General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000376377
Gene ID:	ENSG00000137331
Gene Name:	IER3
Sequence (UNICHARACTER ENCODING)	CЖCUUGGCCUUACACUCCGCUCGGCUCACCAUGUGUCACUCUCGCAGCUGCCACCCGACCAUGACCAPCCUGCAGGCCCCGACCCCGGCCCCCPCCACCAUCCCGGGACCCCGGCGGGGCUCCGGUCCUGAGAUCUUCACCUUCGACCCUCUCCCGGAGCCCGCAGCGGCCCCUGCCGGGCGCCCCAGCGCCUCUCGCGGGCACCGAAAGCGCAGCCGCAGGGUUCUCUACCCUCGAGUGGUGAGUAUCGCCGAAGUGGGCAUUCGCGGGGUGCGCUGCCCUGGAGUCACUGGGGAACGACCCGACUCCAGAGGCCUCGACCUGACCUGUCUCCUGUUUUGUCUCCCCUUAGGUCCGGCGCCAGCUGCCAGUCGAGGAACCGAACCCAGCCAAAAGGCUUCUCUUUCUGCUGCUCACCAUCGUCUUCUGCCAGAUCCUGAUGGCUGAAGAGGGUGUGCCGGCGCCCCUGCCUCCAGAGGACGCCCCUAACGCCGCAUCCCUGGCGCCCACCCCUGUGUCCGCCGUCCUCGAGCCCUPUAAUCUGACUUCGGAGCCCUCGGACUACGCUCUGGACCUCAGCACUUUCCUCCAGCAACACCCGGCCGCCUUCUAACUGUGACUCCCCGCACUCCCCAAAAAGAAUCCGAAAAACCACAAAGAAACACCAGGCGUACCUGGUGCGCGAGAGCGUAUCCCCAACUGGGЖCUUCCGAGGCAACUUGAЖCUCAGAACACUACAGCGGAGACGCCACCCGGUGCUUGAGGCGGGACCGAGGCGCACAGAGЖCCGAGGCGCAUAGAGЖCCGAGGCACAGCCCAGCUGGGGCUAGGCCC#GUGGGAAGGAGAGCGUCGUUAAUUUAUUUCUUAUUGCUCCUAAUUAAUAUUUAUAUGUAUUUAUGUACGUCCPCCUAGGUGAUGGAGAUGUGUACGUAAUAUUUAUUUUAЖCUUAUGCAAGGGUGUGAGAUGUUCCCCCUGCUGUAAAUGCAGGUCUCUUGGUAUUUAUUGAGCUUUGUGGGЖCUGGUGGAAGCAGGACACCUGGAЖCUGCGGCAAAGUAGGAGAAGAAAUGGGGAGGACUCGGGUGGGGGAGGACGUCCCGGCUGGGAUGAAGUCUGGUGGUGGGUCGUAAGUUUAGGAGGUGACUGCAPCCUCCAGCAUCUCAACUCCGUCUGUCUACUGUGUGAGACUUCGGCGGACCAUUAGGAAUGAGAUCCGUGAGAUCCUUCCAUCUUCUUGAAGUCGCCUPUAGGGUGGCUGCGAGGUAGAGGGUUGGGGGUUGGUGGGCUGUCACGGAGCGACUGUCGAGAUCGCCUAGUAUGUUCUGUGAACACAAAUAAAAUUGAUUUACUGUCUGCA
Sequence (SHORT NAMES ENCODING)	Cm6ACUUGGCCUUACACUCCGCUCGGCUCACCAUGUGUCACUCUCGCAGCUGCCACCCGACCAUGACCAYCCUGCAGGCCCCGACCCCGGCCCCCYCCACCAUCCCGGGACCCCGGCGGGGCUCCGGUCCUGAGAUCUUCACCUUCGACCCUCUCCCGGAGCCCGCAGCGGCCCCUGCCGGGCGCCCCAGCGCCUCUCGCGGGCACCGAAAGCGCAGCCGCAGGGUUCUCUACCCUCGAGUGGUGAGUAUCGCCGAAGUGGGCAUUCGCGGGGUGCGCUGCCCUGGAGUCACUGGGGAACGACCCGACUCCAGAGGCCUCGACCUGACCUGUCUCCUGUUUUGUCUCCCCUUAGGUCCGGCGCCAGCUGCCAGUCGAGGAACCGAACCCAGCCAAAAGGCUUCUCUUUCUGCUGCUCACCAUCGUCUUCUGCCAGAUCCUGAUGGCUGAAGAGGGUGUGCCGGCGCCCCUGCCUCCAGAGGACGCCCCUAACGCCGCAUCCCUGGCGCCCACCCCUGUGUCCGCCGUCCUCGAGCCCUYUAAUCUGACUUCGGAGCCCUCGGACUACGCUCUGGACCUCAGCACUUUCCUCCAGCAACACCCGGCCGCCUUCUAACUGUGACUCCCCGCACUCCCCAAAAAGAAUCCGAAAAACCACAAAGAAACACCAGGCGUACCUGGUGCGCGAGAGCGUAUCCCCAACUGGGm6ACUUCCGAGGCAACUUGAm6ACUCAGAACACUACAGCGGAGACGCCACCCGGUGCUUGAGGCGGGACCGAGGCGCACAGAGm6ACCGAGGCGCAUAGAGm6ACCGAGGCACAGCCCAGCUGGGGCUAGGCCCGmGUGGGAAGGAGAGCGUCGUUAAUUUAUUUCUUAUUGCUCCUAAUUAAUAUUUAUAUGUAUUUAUGUACGUCCYCCUAGGUGAUGGAGAUGUGUACGUAAUAUUUAUUUUAm6ACUUAUGCAAGGGUGUGAGAUGUUCCCCCUGCUGUAAAUGCAGGUCUCUUGGUAUUUAUUGAGCUUUGUGGGm6ACUGGUGGAAGCAGGACACCUGGAm6ACUGCGGCAAAGUAGGAGAAGAAAUGGGGAGGACUCGGGUGGGGGAGGACGUCCCGGCUGGGAUGAAGUCUGGUGGUGGGUCGUAAGUUUAGGAGGUGACUGCAYCCUCCAGCAUCUCAACUCCGUCUGUCUACUGUGUGAGACUUCGGCGGACCAUUAGGAAUGAGAUCCGUGAGAUCCUUCCAUCUUCUUGAAGUCGCCUYUAGGGUGGCUGCGAGGUAGAGGGUUGGGGGUUGGUGGGCUGUCACGGAGCGACUGUCGAGAUCGCCUAGUAUGUUCUGUGAACACAAAUAAAAUUGAUUUACUGUCUGCA
Sequence (MODOMICS CODE ENCODING)	C2000000006ACUUGGCCUUACACUCCGCUCGGCUCACCAUGUGUCACUCUCGCAGCUGCCACCCGACCAUGACCA2000000009UCCUGCAGGCCCCGACCCCGGCCCCC2000000009UCCACCAUCCCGGGACCCCGGCGGGGCUCCGGUCCUGAGAUCUUCACCUUCGACCCUCUCCCGGAGCCCGCAGCGGCCCCUGCCGGGCGCCCCAGCGCCUCUCGCGGGCACCGAAAGCGCAGCCGCAGGGUUCUCUACCCUCGAGUGGUGAGUAUCGCCGAAGUGGGCAUUCGCGGGGUGCGCUGCCCUGGAGUCACUGGGGAACGACCCGACUCCAGAGGCCUCGACCUGACCUGUCUCCUGUUUUGUCUCCCCUUAGGUCCGGCGCCAGCUGCCAGUCGAGGAACCGAACCCAGCCAAAAGGCUUCUCUUUCUGCUGCUCACCAUCGUCUUCUGCCAGAUCCUGAUGGCUGAAGAGGGUGUGCCGGCGCCCCUGCCUCCAGAGGACGCCCCUAACGCCGCAUCCCUGGCGCCCACCCCUGUGUCCGCCGUCCUCGAGCCCU2000000009UUAAUCUGACUUCGGAGCCCUCGGACUACGCUCUGGACCUCAGCACUUUCCUCCAGCAACACCCGGCCGCCUUCUAACUGUGACUCCCCGCACUCCCCAAAAAGAAUCCGAAAAACCACAAAGAAACACCAGGCGUACCUGGUGCGCGAGAGCGUAUCCCCAACUGGG2000000006ACUUCCGAGGCAACUUGA2000000006ACUCAGAACACUACAGCGGAGACGCCACCCGGUGCUUGAGGCGGGACCGAGGCGCACAGAG2000000006ACCGAGGCGCAUAGAG2000000006ACCGAGGCACAGCCCAGCUGGGGCUAGGCCC2000000090GGUGGGAAGGAGAGCGUCGUUAAUUUAUUUCUUAUUGCUCCUAAUUAAUAUUUAUAUGUAUUUAUGUACGUCC2000000009UCCUAGGUGAUGGAGAUGUGUACGUAAUAUUUAUUUUA2000000006ACUUAUGCAAGGGUGUGAGAUGUUCCCCCUGCUGUAAAUGCAGGUCUCUUGGUAUUUAUUGAGCUUUGUGGG2000000006ACUGGUGGAAGCAGGACACCUGGA2000000006ACUGCGGCAAAGUAGGAGAAGAAAUGGGGAGGACUCGGGUGGGGGAGGACGUCCCGGCUGGGAUGAAGUCUGGUGGUGGGUCGUAAGUUUAGGAGGUGACUGCA2000000009UCCUCCAGCAUCUCAACUCCGUCUGUCUACUGUGUGAGACUUCGGCGGACCAUUAGGAAUGAGAUCCGUGAGAUCCUUCCAUCUUCUUGAAGUCGCCU2000000009UUAGGGUGGCUGCGAGGUAGAGGGUUGGGGGUUGGUGGGCUGUCACGGAGCGACUGUCGAGAUCGCCUAGUAUGUUCUGUGAACACAAAUAAAAUUGAUUUACUGUCUGCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	2	68	94	537	705	723	784	800	831	904	942	1014	1038	1142	1240
Modification Positions	m6A	Y	Y	Y	m6A	m6A	m6A	m6A	Gm	Y	m6A	m6A	m6A	Y	Y
Genomic Coordinates	6:30744547:-	6:30744481:-	6:30744455:-	6:30744012:-	6:30743844:-	6:30743826:-	6:30743765:-	6:30743749:-	6:30743718:-	6:30743645:-	6:30743607:-	6:30743535:-	6:30743511:-	6:30743407:-	6:30743309:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr	bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr	bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL 93arJtwJmuS9 WiQcrNTGZHPT bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ	3TeAZFYFxgvp 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ	jaSvBXBkn3xs YkSG92k4EHDM	bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ	NjZ8bGGJsNSR bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ	bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ a7o5Kmjr4Tdp	bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ JkWoGWVwjNda a7o5Kmjr4Tdp