGGAGGAACAGGЖCUGCUCCCUCCCUGGGGUUGGAACAGACAUAGGCGCGCUCAGUCCGAGGCCAGACAGGGGAGACAUGGAGAGGAUAUCGGUACCACCCGCCUACCUCUCUGAAAGЖCUGUCUUAAGGGAGUAUCCAACCAGCACUUACAAAGCAGCUUUUUGUGGAUGUGЖCACUGGGUGGAGAAAAAGAUUCGAUGGAAGUGUGUGCUCUGAЖCAUCUUAGCUUGGAUAGCAGGGAAGUCUGGAGGAGCGUCUUGCCUGGAGUGGCUGGUCGCCACUAGCCUCUUGGGGAUCCCCAAGGUUGCCUGGCUCUGGGUCUCUUGGAUUCACAGAGCAGUGGGGCAUAAUCCCAGCACUUCAUUUGAUAGUCUGGGCCCCUUCCUGGAGGGAAAGCAGCAGCAAGACCCAGUGGAGЖCGAUGGCAAAGGGGCUGAUUUCACUPUAGGUAAAUAUGGЖCAGCUGGGCCACGAGGACACCACCAGCUUGGAUCGGCCUCGCCGUGUGGAAUACUUUGUAGAUAAGCAACUCCAAGUAAAGGCUGUCACCUGUGGGCCGUGGAACACCUACGUGUAUGCUGUGGAGAAAGGGAAGAGCUGACAUGUGUACGUAUAUGUAUAUGCAACACCUGUGAGЖCCCCCAUUCAGGUCAAGGAAAACCAUUGCCUGCACCCCAAGGGCCCCAUAUUUGCCCCUCCCCAUCACAGUCCUGCCCUUCACCCUCAAGCACGGUCCUAAACUUGUCUGCACUPUAGAAACACCUGGAGAGCAUUGAAAЖCUCUGCUGCCUAAGGUCAGCAUCAAUC
Sequence (SHORT NAMES ENCODING)	GGCCCGAGGGGAAGCGCCUUGGCCUGGAGUGCUACCUUGGGCAGGGCAGGCUUUAGUUGUCCCCAGGAGCGGAUGCGAUGGGGAGGAGAGUUUGGAUGGAUGCAGGGGCUUCACAGUCUGUUUCAUGUGUCCCCUUGAUCUCUUUCAGAGACUGGGGAUAUUUAUAUCUGGGGCUGGAAUGAAUCAGGGCAGCUGGCCCUGCCCACCAGGAACCUGGCAGAGGAUGGAGAGACUGUCGCAAGGGAAGGUGAGGGUCAUCUCGGCUCCCACAGCCGUCUCCCCAGGAUGUGGCUGUCAUUCCUAACUCCUGGCUGUAUGCUGGCCUCAGAGCUACACUGCUCAGAUGGAGCAUGUGAGCCCCUUAUGGGAGGGAGCAUUGGCAAGGCUGAUGCCGGUCUUGGCACAACACACUUGUGCAGCAGUGCCAGCCCUGCCUGCAGAAUGUAGGGGUUGGGAGCACCAGCUUUGGAGCUAGGCAGUCGUGUACCUCAGAGCUGUUGUGGCAAUAAGUGACUGCAUGAAUAAGAUUUAGCUCAGGGCUCAGUUGGUGUUCACAUCAUUAUUAUCAUUCUGAAGCCACAGAACUGAAUGAAGAUGGUUCUCAGGUGAAGAGAACGGGUGGGGCUGAGGAUGGAGCCCCUGCCCCCUUCAUAGCUGUCCAGCCCUUCCCGGCAUUACUGGAUCUCCCCAUGGGCUCAGAUGCAGUCAAGGCCAGCUGUGGAUCCCGGCACACAGCUGUGGUGACACGAACAGGGGAGCUCUACACCUGGGGCUGGGGUAAGUAAAAGGm6AUUGUUUUUGUGACCCUGAAACCAAGGAGAAGAAAGACCUGGGAGUACAGGGCAGGUGACAAAGCCAACAAGm6ACUGGAGGAAGCAGGGGCCUCGGCCAGGUCACUGGGAGGAACAGGm6ACUGCUCCCUCCCUGGGGUUGGAACAGACAUAGGCGCGCUCAGUCCGAGGCCAGACAGGGGAGACAUGGAGAGGAUAUCGGUACCACCCGCCUACCUCUCUGAAAGm6ACUGUCUUAAGGGAGUAUCCAACCAGCACUUACAAAGCAGCUUUUUGUGGAUGUGm6ACACUGGGUGGAGAAAAAGAUUCGAUGGAAGUGUGUGCUCUGAm6ACAUCUUAGCUUGGAUAGCAGGGAAGUCUGGAGGAGCGUCUUGCCUGGAGUGGCUGGUCGCCACUAGCCUCUUGGGGAUCCCCAAGGUUGCCUGGCUCUGGGUCUCUUGGAUUCACAGAGCAGUGGGGCAUAAUCCCAGCACUUCAUUUGAUAGUCUGGGCCCCUUCCUGGAGGGAAAGCAGCAGCAAGACCCAGUGGAGm6ACGAUGGCAAAGGGGCUGAUUUCACUYUAGGUAAAUAUGGm6ACAGCUGGGCCACGAGGACACCACCAGCUUGGAUCGGCCUCGCCGUGUGGAAUACUUUGUAGAUAAGCAACUCCAAGUAAAGGCUGUCACCUGUGGGCCGUGGAACACCUACGUGUAUGCUGUGGAGAAAGGGAAGAGCUGACAUGUGUACGUAUAUGUAUAUGCAACACCUGUGAGm6ACCCCCAUUCAGGUCAAGGAAAACCAUUGCCUGCACCCCAAGGGCCCCAUAUUUGCCCCUCCCCAUCACAGUCCUGCCCUUCACCCUCAAGCACGGUCCUAAACUUGUCUGCACUYUAGAAACACCUGGAGAGCAUUGAAAm6ACUCUGCUGCCUAAGGUCAGCAUCAAUC
Sequence (MODOMICS CODE ENCODING)	GGCCCGAGGGGAAGCGCCUUGGCCUGGAGUGCUACCUUGGGCAGGGCAGGCUUUAGUUGUCCCCAGGAGCGGAUGCGAUGGGGAGGAGAGUUUGGAUGGAUGCAGGGGCUUCACAGUCUGUUUCAUGUGUCCCCUUGAUCUCUUUCAGAGACUGGGGAUAUUUAUAUCUGGGGCUGGAAUGAAUCAGGGCAGCUGGCCCUGCCCACCAGGAACCUGGCAGAGGAUGGAGAGACUGUCGCAAGGGAAGGUGAGGGUCAUCUCGGCUCCCACAGCCGUCUCCCCAGGAUGUGGCUGUCAUUCCUAACUCCUGGCUGUAUGCUGGCCUCAGAGCUACACUGCUCAGAUGGAGCAUGUGAGCCCCUUAUGGGAGGGAGCAUUGGCAAGGCUGAUGCCGGUCUUGGCACAACACACUUGUGCAGCAGUGCCAGCCCUGCCUGCAGAAUGUAGGGGUUGGGAGCACCAGCUUUGGAGCUAGGCAGUCGUGUACCUCAGAGCUGUUGUGGCAAUAAGUGACUGCAUGAAUAAGAUUUAGCUCAGGGCUCAGUUGGUGUUCACAUCAUUAUUAUCAUUCUGAAGCCACAGAACUGAAUGAAGAUGGUUCUCAGGUGAAGAGAACGGGUGGGGCUGAGGAUGGAGCCCCUGCCCCCUUCAUAGCUGUCCAGCCCUUCCCGGCAUUACUGGAUCUCCCCAUGGGCUCAGAUGCAGUCAAGGCCAGCUGUGGAUCCCGGCACACAGCUGUGGUGACACGAACAGGGGAGCUCUACACCUGGGGCUGGGGUAAGUAAAAGG2000000006AUUGUUUUUGUGACCCUGAAACCAAGGAGAAGAAAGACCUGGGAGUACAGGGCAGGUGACAAAGCCAACAAG2000000006ACUGGAGGAAGCAGGGGCCUCGGCCAGGUCACUGGGAGGAACAGG2000000006ACUGCUCCCUCCCUGGGGUUGGAACAGACAUAGGCGCGCUCAGUCCGAGGCCAGACAGGGGAGACAUGGAGAGGAUAUCGGUACCACCCGCCUACCUCUCUGAAAG2000000006ACUGUCUUAAGGGAGUAUCCAACCAGCACUUACAAAGCAGCUUUUUGUGGAUGUG2000000006ACACUGGGUGGAGAAAAAGAUUCGAUGGAAGUGUGUGCUCUGA2000000006ACAUCUUAGCUUGGAUAGCAGGGAAGUCUGGAGGAGCGUCUUGCCUGGAGUGGCUGGUCGCCACUAGCCUCUUGGGGAUCCCCAAGGUUGCCUGGCUCUGGGUCUCUUGGAUUCACAGAGCAGUGGGGCAUAAUCCCAGCACUUCAUUUGAUAGUCUGGGCCCCUUCCUGGAGGGAAAGCAGCAGCAAGACCCAGUGGAG2000000006ACGAUGGCAAAGGGGCUGAUUUCACU2000000009UUAGGUAAAUAUGG2000000006ACAGCUGGGCCACGAGGACACCACCAGCUUGGAUCGGCCUCGCCGUGUGGAAUACUUUGUAGAUAAGCAACUCCAAGUAAAGGCUGUCACCUGUGGGCCGUGGAACACCUACGUGUAUGCUGUGGAGAAAGGGAAGAGCUGACAUGUGUACGUAUAUGUAUAUGCAACACCUGUGAG2000000006ACCCCCAUUCAGGUCAAGGAAAACCAUUGCCUGCACCCCAAGGGCCCCAUAUUUGCCCCUCCCCAUCACAGUCCUGCCCUUCACCCUCAAGCACGGUCCUAAACUUGUCUGCACU2000000009UUAGAAACACCUGGAGAGCAUUGAAA2000000006ACUCUGCUGCCUAAGGUCAGCAUCAAUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	790	862	907	1013	1068	1111	1311	1337	1351	1528	1643	1669
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A	Y	m6A
Genomic Coordinates	15:90961067:+	15:90961139:+	15:90961184:+	15:90961290:+	15:90961345:+	15:90961388:+	15:90961588:+	15:90961614:+	15:90961628:+	15:90961805:+	15:90961920:+	15:90961946:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8