General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000678589
Gene ID:	ENSG00000135316
Gene Name:	SYNCRIP
Sequence (UNICHARACTER ENCODING)	ACCGGGAGCGCGCUCGGAGGCGAGUGGAACUGGAUCGGGUUUGCUGCCAGCGGCGUGAGCUUCGGCCGCCAUUUUACAACAGCUCCACUCGCGCCGGACACAGGGAGCAGCGAGCACGCGUUUCCCGCAACCCGAUACCAUCGGACAGGAUUUCUCCGCCUCAGCCCAACGGGGAGGGCUAGUUGCACAUAGUGAUUUAGAUGAAAGAGCUAUUGAAGCUPUAAAAGAAUUCAAUGAAGACGGUGCAUUGGCAGUUCUUCAACAGUUUAAAGЖCAGUGAUCUCUCUCAUGUUCAGAACAAAAGUGCCUUUUUAUGUGGAGUCAUGAAGACUUACAGGCAGAGAGAAAAACAAGGGACCAAAGUAGCAGAUUCUAGUAAAGGACCAGAUGAGGCAAAAAUUAAGGCACUCUUGGAAAGAACAGGCUACACACUUGAUGUGACCACUGGACAGAGGAAGUAUGGAGGACCACCUCCAGAUUCCGUUUAUUCAGGUCAGCAGCCUUCUGUUGGCACUGAGAUAUUUGUGGGAAAGAUCCCAAGAGAUCUAUUUGAGGAUGAACUUGUUCCAUUAUUUGAGAAAGCUGGACCUAUAUGGGAUCUUCGUCUAAUGAUGGAUCCACUCACUGGUCUCAAUAGAGGUUAUGCGUUUGUCACUUUUUGUACЖAAAGAAGCAGCUCAGGAGGCUGUUAAACUGUAUAAUAAUCAUGAAAUUCGUUCUGGAAAACAUAUUGGUGUCUGCAUCUCAGUUGCCAACAAUAGGCUUUUUGUGGGCUCUAUUCCUAAGAGUAAAACCAAGGAACAGAUUCUUGAAGAAUUUAGCAAAGUAACAGAGGGUCUUACAGACGUCAUUUUAUACCACCAACCGGAUGACAAGAAAAAAAACAGAGGCUUUUGCUUUCUUGAAUAUGAAGAUCACAAAACAGCUGCCCAGGUAAAAGUGCUGUUUGUACGCAACCUUGCCAAUACUGUAЖCAGAAGAGAUUUUAGAAAAGGCAUUUAGUCAGUUUGGGAAACUGGAACGAGUGAAGAAGUUAAAAGAUUAUGCGUUCAUUCAUUUUGAUGAGCGAGAUGGUGCUGUCAAGGCUAUGGAAGAAAUGAAUGGCAAAGACUUGGAGGGAGAAAAUAUUGAAAUUGUUUUUGCCAAGCCACCAGAUCAGAAAAGGAAAGAAAGAAAAGCUCAGAGGCAAGCAGCAAAAAAUCAAAUGUAUGACGAUUACUACUAUUAUGGUCCACCUCAUAUGCCCCCUCCAACAAGAGGUCGAGGGCGUGGAGGUAGAGGUGGUUAUGGAUAUCCPCCAGAUUAUUAUGGAUAUGAAGAUUAUUAUGAUUAUUAUGGUUAUGAUUACCAUAЖCUAUCGUGGUGGAUAUGAAGAUCCAUACUAUGGUUAUGAAGAUUUUCAAGUUGGAGCUAGAGGAAGGGGUGGUAGAGGAGCAAGGGGUGCUGCUCCAPCCAGAGGUCGUGGGGCUGCUCCUCCCCGCGGUAGAGCCGGUUAUUCACAGAGAGGAGGUCCUGGAUCAGCAAGAGGCGUUCGAGGUGCGAGAGGAGGUGCCCAACAACAAAGAGGCCGCGGGGUACGUGGUGCGAGGGGUGGCCGCGGUGGAAAUGUAGGAGGAAAGCGCAAAGCUGAUGGGUACAACCAGCCAGAUUCCAAGCGGCGCCAGACCAAUAAUCAGAЖCUGGGGCUCCCAACCCAUUGCUCAGCAACCGCUCCAAGGUGGUGAUCAUUCUGGUAЖCUAUGGUUACAAAUCUGAAAACCAGGAGUUUUAUCAGGAUACUUUUGGGCAACAGUGGAAGUAGAAЖCAGUAGGGCCUCUGUAAAAUUGGAG
Sequence (SHORT NAMES ENCODING)	ACCGGGAGCGCGCUCGGAGGCGAGUGGAACUGGAUCGGGUUUGCUGCCAGCGGCGUGAGCUUCGGCCGCCAUUUUACAACAGCUCCACUCGCGCCGGACACAGGGAGCAGCGAGCACGCGUUUCCCGCAACCCGAUACCAUCGGACAGGAUUUCUCCGCCUCAGCCCAACGGGGAGGGCUAGUUGCACAUAGUGAUUUAGAUGAAAGAGCUAUUGAAGCUYUAAAAGAAUUCAAUGAAGACGGUGCAUUGGCAGUUCUUCAACAGUUUAAAGm6ACAGUGAUCUCUCUCAUGUUCAGAACAAAAGUGCCUUUUUAUGUGGAGUCAUGAAGACUUACAGGCAGAGAGAAAAACAAGGGACCAAAGUAGCAGAUUCUAGUAAAGGACCAGAUGAGGCAAAAAUUAAGGCACUCUUGGAAAGAACAGGCUACACACUUGAUGUGACCACUGGACAGAGGAAGUAUGGAGGACCACCUCCAGAUUCCGUUUAUUCAGGUCAGCAGCCUUCUGUUGGCACUGAGAUAUUUGUGGGAAAGAUCCCAAGAGAUCUAUUUGAGGAUGAACUUGUUCCAUUAUUUGAGAAAGCUGGACCUAUAUGGGAUCUUCGUCUAAUGAUGGAUCCACUCACUGGUCUCAAUAGAGGUUAUGCGUUUGUCACUUUUUGUACm6AAAAGAAGCAGCUCAGGAGGCUGUUAAACUGUAUAAUAAUCAUGAAAUUCGUUCUGGAAAACAUAUUGGUGUCUGCAUCUCAGUUGCCAACAAUAGGCUUUUUGUGGGCUCUAUUCCUAAGAGUAAAACCAAGGAACAGAUUCUUGAAGAAUUUAGCAAAGUAACAGAGGGUCUUACAGACGUCAUUUUAUACCACCAACCGGAUGACAAGAAAAAAAACAGAGGCUUUUGCUUUCUUGAAUAUGAAGAUCACAAAACAGCUGCCCAGGUAAAAGUGCUGUUUGUACGCAACCUUGCCAAUACUGUAm6ACAGAAGAGAUUUUAGAAAAGGCAUUUAGUCAGUUUGGGAAACUGGAACGAGUGAAGAAGUUAAAAGAUUAUGCGUUCAUUCAUUUUGAUGAGCGAGAUGGUGCUGUCAAGGCUAUGGAAGAAAUGAAUGGCAAAGACUUGGAGGGAGAAAAUAUUGAAAUUGUUUUUGCCAAGCCACCAGAUCAGAAAAGGAAAGAAAGAAAAGCUCAGAGGCAAGCAGCAAAAAAUCAAAUGUAUGACGAUUACUACUAUUAUGGUCCACCUCAUAUGCCCCCUCCAACAAGAGGUCGAGGGCGUGGAGGUAGAGGUGGUUAUGGAUAUCCYCCAGAUUAUUAUGGAUAUGAAGAUUAUUAUGAUUAUUAUGGUUAUGAUUACCAUAm6ACUAUCGUGGUGGAUAUGAAGAUCCAUACUAUGGUUAUGAAGAUUUUCAAGUUGGAGCUAGAGGAAGGGGUGGUAGAGGAGCAAGGGGUGCUGCUCCAYCCAGAGGUCGUGGGGCUGCUCCUCCCCGCGGUAGAGCCGGUUAUUCACAGAGAGGAGGUCCUGGAUCAGCAAGAGGCGUUCGAGGUGCGAGAGGAGGUGCCCAACAACAAAGAGGCCGCGGGGUACGUGGUGCGAGGGGUGGCCGCGGUGGAAAUGUAGGAGGAAAGCGCAAAGCUGAUGGGUACAACCAGCCAGAUUCCAAGCGGCGCCAGACCAAUAAUCAGAm6ACUGGGGCUCCCAACCCAUUGCUCAGCAACCGCUCCAAGGUGGUGAUCAUUCUGGUAm6ACUAUGGUUACAAAUCUGAAAACCAGGAGUUUUAUCAGGAUACUUUUGGGCAACAGUGGAAGUAGAAm6ACAGUAGGGCCUCUGUAAAAUUGGAG
Sequence (MODOMICS CODE ENCODING)	ACCGGGAGCGCGCUCGGAGGCGAGUGGAACUGGAUCGGGUUUGCUGCCAGCGGCGUGAGCUUCGGCCGCCAUUUUACAACAGCUCCACUCGCGCCGGACACAGGGAGCAGCGAGCACGCGUUUCCCGCAACCCGAUACCAUCGGACAGGAUUUCUCCGCCUCAGCCCAACGGGGAGGGCUAGUUGCACAUAGUGAUUUAGAUGAAAGAGCUAUUGAAGCU2000000009UUAAAAGAAUUCAAUGAAGACGGUGCAUUGGCAGUUCUUCAACAGUUUAAAG2000000006ACAGUGAUCUCUCUCAUGUUCAGAACAAAAGUGCCUUUUUAUGUGGAGUCAUGAAGACUUACAGGCAGAGAGAAAAACAAGGGACCAAAGUAGCAGAUUCUAGUAAAGGACCAGAUGAGGCAAAAAUUAAGGCACUCUUGGAAAGAACAGGCUACACACUUGAUGUGACCACUGGACAGAGGAAGUAUGGAGGACCACCUCCAGAUUCCGUUUAUUCAGGUCAGCAGCCUUCUGUUGGCACUGAGAUAUUUGUGGGAAAGAUCCCAAGAGAUCUAUUUGAGGAUGAACUUGUUCCAUUAUUUGAGAAAGCUGGACCUAUAUGGGAUCUUCGUCUAAUGAUGGAUCCACUCACUGGUCUCAAUAGAGGUUAUGCGUUUGUCACUUUUUGUAC2000000006AAAAGAAGCAGCUCAGGAGGCUGUUAAACUGUAUAAUAAUCAUGAAAUUCGUUCUGGAAAACAUAUUGGUGUCUGCAUCUCAGUUGCCAACAAUAGGCUUUUUGUGGGCUCUAUUCCUAAGAGUAAAACCAAGGAACAGAUUCUUGAAGAAUUUAGCAAAGUAACAGAGGGUCUUACAGACGUCAUUUUAUACCACCAACCGGAUGACAAGAAAAAAAACAGAGGCUUUUGCUUUCUUGAAUAUGAAGAUCACAAAACAGCUGCCCAGGUAAAAGUGCUGUUUGUACGCAACCUUGCCAAUACUGUA2000000006ACAGAAGAGAUUUUAGAAAAGGCAUUUAGUCAGUUUGGGAAACUGGAACGAGUGAAGAAGUUAAAAGAUUAUGCGUUCAUUCAUUUUGAUGAGCGAGAUGGUGCUGUCAAGGCUAUGGAAGAAAUGAAUGGCAAAGACUUGGAGGGAGAAAAUAUUGAAAUUGUUUUUGCCAAGCCACCAGAUCAGAAAAGGAAAGAAAGAAAAGCUCAGAGGCAAGCAGCAAAAAAUCAAAUGUAUGACGAUUACUACUAUUAUGGUCCACCUCAUAUGCCCCCUCCAACAAGAGGUCGAGGGCGUGGAGGUAGAGGUGGUUAUGGAUAUCC2000000009UCCAGAUUAUUAUGGAUAUGAAGAUUAUUAUGAUUAUUAUGGUUAUGAUUACCAUA2000000006ACUAUCGUGGUGGAUAUGAAGAUCCAUACUAUGGUUAUGAAGAUUUUCAAGUUGGAGCUAGAGGAAGGGGUGGUAGAGGAGCAAGGGGUGCUGCUCCA2000000009UCCAGAGGUCGUGGGGCUGCUCCUCCCCGCGGUAGAGCCGGUUAUUCACAGAGAGGAGGUCCUGGAUCAGCAAGAGGCGUUCGAGGUGCGAGAGGAGGUGCCCAACAACAAAGAGGCCGCGGGGUACGUGGUGCGAGGGGUGGCCGCGGUGGAAAUGUAGGAGGAAAGCGCAAAGCUGAUGGGUACAACCAGCCAGAUUCCAAGCGGCGCCAGACCAAUAAUCAGA2000000006ACUGGGGCUCCCAACCCAUUGCUCAGCAACCGCUCCAAGGUGGUGAUCAUUCUGGUA2000000006ACUAUGGUUACAAAUCUGAAAACCAGGAGUUUUAUCAGGAUACUUUUGGGCAACAGUGGAAGUAGAA2000000006ACAGUAGGGCCUCUGUAAAAUUGGAG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	221	273	664	971	1294	1350	1448	1674	1731	1798
Modification Positions	Y	m6A	m6A	m6A	Y	m6A	Y	m6A	m6A	m6A
Genomic Coordinates	6:85640520:-	6:85640468:-	6:85636997:-	6:85619378:-	6:85615257:-	6:85615201:-	6:85615103:-	6:85614877:-	6:85614820:-	6:85614753:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	ArijeGVTwYBw WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx gZuvgwMuBfgh msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8