General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000700673
Gene ID:	ENSG00000112159
Gene Name:	MDN1
Sequence (UNICHARACTER ENCODING)	AGAAGAGCUAGCUAAGGAUGCUGGUUUAAUCGCUGCCUCCCCAUUUCAAAAUGUCUUUUGUUGACAGGAUUCUAUCUUGGACAUUAAAGUACCGAUAUUUAAAGGACCUGGAGAGAUGCCUGAAAUCCGAUCCUACAUGGAAGAGUUCCCAUUCCCAUACUAUAUCAUUCUUCGAGAUGUAAACGCACUUCCUGAGACACUCAGCGAUGCCCUCAGACAGUGGUUUGAGUUGGUGACAGCCUCUGACCACCCAUAGAЖCAGAAAGAAGAGUCCAAAGUGAGЖCUUAЖCUGUGGUCAGAAGGUCACAUUGCUUACCCAGGUGCUCCCUUUUGGЖCAACUACAAAAAAUUUUAUUGUAAUAUUUUUAUUUUACAACGUGAUCUUACAGCCUACAGAAUGCUCUCUGGCUCCCGGCUUUGCCUGGGCUGAGGUUUUUAUACCAAACCUGGAAGCAGCAGCAGGUGCCUGAЖCUCGUAACUAGAGAAGAGUUAUCCUUCUUCCCUGCCUUGGAAGCCCUGGCCUGGGAGGAGGUCAUACCCCACCGUUGGAGCCCAGCUGCCUGUUUUCUUUUGCAGGGGAUCUGGGCACCUGUGCCUUGAGGAGAUGCUGCCAGGAGCAUGGGЖCUCUGACAGUCCUUUGUAUAAAGGЖCUAAAGGGAGCUGCCCUUUUGACCCUGUUCUAAGCUCUGCCUUGCCAAGCCCAUAGUGUGUGCCCAAAAGCUGUCAAGUGGCCAAGACAGCUCGUUUCUGGAGAGUAUGAGGGUGUGUUUUCUUAUUGUGAAAGGAACUACCUUCUCUUAGAGGGUAGGAAGAAUGUGGUGUGUGUGUGUUCUCAUAAAGCAACUGGЖCAUUAUAGGUGCCCAGGUCAUCUAUAAAAACGAUCCUUGGGCUGUGUAAAAAUGAAGUGGCUUUUCAGUAUCCUCUUUCACACUUGCUGCUUCGGGAGACUAUGCAAUGAUGGGAAGGUGAUUGCCCCUPUAUUUCAUUCAGUGCCAUGGUCCCUGUUGUUGUAGUAAUUUAUUUGUUUAGUUCAUUUUUUUUUUUCUUAЖCAGUCAAGGGGAAGAGUGAUUCCUCACACUGCUUUCAAGCUGGЖCUGAGCCAGUCUCAUUCUGGGAAAGAAACGCUGUGUCCAGAACUCAGCAGCUCCAUCUAUUUUUUCCAGUCGAAAGAAACUGAUCUPUAGGCAGUUUUUACUUGGCCAGAAAGCAGUGCUGAAUACUUGAAACUGUGUGCUCUGUUCUACUUAAUGUUCUGUCAGAAUGUUCUUUUGUAGGCAGUAUGUCAUGAUGUAAUCAUCUAUCUCCUUGUCUGUUUCCAAGUUACACUGUGAAGUCUGCGACCCUUUUGAGGUGGUCAUCAAAGACACAGAUUCCUUGUUUAACCAAGUGUCCCAAAGCAUGUACCUGAAGUUAUAUCAUUUUUUAUUCUAAAAAGCUAUGCAGCUUAUAUUCUGAAAACUAUUAAAACAUAUACCACUGU
Sequence (SHORT NAMES ENCODING)	AGAAGAGCUAGCUAAGGAUGCUGGUUUAAUCGCUGCCUCCCCAUUUCAAAAUGUCUUUUGUUGACAGGAUUCUAUCUUGGACAUUAAAGUACCGAUAUUUAAAGGACCUGGAGAGAUGCCUGAAAUCCGAUCCUACAUGGAAGAGUUCCCAUUCCCAUACUAUAUCAUUCUUCGAGAUGUAAACGCACUUCCUGAGACACUCAGCGAUGCCCUCAGACAGUGGUUUGAGUUGGUGACAGCCUCUGACCACCCAUAGAm6ACAGAAAGAAGAGUCCAAAGUGAGm6ACUUAm6ACUGUGGUCAGAAGGUCACAUUGCUUACCCAGGUGCUCCCUUUUGGm6ACAACUACAAAAAAUUUUAUUGUAAUAUUUUUAUUUUACAACGUGAUCUUACAGCCUACAGAAUGCUCUCUGGCUCCCGGCUUUGCCUGGGCUGAGGUUUUUAUACCAAACCUGGAAGCAGCAGCAGGUGCCUGAm6ACUCGUAACUAGAGAAGAGUUAUCCUUCUUCCCUGCCUUGGAAGCCCUGGCCUGGGAGGAGGUCAUACCCCACCGUUGGAGCCCAGCUGCCUGUUUUCUUUUGCAGGGGAUCUGGGCACCUGUGCCUUGAGGAGAUGCUGCCAGGAGCAUGGGm6ACUCUGACAGUCCUUUGUAUAAAGGm6ACUAAAGGGAGCUGCCCUUUUGACCCUGUUCUAAGCUCUGCCUUGCCAAGCCCAUAGUGUGUGCCCAAAAGCUGUCAAGUGGCCAAGACAGCUCGUUUCUGGAGAGUAUGAGGGUGUGUUUUCUUAUUGUGAAAGGAACUACCUUCUCUUAGAGGGUAGGAAGAAUGUGGUGUGUGUGUGUUCUCAUAAAGCAACUGGm6ACAUUAUAGGUGCCCAGGUCAUCUAUAAAAACGAUCCUUGGGCUGUGUAAAAAUGAAGUGGCUUUUCAGUAUCCUCUUUCACACUUGCUGCUUCGGGAGACUAUGCAAUGAUGGGAAGGUGAUUGCCCCUYUAUUUCAUUCAGUGCCAUGGUCCCUGUUGUUGUAGUAAUUUAUUUGUUUAGUUCAUUUUUUUUUUUCUUAm6ACAGUCAAGGGGAAGAGUGAUUCCUCACACUGCUUUCAAGCUGGm6ACUGAGCCAGUCUCAUUCUGGGAAAGAAACGCUGUGUCCAGAACUCAGCAGCUCCAUCUAUUUUUUCCAGUCGAAAGAAACUGAUCUYUAGGCAGUUUUUACUUGGCCAGAAAGCAGUGCUGAAUACUUGAAACUGUGUGCUCUGUUCUACUUAAUGUUCUGUCAGAAUGUUCUUUUGUAGGCAGUAUGUCAUGAUGUAAUCAUCUAUCUCCUUGUCUGUUUCCAAGUUACACUGUGAAGUCUGCGACCCUUUUGAGGUGGUCAUCAAAGACACAGAUUCCUUGUUUAACCAAGUGUCCCAAAGCAUGUACCUGAAGUUAUAUCAUUUUUUAUUCUAAAAAGCUAUGCAGCUUAUAUUCUGAAAACUAUUAAAACAUAUACCACUGU
Sequence (MODOMICS CODE ENCODING)	AGAAGAGCUAGCUAAGGAUGCUGGUUUAAUCGCUGCCUCCCCAUUUCAAAAUGUCUUUUGUUGACAGGAUUCUAUCUUGGACAUUAAAGUACCGAUAUUUAAAGGACCUGGAGAGAUGCCUGAAAUCCGAUCCUACAUGGAAGAGUUCCCAUUCCCAUACUAUAUCAUUCUUCGAGAUGUAAACGCACUUCCUGAGACACUCAGCGAUGCCCUCAGACAGUGGUUUGAGUUGGUGACAGCCUCUGACCACCCAUAGA2000000006ACAGAAAGAAGAGUCCAAAGUGAG2000000006ACUUA2000000006ACUGUGGUCAGAAGGUCACAUUGCUUACCCAGGUGCUCCCUUUUGG2000000006ACAACUACAAAAAAUUUUAUUGUAAUAUUUUUAUUUUACAACGUGAUCUUACAGCCUACAGAAUGCUCUCUGGCUCCCGGCUUUGCCUGGGCUGAGGUUUUUAUACCAAACCUGGAAGCAGCAGCAGGUGCCUGA2000000006ACUCGUAACUAGAGAAGAGUUAUCCUUCUUCCCUGCCUUGGAAGCCCUGGCCUGGGAGGAGGUCAUACCCCACCGUUGGAGCCCAGCUGCCUGUUUUCUUUUGCAGGGGAUCUGGGCACCUGUGCCUUGAGGAGAUGCUGCCAGGAGCAUGGG2000000006ACUCUGACAGUCCUUUGUAUAAAGG2000000006ACUAAAGGGAGCUGCCCUUUUGACCCUGUUCUAAGCUCUGCCUUGCCAAGCCCAUAGUGUGUGCCCAAAAGCUGUCAAGUGGCCAAGACAGCUCGUUUCUGGAGAGUAUGAGGGUGUGUUUUCUUAUUGUGAAAGGAACUACCUUCUCUUAGAGGGUAGGAAGAAUGUGGUGUGUGUGUGUUCUCAUAAAGCAACUGG2000000006ACAUUAUAGGUGCCCAGGUCAUCUAUAAAAACGAUCCUUGGGCUGUGUAAAAAUGAAGUGGCUUUUCAGUAUCCUCUUUCACACUUGCUGCUUCGGGAGACUAUGCAAUGAUGGGAAGGUGAUUGCCCCU2000000009UUAUUUCAUUCAGUGCCAUGGUCCCUGUUGUUGUAGUAAUUUAUUUGUUUAGUUCAUUUUUUUUUUUCUUA2000000006ACAGUCAAGGGGAAGAGUGAUUCCUCACACUGCUUUCAAGCUGG2000000006ACUGAGCCAGUCUCAUUCUGGGAAAGAAACGCUGUGUCCAGAACUCAGCAGCUCCAUCUAUUUUUUCCAGUCGAAAGAAACUGAUCU2000000009UUAGGCAGUUUUUACUUGGCCAGAAAGCAGUGCUGAAUACUUGAAACUGUGUGCUCUGUUCUACUUAAUGUUCUGUCAGAAUGUUCUUUUGUAGGCAGUAUGUCAUGAUGUAAUCAUCUAUCUCCUUGUCUGUUUCCAAGUUACACUGUGAAGUCUGCGACCCUUUUGAGGUGGUCAUCAAAGACACAGAUUCCUUGUUUAACCAAGUGUCCCAAAGCAUGUACCUGAAGUUAUAUCAUUUUUUAUUCUAAAAAGCUAUGCAGCUUAUAUUCUGAAAACUAUUAAAACAUAUACCACUGU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	258	282	287	333	468	621	646	844	974	1045	1089	1176
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A	Y
Genomic Coordinates	6:89644003:-	6:89643979:-	6:89643974:-	6:89643928:-	6:89643793:-	6:89643640:-	6:89643615:-	6:89643417:-	6:89643287:-	6:89643216:-	6:89643172:-	6:89643085:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	6UuHp6YApVKv msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	6UuHp6YApVKv gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 93arJtwJmuS9 KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U KjeH7Nsffuas Lny8GcCeVGc9 BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq XWZVGdLC6gGJ S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8