General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000679915
Gene ID:	ENSG00000135333
Gene Name:	EPHA7
Sequence (UNICHARACTER ENCODING)	CAGUCGGAGACUUGCAGGCAGCAAACACGGUGCGAGCGAACAGGAGUGGGGGGGAAAUUAAAAAAAGCUAAACGUGGAGCAGCCGAUCGGGGACCGAGAAGGGGAAUCGAUGCAAGGAGCACAAUAAAACAAAAGCUACUUCGGAACAAACAGCAUUUAAAAAUCCACGACUCAAGAUAACUGAAACCUAAAAUAAAACCUGCUCAUGCACCAUGGUUUUUCAAACUCGGUACCCUUCAUGGAUUAUUUUAUGCUACAUCUGGCUGCUCCGCUUUGCACACACAGGGGAGGCGCAGGCUGCGAAGGAAGUACUACUGCUGGAUUCUAAAGCACAACAAACAGAGUUGGAGUGGAUUUCCUCUCCACCCAAUGGGUGGGAAGAAAUUAGUGGUUUGGAUGAGAACUAUACCCCGAUACGAACAUACCAGGUGUGCCAAGUCAUGGAGCCCAACCAAAACAACUGGCUGCGGЖCUAACUGGAUUUCCAAAGGCAAUGCACAAAGGAUUUUUGUAGAAUUGAAAUUCACCCUGAGGGЖUUGUAACAGUCUUCCUGGAGUACUGGGAЖCUUGCAAGGAAACAUUUAAUUUGUACUAUUAUGAAACAGЖCUAUGACACUGGCAGGAAUAUAAGAGAAAACCUCUAUGUAAAAAUAGACACCAUUGCUGCAGAUGAAAGUUUUACCCAAGGUGACCUUGGUGAAAGAAAGAUGAAGCUUAACACUGAGGUGAGAGAGAUUGGЖCCUUUGUCCAAAAAGGGЖUUCUAUCUUGCCUUUCAGGAUGUAGGGGCUUGCAUAGCUUUGGUUUCUGUCAAAGUGUACUACAAGAAGUGCUGGUCCAUUAUUGAGAЖCUUAGCUAUCUUUCCAGAUACAGUGЖCUGGUUCAGAAUUUUCCUCUUUAGUCGAGGUUCGAGGGЖCAUGUGUCAGCAGUGCAGAGGAAGAAGCGGAAAACGCCCCCAGGAUGCACUGCAGUGCAGAAGGAGAAUGGUUAGUGCCCAUUGGAAAAUGUAUCUGCAAAGCAGGCUACCAGCAAAAAGGAGACACUUGUGAACCCUGUGGCCGUGGGUUCUACAAGUCUUCCUCUCAAGAUCUUCAGUGCUCUCGUUGUCCAACUCACAGUUUUUCUGAUAAAGAAGGCUCCUCCAGAUGUGAAUGUGAAGAUGGGUAUUACAGGGCUCCAUCUGACCCACCAUACGUUGCGUGCACAAGGCCUCCAUCUGCACCACAGAACCUCAUUUUCAACAUCAACCAAACCACAGUAAGUUUGGAAUGGAGUCCUCCUGCAGACAAUGGGGGAAGAAACGAUGUGACCUACAGAAUAUUGUGUAAGCGGUGCAGUUGGGAGCAGGGCGAAUGUGUUCCCUGUGGGAGUAACAUUGGAUACAUGCCCCAGCAGЖCUGGAUUAGAGGAUAACUAUGUCACUGUCAUGGЖCCUGCUAGCCCACGCUAAUUAUACUUUUGAAGUUGAAGCUGUAAAUGGAGUUUCUGACUUAAGCCGAUCCCAGAGGCUCUUUGCUGCUGUCAGUAUCACCACUGGUCAAGCAGCUCCCUCGCAAGUGAGUGGAGUAAUGAAGGAGAGAGUACUGCAGCGGAGUGUCGAGCUUUCCUGGCAGGAACCAGAGCAUCCCAAUGGAGUCAUCACAGAAUAUGAAAUCAAGUAUUACGAGAAAGAUCAAAGGGAACGGACCUACUCAACAGUAAAAACCAAGUCUACUUCAGCCUCCAUUAAUAAUCUGAAACCAGGAACAGUGUAUGUUUUCCAGAUUCGGGCUUUUACUGCUGCUGGUUAUGGAAAUUACAGUCCCAGACUUGAUGUUGCUACACUAGAGGAAGCUACAGCUACAGCUGUCUCCAGUGAACAGAAUCCUGUUAUUAUCAUUGCUGUGGUUGCUGUAGCUGGGACCAUCAUUUUGGUGUUCAUGGUCUUUGGCUUCAUCAUUGGGAGAAGGUAGAACACAAAGUUGUUCUAAUCUCUAACAUAAAAUGUAUUGUUUUUUAAGAAUUAUGUCAGCCUAUUACUUAGUGUAAUAAAAUUUUAAAUAGUAAAUGCAAACAUUCUUUGAUAUAAAACAUUAAAGGUCAAUAAUGUGUCAUUCCUUCAAGAUCAAAAUGGAAUAUGAGUUUGAUCACUGCCUUUCAUUUAAAGAGAAUGAGUAUUGCAGUUUUUAUUGGGUGAAUAUUUUUGCUUAUUUUCAGAGUUAAGUUUUCAUAAUAAAUAUAGAAUAUACCUGGGGAAAUGUUUACUCUUUUAGC
Sequence (SHORT NAMES ENCODING)	CAGUCGGAGACUUGCAGGCAGCAAACACGGUGCGAGCGAACAGGAGUGGGGGGGAAAUUAAAAAAAGCUAAACGUGGAGCAGCCGAUCGGGGACCGAGAAGGGGAAUCGAUGCAAGGAGCACAAUAAAACAAAAGCUACUUCGGAACAAACAGCAUUUAAAAAUCCACGACUCAAGAUAACUGAAACCUAAAAUAAAACCUGCUCAUGCACCAUGGUUUUUCAAACUCGGUACCCUUCAUGGAUUAUUUUAUGCUACAUCUGGCUGCUCCGCUUUGCACACACAGGGGAGGCGCAGGCUGCGAAGGAAGUACUACUGCUGGAUUCUAAAGCACAACAAACAGAGUUGGAGUGGAUUUCCUCUCCACCCAAUGGGUGGGAAGAAAUUAGUGGUUUGGAUGAGAACUAUACCCCGAUACGAACAUACCAGGUGUGCCAAGUCAUGGAGCCCAACCAAAACAACUGGCUGCGGm6ACUAACUGGAUUUCCAAAGGCAAUGCACAAAGGAUUUUUGUAGAAUUGAAAUUCACCCUGAGGGm6AUUGUAACAGUCUUCCUGGAGUACUGGGAm6ACUUGCAAGGAAACAUUUAAUUUGUACUAUUAUGAAACAGm6ACUAUGACACUGGCAGGAAUAUAAGAGAAAACCUCUAUGUAAAAAUAGACACCAUUGCUGCAGAUGAAAGUUUUACCCAAGGUGACCUUGGUGAAAGAAAGAUGAAGCUUAACACUGAGGUGAGAGAGAUUGGm6ACCUUUGUCCAAAAAGGGm6AUUCUAUCUUGCCUUUCAGGAUGUAGGGGCUUGCAUAGCUUUGGUUUCUGUCAAAGUGUACUACAAGAAGUGCUGGUCCAUUAUUGAGAm6ACUUAGCUAUCUUUCCAGAUACAGUGm6ACUGGUUCAGAAUUUUCCUCUUUAGUCGAGGUUCGAGGGm6ACAUGUGUCAGCAGUGCAGAGGAAGAAGCGGAAAACGCCCCCAGGAUGCACUGCAGUGCAGAAGGAGAAUGGUUAGUGCCCAUUGGAAAAUGUAUCUGCAAAGCAGGCUACCAGCAAAAAGGAGACACUUGUGAACCCUGUGGCCGUGGGUUCUACAAGUCUUCCUCUCAAGAUCUUCAGUGCUCUCGUUGUCCAACUCACAGUUUUUCUGAUAAAGAAGGCUCCUCCAGAUGUGAAUGUGAAGAUGGGUAUUACAGGGCUCCAUCUGACCCACCAUACGUUGCGUGCACAAGGCCUCCAUCUGCACCACAGAACCUCAUUUUCAACAUCAACCAAACCACAGUAAGUUUGGAAUGGAGUCCUCCUGCAGACAAUGGGGGAAGAAACGAUGUGACCUACAGAAUAUUGUGUAAGCGGUGCAGUUGGGAGCAGGGCGAAUGUGUUCCCUGUGGGAGUAACAUUGGAUACAUGCCCCAGCAGm6ACUGGAUUAGAGGAUAACUAUGUCACUGUCAUGGm6ACCUGCUAGCCCACGCUAAUUAUACUUUUGAAGUUGAAGCUGUAAAUGGAGUUUCUGACUUAAGCCGAUCCCAGAGGCUCUUUGCUGCUGUCAGUAUCACCACUGGUCAAGCAGCUCCCUCGCAAGUGAGUGGAGUAAUGAAGGAGAGAGUACUGCAGCGGAGUGUCGAGCUUUCCUGGCAGGAACCAGAGCAUCCCAAUGGAGUCAUCACAGAAUAUGAAAUCAAGUAUUACGAGAAAGAUCAAAGGGAACGGACCUACUCAACAGUAAAAACCAAGUCUACUUCAGCCUCCAUUAAUAAUCUGAAACCAGGAACAGUGUAUGUUUUCCAGAUUCGGGCUUUUACUGCUGCUGGUUAUGGAAAUUACAGUCCCAGACUUGAUGUUGCUACACUAGAGGAAGCUACAGCUACAGCUGUCUCCAGUGAACAGAAUCCUGUUAUUAUCAUUGCUGUGGUUGCUGUAGCUGGGACCAUCAUUUUGGUGUUCAUGGUCUUUGGCUUCAUCAUUGGGAGAAGGUAGAACACAAAGUUGUUCUAAUCUCUAACAUAAAAUGUAUUGUUUUUUAAGAAUUAUGUCAGCCUAUUACUUAGUGUAAUAAAAUUUUAAAUAGUAAAUGCAAACAUUCUUUGAUAUAAAACAUUAAAGGUCAAUAAUGUGUCAUUCCUUCAAGAUCAAAAUGGAAUAUGAGUUUGAUCACUGCCUUUCAUUUAAAGAGAAUGAGUAUUGCAGUUUUUAUUGGGUGAAUAUUUUUGCUUAUUUUCAGAGUUAAGUUUUCAUAAUAAAUAUAGAAUAUACCUGGGGAAAUGUUUACUCUUUUAGC
Sequence (MODOMICS CODE ENCODING)	CAGUCGGAGACUUGCAGGCAGCAAACACGGUGCGAGCGAACAGGAGUGGGGGGGAAAUUAAAAAAAGCUAAACGUGGAGCAGCCGAUCGGGGACCGAGAAGGGGAAUCGAUGCAAGGAGCACAAUAAAACAAAAGCUACUUCGGAACAAACAGCAUUUAAAAAUCCACGACUCAAGAUAACUGAAACCUAAAAUAAAACCUGCUCAUGCACCAUGGUUUUUCAAACUCGGUACCCUUCAUGGAUUAUUUUAUGCUACAUCUGGCUGCUCCGCUUUGCACACACAGGGGAGGCGCAGGCUGCGAAGGAAGUACUACUGCUGGAUUCUAAAGCACAACAAACAGAGUUGGAGUGGAUUUCCUCUCCACCCAAUGGGUGGGAAGAAAUUAGUGGUUUGGAUGAGAACUAUACCCCGAUACGAACAUACCAGGUGUGCCAAGUCAUGGAGCCCAACCAAAACAACUGGCUGCGG2000000006ACUAACUGGAUUUCCAAAGGCAAUGCACAAAGGAUUUUUGUAGAAUUGAAAUUCACCCUGAGGG2000000006AUUGUAACAGUCUUCCUGGAGUACUGGGA2000000006ACUUGCAAGGAAACAUUUAAUUUGUACUAUUAUGAAACAG2000000006ACUAUGACACUGGCAGGAAUAUAAGAGAAAACCUCUAUGUAAAAAUAGACACCAUUGCUGCAGAUGAAAGUUUUACCCAAGGUGACCUUGGUGAAAGAAAGAUGAAGCUUAACACUGAGGUGAGAGAGAUUGG2000000006ACCUUUGUCCAAAAAGGG2000000006AUUCUAUCUUGCCUUUCAGGAUGUAGGGGCUUGCAUAGCUUUGGUUUCUGUCAAAGUGUACUACAAGAAGUGCUGGUCCAUUAUUGAGA2000000006ACUUAGCUAUCUUUCCAGAUACAGUG2000000006ACUGGUUCAGAAUUUUCCUCUUUAGUCGAGGUUCGAGGG2000000006ACAUGUGUCAGCAGUGCAGAGGAAGAAGCGGAAAACGCCCCCAGGAUGCACUGCAGUGCAGAAGGAGAAUGGUUAGUGCCCAUUGGAAAAUGUAUCUGCAAAGCAGGCUACCAGCAAAAAGGAGACACUUGUGAACCCUGUGGCCGUGGGUUCUACAAGUCUUCCUCUCAAGAUCUUCAGUGCUCUCGUUGUCCAACUCACAGUUUUUCUGAUAAAGAAGGCUCCUCCAGAUGUGAAUGUGAAGAUGGGUAUUACAGGGCUCCAUCUGACCCACCAUACGUUGCGUGCACAAGGCCUCCAUCUGCACCACAGAACCUCAUUUUCAACAUCAACCAAACCACAGUAAGUUUGGAAUGGAGUCCUCCUGCAGACAAUGGGGGAAGAAACGAUGUGACCUACAGAAUAUUGUGUAAGCGGUGCAGUUGGGAGCAGGGCGAAUGUGUUCCCUGUGGGAGUAACAUUGGAUACAUGCCCCAGCAG2000000006ACUGGAUUAGAGGAUAACUAUGUCACUGUCAUGG2000000006ACCUGCUAGCCCACGCUAAUUAUACUUUUGAAGUUGAAGCUGUAAAUGGAGUUUCUGACUUAAGCCGAUCCCAGAGGCUCUUUGCUGCUGUCAGUAUCACCACUGGUCAAGCAGCUCCCUCGCAAGUGAGUGGAGUAAUGAAGGAGAGAGUACUGCAGCGGAGUGUCGAGCUUUCCUGGCAGGAACCAGAGCAUCCCAAUGGAGUCAUCACAGAAUAUGAAAUCAAGUAUUACGAGAAAGAUCAAAGGGAACGGACCUACUCAACAGUAAAAACCAAGUCUACUUCAGCCUCCAUUAAUAAUCUGAAACCAGGAACAGUGUAUGUUUUCCAGAUUCGGGCUUUUACUGCUGCUGGUUAUGGAAAUUACAGUCCCAGACUUGAUGUUGCUACACUAGAGGAAGCUACAGCUACAGCUGUCUCCAGUGAACAGAAUCCUGUUAUUAUCAUUGCUGUGGUUGCUGUAGCUGGGACCAUCAUUUUGGUGUUCAUGGUCUUUGGCUUCAUCAUUGGGAGAAGGUAGAACACAAAGUUGUUCUAAUCUCUAACAUAAAAUGUAUUGUUUUUUAAGAAUUAUGUCAGCCUAUUACUUAGUGUAAUAAAAUUUUAAAUAGUAAAUGCAAACAUUCUUUGAUAUAAAACAUUAAAGGUCAAUAAUGUGUCAUUCCUUCAAGAUCAAAAUGGAAUAUGAGUUUGAUCACUGCCUUUCAUUUAAAGAGAAUGAGUAUUGCAGUUUUUAUUGGGUGAAUAUUUUUGCUUAUUUUCAGAGUUAAGUUUUCAUAAUAAAUAUAGAAUAUACCUGGGGAAAUGUUUACUCUUUUAGC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	471	535	564	604	737	755	844	870	909	1389	1423
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	6:93411074:-	6:93411010:-	6:93410981:-	6:93410941:-	6:93410808:-	6:93410790:-	6:93410701:-	6:93410675:-	6:93410636:-	6:93356864:-	6:93356830:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G	msuJfBpJvM5H VyCX26p5UBRL KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G	KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	msuJfBpJvM5H VyCX26p5UBRL PF5iqBNSbHaa UKen6WEino9G	4HMi5ykupT9V msuJfBpJvM5H VyCX26p5UBRL KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	4HMi5ykupT9V 5aTkEfEpX8Xm Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G	msuJfBpJvM5H VyCX26p5UBRL KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G