General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000676542
Gene ID:	ENSG00000135316
Gene Name:	SYNCRIP
Sequence (UNICHARACTER ENCODING)	GCGCGCACCGGGAGCGCGCUCGGAGGCGAGUGGAACUGGAUCGGGUUUGCUGCCAGCGGCGUGAGCUUCGGCCGCCAUUUUACAACAGCUCCACUCGCGCCGGACACAGGGAGCAGCGAGCACGCGUUUCCCGCAACCCGAUACCAUCGGACAGGAUUUCUCCGCCUCAGCCCAACGGGGAGAUCUCUGGAAACAUGGCUACЖGAACAUGUUAAUGGAAAUGGUACUGAAGAGCCCAUGGAUACUACUUCUGCAGUUAUCCAUUCAGAAAAUUUUCAGACAUUGCUUGAUGCUGGUUUACCACAGAAAGUUGCUGAAAAACUAGAUGAAAUUUACGUUGCAGGGCUAGUUGCACAUAGUGAUUUAGAUGAAAGAGCUAUUGAAGCUPUAAAAGAAUUCAAUGAAGACGGUGCAUUGGCAGUUCUUCAACAGUUUAAAGЖCAGUGAUCUCUCUCAUGUUCAGAACAAAAGUGCCUUUUUAUGUGGAGUCAUGAAGACUUACAGGCAGAGAGAAAAACAAGGGACCAAAGUAGCAGAUUCUAGUAAAGGACCAGAUGAGGCAAAAAUUAAGGCACUCUUGGAAAGAACAGGCUACACACUUGAUGUGACCACUGGACAGAGGAAGUAUGGAGGACCACCUCCAGAUUCCGUUUAUUCAGGUCAGCAGCCUUCUGUUGGCACUGAGAUAUUUGUGGGAAAGAUCCCAAGAGAUCUAUUUGAGGAUGAACUUGUUCCAUUAUUUGAGAAAGCUGGACCUAUAUGGGAUCUUCGUCUAAUGAUGGAUCCACUCACUGGUCUCAAUAGAGGUUAUGCGUUUGUCACUUUUUGUACЖAAAGAAGCAGCUCAGGAGGCUGUUAAACUGUAUAAUAAUCAUGAAAUUCGUUCUGGAAAACAUAUUGGUGUCUGCAUCUCAGUUGCCAACAAUAGGCUUUUUGUGGGCUCUAUUCCUAAGAGUAAAACCAAGGAACAGAUUCUUGAAGAAUUUAGCAAAGUAACAGAGGGUCUUACAGACGUCAUUUUAUACCACCAACCGGAUGACAAGAAAAAAAACAGAGGCUUUUGCUUUCUUGAAUAUGAAGAUCACAAAACAGCUGCCCAGGCAAGGCGUAGGUUAAUGAGUGGUAAAGUCAAGGUCUGGGGGAAUGUUGGAACUGUUGAAUGGGCUGAUCCUAUAGAAGAUCCUGAUCCUGAGGUUAUGGCAAAGGUAAAAGUGCUGUUUGUACGCAACCUUGCCAAUACUGUAЖCAGAAGAGAUUUUAGAAAAGGCAUUUAGUCAGUUUGGGAAACUGGAACGAGUGAAGAAGUUAAAAGAUUAUGCGUUCAUUCAUUUUGAUGAGCGAGAUGGUGCUGUCAAGGCUAUGGAAGAAAUGAAUGGCAAAGACUUGGAGGGAGAAAAUAUUGAAAUUGUUUUUGCCAAGCCACCAGAUCAGAAAAGGAAAGAAAGAAAAGCUCAGAGGCAAGCAGCAAAAAAUCAAAUGUAUGACGAUUACUACUAUUAUGGUCCACCUCAUAUGCCCCCUCCAACAAGAGGUCGAGGGCGUGGAGGUAGAGGUGGUUAUGGAUAUCCPCCAGAUUAUUAUGGAUAUGAAGAUUAUUAUGAUUAUUAUGGUUAUGAUUACCAUAЖCUAUCGUGGUGGAUAUGAAGAUCCAUACUAUGGUUAUGAAGAUUUUCAAGUUGGAGCUAGAGGAAGGGGUGGUAGAGGAGCAAGGGGUGCUGCUCCAPCCAGAGGUCGUGGGGCUGCUCCUCCCCGCGGUAGAGCCGGUUAUUCACAGAGAGGAGGUCCUGGAUCAGCAAGAGGCGUUCGAGCAGGGAAAAGGGGUCGAGGCCGGUCCUGACCUGUUACAAUGAAGACUGACUUGCUAUGUGGGAUUACACCAGAAGCUUGCAGUGGAGUAAUGGUAAGGAAAUCAAGCAACCUUAAAUAUGUCGGCUGUAUAGGAGCAUAUUCUAUUGCAGAAGACCUUCCUAUGAAGAUCAUGGAAUCAAAUACGGGЖCAUUGAЖCUAAUACUUGGЖCUUUGAUAUGAAUUUCUPUAACAAUUUUCUCUGCAGUGCAAGUUAUUAAЖCUAAAGCUACUCUAUUUUCAAAAUGUGUUCCAACAGAAAUCCUUCAUAЖCUCCUAGCAUGGUAUCUUAAUAAAGAAUAAAGUUCUUUUAAAAAUCUGC
Sequence (SHORT NAMES ENCODING)	GCGCGCACCGGGAGCGCGCUCGGAGGCGAGUGGAACUGGAUCGGGUUUGCUGCCAGCGGCGUGAGCUUCGGCCGCCAUUUUACAACAGCUCCACUCGCGCCGGACACAGGGAGCAGCGAGCACGCGUUUCCCGCAACCCGAUACCAUCGGACAGGAUUUCUCCGCCUCAGCCCAACGGGGAGAUCUCUGGAAACAUGGCUACm6AGAACAUGUUAAUGGAAAUGGUACUGAAGAGCCCAUGGAUACUACUUCUGCAGUUAUCCAUUCAGAAAAUUUUCAGACAUUGCUUGAUGCUGGUUUACCACAGAAAGUUGCUGAAAAACUAGAUGAAAUUUACGUUGCAGGGCUAGUUGCACAUAGUGAUUUAGAUGAAAGAGCUAUUGAAGCUYUAAAAGAAUUCAAUGAAGACGGUGCAUUGGCAGUUCUUCAACAGUUUAAAGm6ACAGUGAUCUCUCUCAUGUUCAGAACAAAAGUGCCUUUUUAUGUGGAGUCAUGAAGACUUACAGGCAGAGAGAAAAACAAGGGACCAAAGUAGCAGAUUCUAGUAAAGGACCAGAUGAGGCAAAAAUUAAGGCACUCUUGGAAAGAACAGGCUACACACUUGAUGUGACCACUGGACAGAGGAAGUAUGGAGGACCACCUCCAGAUUCCGUUUAUUCAGGUCAGCAGCCUUCUGUUGGCACUGAGAUAUUUGUGGGAAAGAUCCCAAGAGAUCUAUUUGAGGAUGAACUUGUUCCAUUAUUUGAGAAAGCUGGACCUAUAUGGGAUCUUCGUCUAAUGAUGGAUCCACUCACUGGUCUCAAUAGAGGUUAUGCGUUUGUCACUUUUUGUACm6AAAAGAAGCAGCUCAGGAGGCUGUUAAACUGUAUAAUAAUCAUGAAAUUCGUUCUGGAAAACAUAUUGGUGUCUGCAUCUCAGUUGCCAACAAUAGGCUUUUUGUGGGCUCUAUUCCUAAGAGUAAAACCAAGGAACAGAUUCUUGAAGAAUUUAGCAAAGUAACAGAGGGUCUUACAGACGUCAUUUUAUACCACCAACCGGAUGACAAGAAAAAAAACAGAGGCUUUUGCUUUCUUGAAUAUGAAGAUCACAAAACAGCUGCCCAGGCAAGGCGUAGGUUAAUGAGUGGUAAAGUCAAGGUCUGGGGGAAUGUUGGAACUGUUGAAUGGGCUGAUCCUAUAGAAGAUCCUGAUCCUGAGGUUAUGGCAAAGGUAAAAGUGCUGUUUGUACGCAACCUUGCCAAUACUGUAm6ACAGAAGAGAUUUUAGAAAAGGCAUUUAGUCAGUUUGGGAAACUGGAACGAGUGAAGAAGUUAAAAGAUUAUGCGUUCAUUCAUUUUGAUGAGCGAGAUGGUGCUGUCAAGGCUAUGGAAGAAAUGAAUGGCAAAGACUUGGAGGGAGAAAAUAUUGAAAUUGUUUUUGCCAAGCCACCAGAUCAGAAAAGGAAAGAAAGAAAAGCUCAGAGGCAAGCAGCAAAAAAUCAAAUGUAUGACGAUUACUACUAUUAUGGUCCACCUCAUAUGCCCCCUCCAACAAGAGGUCGAGGGCGUGGAGGUAGAGGUGGUUAUGGAUAUCCYCCAGAUUAUUAUGGAUAUGAAGAUUAUUAUGAUUAUUAUGGUUAUGAUUACCAUAm6ACUAUCGUGGUGGAUAUGAAGAUCCAUACUAUGGUUAUGAAGAUUUUCAAGUUGGAGCUAGAGGAAGGGGUGGUAGAGGAGCAAGGGGUGCUGCUCCAYCCAGAGGUCGUGGGGCUGCUCCUCCCCGCGGUAGAGCCGGUUAUUCACAGAGAGGAGGUCCUGGAUCAGCAAGAGGCGUUCGAGCAGGGAAAAGGGGUCGAGGCCGGUCCUGACCUGUUACAAUGAAGACUGACUUGCUAUGUGGGAUUACACCAGAAGCUUGCAGUGGAGUAAUGGUAAGGAAAUCAAGCAACCUUAAAUAUGUCGGCUGUAUAGGAGCAUAUUCUAUUGCAGAAGACCUUCCUAUGAAGAUCAUGGAAUCAAAUACGGGm6ACAUUGAm6ACUAAUACUUGGm6ACUUUGAUAUGAAUUUCUYUAACAAUUUUCUCUGCAGUGCAAGUUAUUAAm6ACUAAAGCUACUCUAUUUUCAAAAUGUGUUCCAACAGAAAUCCUUCAUAm6ACUCCUAGCAUGGUAUCUUAAUAAAGAAUAAAGUUCUUUUAAAAAUCUGC
Sequence (MODOMICS CODE ENCODING)	GCGCGCACCGGGAGCGCGCUCGGAGGCGAGUGGAACUGGAUCGGGUUUGCUGCCAGCGGCGUGAGCUUCGGCCGCCAUUUUACAACAGCUCCACUCGCGCCGGACACAGGGAGCAGCGAGCACGCGUUUCCCGCAACCCGAUACCAUCGGACAGGAUUUCUCCGCCUCAGCCCAACGGGGAGAUCUCUGGAAACAUGGCUAC2000000006AGAACAUGUUAAUGGAAAUGGUACUGAAGAGCCCAUGGAUACUACUUCUGCAGUUAUCCAUUCAGAAAAUUUUCAGACAUUGCUUGAUGCUGGUUUACCACAGAAAGUUGCUGAAAAACUAGAUGAAAUUUACGUUGCAGGGCUAGUUGCACAUAGUGAUUUAGAUGAAAGAGCUAUUGAAGCU2000000009UUAAAAGAAUUCAAUGAAGACGGUGCAUUGGCAGUUCUUCAACAGUUUAAAG2000000006ACAGUGAUCUCUCUCAUGUUCAGAACAAAAGUGCCUUUUUAUGUGGAGUCAUGAAGACUUACAGGCAGAGAGAAAAACAAGGGACCAAAGUAGCAGAUUCUAGUAAAGGACCAGAUGAGGCAAAAAUUAAGGCACUCUUGGAAAGAACAGGCUACACACUUGAUGUGACCACUGGACAGAGGAAGUAUGGAGGACCACCUCCAGAUUCCGUUUAUUCAGGUCAGCAGCCUUCUGUUGGCACUGAGAUAUUUGUGGGAAAGAUCCCAAGAGAUCUAUUUGAGGAUGAACUUGUUCCAUUAUUUGAGAAAGCUGGACCUAUAUGGGAUCUUCGUCUAAUGAUGGAUCCACUCACUGGUCUCAAUAGAGGUUAUGCGUUUGUCACUUUUUGUAC2000000006AAAAGAAGCAGCUCAGGAGGCUGUUAAACUGUAUAAUAAUCAUGAAAUUCGUUCUGGAAAACAUAUUGGUGUCUGCAUCUCAGUUGCCAACAAUAGGCUUUUUGUGGGCUCUAUUCCUAAGAGUAAAACCAAGGAACAGAUUCUUGAAGAAUUUAGCAAAGUAACAGAGGGUCUUACAGACGUCAUUUUAUACCACCAACCGGAUGACAAGAAAAAAAACAGAGGCUUUUGCUUUCUUGAAUAUGAAGAUCACAAAACAGCUGCCCAGGCAAGGCGUAGGUUAAUGAGUGGUAAAGUCAAGGUCUGGGGGAAUGUUGGAACUGUUGAAUGGGCUGAUCCUAUAGAAGAUCCUGAUCCUGAGGUUAUGGCAAAGGUAAAAGUGCUGUUUGUACGCAACCUUGCCAAUACUGUA2000000006ACAGAAGAGAUUUUAGAAAAGGCAUUUAGUCAGUUUGGGAAACUGGAACGAGUGAAGAAGUUAAAAGAUUAUGCGUUCAUUCAUUUUGAUGAGCGAGAUGGUGCUGUCAAGGCUAUGGAAGAAAUGAAUGGCAAAGACUUGGAGGGAGAAAAUAUUGAAAUUGUUUUUGCCAAGCCACCAGAUCAGAAAAGGAAAGAAAGAAAAGCUCAGAGGCAAGCAGCAAAAAAUCAAAUGUAUGACGAUUACUACUAUUAUGGUCCACCUCAUAUGCCCCCUCCAACAAGAGGUCGAGGGCGUGGAGGUAGAGGUGGUUAUGGAUAUCC2000000009UCCAGAUUAUUAUGGAUAUGAAGAUUAUUAUGAUUAUUAUGGUUAUGAUUACCAUA2000000006ACUAUCGUGGUGGAUAUGAAGAUCCAUACUAUGGUUAUGAAGAUUUUCAAGUUGGAGCUAGAGGAAGGGGUGGUAGAGGAGCAAGGGGUGCUGCUCCA2000000009UCCAGAGGUCGUGGGGCUGCUCCUCCCCGCGGUAGAGCCGGUUAUUCACAGAGAGGAGGUCCUGGAUCAGCAAGAGGCGUUCGAGCAGGGAAAAGGGGUCGAGGCCGGUCCUGACCUGUUACAAUGAAGACUGACUUGCUAUGUGGGAUUACACCAGAAGCUUGCAGUGGAGUAAUGGUAAGGAAAUCAAGCAACCUUAAAUAUGUCGGCUGUAUAGGAGCAUAUUCUAUUGCAGAAGACCUUCCUAUGAAGAUCAUGGAAUCAAAUACGGG2000000006ACAUUGA2000000006ACUAAUACUUGG2000000006ACUUUGAUAUGAAUUUCU2000000009UUAACAAUUUUCUCUGCAGUGCAAGUUAUUAA2000000006ACUAAAGCUACUCUAUUUUCAAAAUGUGUUCCAACAGAAAUCCUUCAUA2000000006ACUCCUAGCAUGGUAUCUUAAUAAAGAAUAAAGUUCUUUUAAAAAUCUGC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	203	387	439	830	1242	1565	1621	1719	1991	1998	2010	2028	2060	2109
Modification Positions	m6A	Y	m6A	m6A	m6A	Y	m6A	Y	m6A	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	6:85641431:-	6:85640520:-	6:85640468:-	6:85636997:-	6:85619378:-	6:85615257:-	6:85615201:-	6:85615103:-	6:85612736:-	6:85612729:-	6:85612717:-	6:85612699:-	6:85612667:-	6:85612618:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	ArijeGVTwYBw WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8