General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000376630
Gene ID:	ENSG00000204592
Gene Name:	HLA-E
Sequence (UNICHARACTER ENCODING)	CUCЖGGACUCAGAGGCUGGGAUCAUGGUAGAUGGAACCCUCCUUUUACUCCUCUCGGAGGCCCUGGCCCUUACCCAGACCUGGGCGGGCUCCCACUCCUUGAAGUAUUUCCACACUUCCGUGUCCCGGCCCGGCCGCGGGGAGCCCCGCUUCAUCUCUGUGGGCUACGUGGACGACACCCAGUUCGUGCGCUUCGACAACGACGCCGCGAGUCCGAGGAUGGUGCCGCGGGCGCCGUGGAUGGAGCAGGAGGGGUCAGAGUAUUGGGACCGGGAGACACGGAGCGCCAGGGACACCGCACAGAUUUUCCGAGUGAAUCUGCGGACGCUGCGCGGCUACUACAAUCAGAGCGAGGCCGGGUCUCACACCCUGCAGUGGAUGCAUGGCUGCGAGCUGGGGCCCGACGGGCGCUUCCPCCGCGGGUAUGAЖCAGUUCGCCUACGACGGCAAGGAUUAUCUCACCCUGAAUGAGGACCUGCGCUCCUGGACCGCGGUGGACACGGCGGCUCAGAUCUCCGAGCAAAAGUCAAAUGAUGCCUCUGAGGCGGAGCACCAGAGAGCCUACCUGGAAGACACAUGCGUGGAGUGGCUCCACAAAUACCUGGAGAAGGGGAAGGAGACGCUGCUUCACCUGGAGCCCCCAAAGACACACGUGACUCACCACCCCAUCUCUGACCAUGAGGCCACCCUGAGGUGCUGGGCCCUGGGCUUCUACCCUGCGGAGAUCACACUGACCUGGCAGCAGGAUGGGGAGGGCCAUACCCAGGACACGGAGCUCGUGGAGЖCCAGGCCUGCAGGGGAUGGAACCUUCCAGAAGUGGGCAGCUGUGGUGGUGCCUUCUGGAGAGGAGCAGAGAUACACGUGCCAUGUGCAGCAUGAGGGGCUACCCGAGCCCGUCACCCUGAGAUGGAAGCCGGCUUCCCAGCCCACCAPCCCCAUCGUGGGCAUCAUUGCUGGCCUGGUUCUCCUUGGAUCUGUGGUCUCUGGAGCUGUGGUUGCUGCUGUGAUAUGGAGGAAGAAGAGCUCAGGUGGAAAAGGAGGGAGCUACUCUAAGGCUGAGUGGAGCGACAGUGCCCAGGGGUCUGAGUCUCACAGCUUGUAAAGCCUGAGACAGCUGCCUUGUGUGCGACUGAGAUGCACAGCUGCCUUGUGUGCGACUGAGAUGCAGGAUUUCCUCACGCCUCCCCUAUGUGUCUUAGGGGACUCUGGCUUCUCUUUUUGCAAGGGCCUCUGAAUCUGUCUGUGUCCCUGUUAGCACAAUGUGAGGAGGUAGAGAAЖCAGUCCACCUCUGUGUCUACCAUGACCCCCUUCCUCACACUGACCUGUGUUCCUUCCCUGUUCUCUUUUCUAUUAAAAAUAAGAACCUGGGCAGAGUGCGGCAGCUCAUGCCUGUAAUCCCAGCACUUAGGGAGGCCGAGGAGGGCAGAUCACGAGGUCAGGAGAUCGAAACCAPCCUGGCUAЖCACGGUGAAACCCCGUCUCUACUAAAAAAUACAAAAAAUUAGCUGGGCGCAGAGGCACGGGCCUGUAGUCCCAGCUACUCAGGAGGCGGAGGCAGGAGAAUGGCGUCAACCCGGGAGGCGGAGGUUGCAGUGAGCCAGGAUUGUGCGACUGCACUCCAGCCUGGGUGACAGGGUGAAACGCCAUCUCAAAAAAUAAAAAUUGAAAAAUAAAAAAAGAACCUGGAUCUCAAUUUAAUUUUUCAUAUUCUUGCAAUGAAAUGGACUUGAGGAAGCUAAGAUCAUAGCUAGAAAUACAGAUAAUUCCACAGCACAUCUCUAGCAAAUUUAGCCUAUUCCUAUUCUCUAGCCUAUUCCUUACCACCUGUAAUCUUGACCAUAUACCUUGGAGUUGAAUAUUGUUUUCAUACUGCUGUGGUUUGAAUGUUCCCUCCAACACUCAUGUUGAGACUUAAUCCCUAAUGUGGCAAUACUGAAAGGUGGGGCCUUUGAGAUGUGAUUGGAUCGUAAGGCUGUGCCUUCAUUCAUGGGUUAAUGGAUUAAUGGGUUAUCACAGGAAUGGGACUGGUGGCUPUAUAAGAAGAGGAAAAGAGAACUGAGCUAGCAUGCCCAGCCCACAGAGAGCCUCCACUAGAGUGAUGCUAAGUGGAAAUGUGAGGUGCAGCUGCCACAGAGGGCCCCCACCAGGGAAAUGUCUAGUGUCUAGUGGAUCCAGGCCACAGGAGAGAGUGCCUUGUGGAGCGCUGGGAGCAGGACCUGACCACCACCAGGACCCCAGAACUGUGGAGUCAGUGGCAGCAUGCAGCGCCCCCUUGGGAAAGCUPUAGGCACCAGCCUGCAACCCAUUCGAGCAGCCACGUAGGCUGCACCCAGCAAAGCCACAGGCACGGGGCUACCUGAGGCCUUGGGGGCCCAAUCCCUGCUCCAGUGUGUCCGUGAGGCAGCACACGAAGUCAAAAGAGAUUAUUCUCUUCCCACAGAUACCUUUUCUCUCCCAUGACCCUPUAЖCAGCAUCUGCUUCAUUCCCCUCACCUUCCCAGGCUGAUCUGAGGUAAACUUUGAAGUAAAAUAAAAGCUGUGUUUGAGCAUCA
Sequence (SHORT NAMES ENCODING)	CUCm6AGGACUCAGAGGCUGGGAUCAUGGUAGAUGGAACCCUCCUUUUACUCCUCUCGGAGGCCCUGGCCCUUACCCAGACCUGGGCGGGCUCCCACUCCUUGAAGUAUUUCCACACUUCCGUGUCCCGGCCCGGCCGCGGGGAGCCCCGCUUCAUCUCUGUGGGCUACGUGGACGACACCCAGUUCGUGCGCUUCGACAACGACGCCGCGAGUCCGAGGAUGGUGCCGCGGGCGCCGUGGAUGGAGCAGGAGGGGUCAGAGUAUUGGGACCGGGAGACACGGAGCGCCAGGGACACCGCACAGAUUUUCCGAGUGAAUCUGCGGACGCUGCGCGGCUACUACAAUCAGAGCGAGGCCGGGUCUCACACCCUGCAGUGGAUGCAUGGCUGCGAGCUGGGGCCCGACGGGCGCUUCCYCCGCGGGUAUGAm6ACAGUUCGCCUACGACGGCAAGGAUUAUCUCACCCUGAAUGAGGACCUGCGCUCCUGGACCGCGGUGGACACGGCGGCUCAGAUCUCCGAGCAAAAGUCAAAUGAUGCCUCUGAGGCGGAGCACCAGAGAGCCUACCUGGAAGACACAUGCGUGGAGUGGCUCCACAAAUACCUGGAGAAGGGGAAGGAGACGCUGCUUCACCUGGAGCCCCCAAAGACACACGUGACUCACCACCCCAUCUCUGACCAUGAGGCCACCCUGAGGUGCUGGGCCCUGGGCUUCUACCCUGCGGAGAUCACACUGACCUGGCAGCAGGAUGGGGAGGGCCAUACCCAGGACACGGAGCUCGUGGAGm6ACCAGGCCUGCAGGGGAUGGAACCUUCCAGAAGUGGGCAGCUGUGGUGGUGCCUUCUGGAGAGGAGCAGAGAUACACGUGCCAUGUGCAGCAUGAGGGGCUACCCGAGCCCGUCACCCUGAGAUGGAAGCCGGCUUCCCAGCCCACCAYCCCCAUCGUGGGCAUCAUUGCUGGCCUGGUUCUCCUUGGAUCUGUGGUCUCUGGAGCUGUGGUUGCUGCUGUGAUAUGGAGGAAGAAGAGCUCAGGUGGAAAAGGAGGGAGCUACUCUAAGGCUGAGUGGAGCGACAGUGCCCAGGGGUCUGAGUCUCACAGCUUGUAAAGCCUGAGACAGCUGCCUUGUGUGCGACUGAGAUGCACAGCUGCCUUGUGUGCGACUGAGAUGCAGGAUUUCCUCACGCCUCCCCUAUGUGUCUUAGGGGACUCUGGCUUCUCUUUUUGCAAGGGCCUCUGAAUCUGUCUGUGUCCCUGUUAGCACAAUGUGAGGAGGUAGAGAAm6ACAGUCCACCUCUGUGUCUACCAUGACCCCCUUCCUCACACUGACCUGUGUUCCUUCCCUGUUCUCUUUUCUAUUAAAAAUAAGAACCUGGGCAGAGUGCGGCAGCUCAUGCCUGUAAUCCCAGCACUUAGGGAGGCCGAGGAGGGCAGAUCACGAGGUCAGGAGAUCGAAACCAYCCUGGCUAm6ACACGGUGAAACCCCGUCUCUACUAAAAAAUACAAAAAAUUAGCUGGGCGCAGAGGCACGGGCCUGUAGUCCCAGCUACUCAGGAGGCGGAGGCAGGAGAAUGGCGUCAACCCGGGAGGCGGAGGUUGCAGUGAGCCAGGAUUGUGCGACUGCACUCCAGCCUGGGUGACAGGGUGAAACGCCAUCUCAAAAAAUAAAAAUUGAAAAAUAAAAAAAGAACCUGGAUCUCAAUUUAAUUUUUCAUAUUCUUGCAAUGAAAUGGACUUGAGGAAGCUAAGAUCAUAGCUAGAAAUACAGAUAAUUCCACAGCACAUCUCUAGCAAAUUUAGCCUAUUCCUAUUCUCUAGCCUAUUCCUUACCACCUGUAAUCUUGACCAUAUACCUUGGAGUUGAAUAUUGUUUUCAUACUGCUGUGGUUUGAAUGUUCCCUCCAACACUCAUGUUGAGACUUAAUCCCUAAUGUGGCAAUACUGAAAGGUGGGGCCUUUGAGAUGUGAUUGGAUCGUAAGGCUGUGCCUUCAUUCAUGGGUUAAUGGAUUAAUGGGUUAUCACAGGAAUGGGACUGGUGGCUYUAUAAGAAGAGGAAAAGAGAACUGAGCUAGCAUGCCCAGCCCACAGAGAGCCUCCACUAGAGUGAUGCUAAGUGGAAAUGUGAGGUGCAGCUGCCACAGAGGGCCCCCACCAGGGAAAUGUCUAGUGUCUAGUGGAUCCAGGCCACAGGAGAGAGUGCCUUGUGGAGCGCUGGGAGCAGGACCUGACCACCACCAGGACCCCAGAACUGUGGAGUCAGUGGCAGCAUGCAGCGCCCCCUUGGGAAAGCUYUAGGCACCAGCCUGCAACCCAUUCGAGCAGCCACGUAGGCUGCACCCAGCAAAGCCACAGGCACGGGGCUACCUGAGGCCUUGGGGGCCCAAUCCCUGCUCCAGUGUGUCCGUGAGGCAGCACACGAAGUCAAAAGAGAUUAUUCUCUUCCCACAGAUACCUUUUCUCUCCCAUGACCCUYUAm6ACAGCAUCUGCUUCAUUCCCCUCACCUUCCCAGGCUGAUCUGAGGUAAACUUUGAAGUAAAAUAAAAGCUGUGUUUGAGCAUCA
Sequence (MODOMICS CODE ENCODING)	CUC2000000006AGGACUCAGAGGCUGGGAUCAUGGUAGAUGGAACCCUCCUUUUACUCCUCUCGGAGGCCCUGGCCCUUACCCAGACCUGGGCGGGCUCCCACUCCUUGAAGUAUUUCCACACUUCCGUGUCCCGGCCCGGCCGCGGGGAGCCCCGCUUCAUCUCUGUGGGCUACGUGGACGACACCCAGUUCGUGCGCUUCGACAACGACGCCGCGAGUCCGAGGAUGGUGCCGCGGGCGCCGUGGAUGGAGCAGGAGGGGUCAGAGUAUUGGGACCGGGAGACACGGAGCGCCAGGGACACCGCACAGAUUUUCCGAGUGAAUCUGCGGACGCUGCGCGGCUACUACAAUCAGAGCGAGGCCGGGUCUCACACCCUGCAGUGGAUGCAUGGCUGCGAGCUGGGGCCCGACGGGCGCUUCC2000000009UCCGCGGGUAUGA2000000006ACAGUUCGCCUACGACGGCAAGGAUUAUCUCACCCUGAAUGAGGACCUGCGCUCCUGGACCGCGGUGGACACGGCGGCUCAGAUCUCCGAGCAAAAGUCAAAUGAUGCCUCUGAGGCGGAGCACCAGAGAGCCUACCUGGAAGACACAUGCGUGGAGUGGCUCCACAAAUACCUGGAGAAGGGGAAGGAGACGCUGCUUCACCUGGAGCCCCCAAAGACACACGUGACUCACCACCCCAUCUCUGACCAUGAGGCCACCCUGAGGUGCUGGGCCCUGGGCUUCUACCCUGCGGAGAUCACACUGACCUGGCAGCAGGAUGGGGAGGGCCAUACCCAGGACACGGAGCUCGUGGAG2000000006ACCAGGCCUGCAGGGGAUGGAACCUUCCAGAAGUGGGCAGCUGUGGUGGUGCCUUCUGGAGAGGAGCAGAGAUACACGUGCCAUGUGCAGCAUGAGGGGCUACCCGAGCCCGUCACCCUGAGAUGGAAGCCGGCUUCCCAGCCCACCA2000000009UCCCCAUCGUGGGCAUCAUUGCUGGCCUGGUUCUCCUUGGAUCUGUGGUCUCUGGAGCUGUGGUUGCUGCUGUGAUAUGGAGGAAGAAGAGCUCAGGUGGAAAAGGAGGGAGCUACUCUAAGGCUGAGUGGAGCGACAGUGCCCAGGGGUCUGAGUCUCACAGCUUGUAAAGCCUGAGACAGCUGCCUUGUGUGCGACUGAGAUGCACAGCUGCCUUGUGUGCGACUGAGAUGCAGGAUUUCCUCACGCCUCCCCUAUGUGUCUUAGGGGACUCUGGCUUCUCUUUUUGCAAGGGCCUCUGAAUCUGUCUGUGUCCCUGUUAGCACAAUGUGAGGAGGUAGAGAA2000000006ACAGUCCACCUCUGUGUCUACCAUGACCCCCUUCCUCACACUGACCUGUGUUCCUUCCCUGUUCUCUUUUCUAUUAAAAAUAAGAACCUGGGCAGAGUGCGGCAGCUCAUGCCUGUAAUCCCAGCACUUAGGGAGGCCGAGGAGGGCAGAUCACGAGGUCAGGAGAUCGAAACCA2000000009UCCUGGCUA2000000006ACACGGUGAAACCCCGUCUCUACUAAAAAAUACAAAAAAUUAGCUGGGCGCAGAGGCACGGGCCUGUAGUCCCAGCUACUCAGGAGGCGGAGGCAGGAGAAUGGCGUCAACCCGGGAGGCGGAGGUUGCAGUGAGCCAGGAUUGUGCGACUGCACUCCAGCCUGGGUGACAGGGUGAAACGCCAUCUCAAAAAAUAAAAAUUGAAAAAUAAAAAAAGAACCUGGAUCUCAAUUUAAUUUUUCAUAUUCUUGCAAUGAAAUGGACUUGAGGAAGCUAAGAUCAUAGCUAGAAAUACAGAUAAUUCCACAGCACAUCUCUAGCAAAUUUAGCCUAUUCCUAUUCUCUAGCCUAUUCCUUACCACCUGUAAUCUUGACCAUAUACCUUGGAGUUGAAUAUUGUUUUCAUACUGCUGUGGUUUGAAUGUUCCCUCCAACACUCAUGUUGAGACUUAAUCCCUAAUGUGGCAAUACUGAAAGGUGGGGCCUUUGAGAUGUGAUUGGAUCGUAAGGCUGUGCCUUCAUUCAUGGGUUAAUGGAUUAAUGGGUUAUCACAGGAAUGGGACUGGUGGCU2000000009UUAUAAGAAGAGGAAAAGAGAACUGAGCUAGCAUGCCCAGCCCACAGAGAGCCUCCACUAGAGUGAUGCUAAGUGGAAAUGUGAGGUGCAGCUGCCACAGAGGGCCCCCACCAGGGAAAUGUCUAGUGUCUAGUGGAUCCAGGCCACAGGAGAGAGUGCCUUGUGGAGCGCUGGGAGCAGGACCUGACCACCACCAGGACCCCAGAACUGUGGAGUCAGUGGCAGCAUGCAGCGCCCCCUUGGGAAAGCU2000000009UUAGGCACCAGCCUGCAACCCAUUCGAGCAGCCACGUAGGCUGCACCCAGCAAAGCCACAGGCACGGGGCUACCUGAGGCCUUGGGGGCCCAAUCCCUGCUCCAGUGUGUCCGUGAGGCAGCACACGAAGUCAAAAGAGAUUAUUCUCUUCCCACAGAUACCUUUUCUCUCCCAUGACCCU2000000009UUA2000000006ACAGCAUCUGCUUCAUUCCCCUCACCUUCCCAGGCUGAUCUGAGGUAAACUUUGAAGUAAAAUAAAAGCUGUGUUUGAGCAUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	4	415	428	783	931	1276	1451	1460	2031	2281	2462	2465
Modification Positions	m6A	Y	m6A	m6A	Y	m6A	Y	m6A	Y	Y	Y	m6A
Genomic Coordinates	6:30489512:+	6:30490297:+	6:30490310:+	6:30491286:+	6:30491558:+	6:30492922:+	6:30493097:+	6:30493106:+	6:30493677:+	6:30493927:+	6:30494108:+	6:30494111:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8