General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000616243
Gene ID:	ENSG00000124785
Gene Name:	NRN1
Sequence (UNICHARACTER ENCODING)	GCGCGUUUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCUCGUGCGGGGGGCCGGGCUGCGUGCUCACGCGCUCCAGGCUGCGCCCAGAGCUCAGCUGCUGGGUUGGAGAAAAAGAGGGUCUGCGGUCGCAAAUGGUUUGACUAAACGUAGGAUGGGACUUAAGUUGAACGGCAGAUAUAUUUCACUGAUCCUCGCGGUGCAAAUAGCGUAUCUGGUGCAGGCCGUGAGAGCAGCGGGCAAGUGCGAUGCGGUCUUCAAGGGCUUUUCGGACUGUUUGCUCAAGCUGGGCGACAGCAUGGCCAACUACCCGCAGGGCCUGGACGACAAGACGAACAUCAAGACCGUGUGCACAUACUGGGAGGAUUUCCACAGCUGCACGGUCACAGCCCUUACGGAUUGCCAGGAAGGGGCGAAAGAUAUGUGGGAUAAACUGAGAAAAGAAUCCAAAAACCUCAACAPCCAAGGCAGCUUAUUCGAЖCUCUGCGGCAGCGGCAACGGGGCGGCGGGGUCCCUGCUCCCGGCGUUCCCGGUGCUCCUGGUGUCUCUCUCGGCAGCUPUAGCGACCUGGCUUUCCUUCUGAGCGUGGGGCCAGCUCCCCCCGCGCGCCCACCCACACUCACUCCAUGCUCCCGGAAAUCGAGAGGAAGAUCCAUUAGUUCUUUGGGGЖCGUUGUGAUUCUCUGUGAUGCUGAAAACACUCAUAUAGGЖUUGUGGGAAAUCCUGAUUCUCUUUUUUAUUUCGUUUGAUUUCUUGUGUUUUAUUUGCCAAAUGUUACCAAUCAGUGAGCAAGCAAGCACAGCCAAAAUCGGACCUCAGCUPUAGUCCGUCUUCACACACAAAUAAGAAAACGGCAAACCCACCCCAUUUUUUAAUUUUAUUAUUAUUAAUUUUUUUUGUUGGCAAAAGAAUCUCAGGAACGGCCCUGGGCCACCUACUAUAUUAAUCAUGCUAGUAACAUGAAAAAUGAUGGGCUCCPCCUAAUAGGAAGGCGAGGAGAGGAGAAGGCCAGGGGAAUGAAUUCAAGAGAGAUGUCCACGGACGAAACAUACGGUGAAUAAUUCACGCUCACGUCGUUCUUCCACAGUAUCUUGUUUUGAUCAUUUCCACUGCACAUUUCUCCUCAAGAAAAGCGAAAGGЖCAGЖCUGUUGGCUUUGUGUUUGGAGGAUAGGAGGGAGAGAGGGAAGGGGCUGAGGAAAUCUCUGGGGUAAGAGUAAAGGCUUCCAGAAGACAUGCUGCUAUGGUCACUGAGGGGUUAGCUPUAUCUGCUGUUGUUGAUGCAPCCGUCCAAGUUCACUGCCUPUAUUUUCCCUCCUCCCUCUUGUUUUAGCUGUUACACACACAGUAAUACCUGAAUAUCCAACGGUAUAGAUCACAAGGGGGGGAUGUUAAAUGUUAAUCUAAAAUAUAGCUAAAAAAAGAUUUUGACAUAAAAGAGCCUUGAUUUUAAAAAAAAAAGAGAGAGAGAUGUAAUUUAAAAAGUUUAUUAUAAAUUAAAUUCAGCAAAAAAAGAUUUGCUACAAAGUAUAGAGAAGUAUAAAAUAAAAGUUAUUGUUUG
Sequence (SHORT NAMES ENCODING)	GCGCGUUUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCUCGUGCGGGGGGCCGGGCUGCGUGCUCACGCGCUCCAGGCUGCGCCCAGAGCUCAGCUGCUGGGUUGGAGAAAAAGAGGGUCUGCGGUCGCAAAUGGUUUGACUAAACGUAGGAUGGGACUUAAGUUGAACGGCAGAUAUAUUUCACUGAUCCUCGCGGUGCAAAUAGCGUAUCUGGUGCAGGCCGUGAGAGCAGCGGGCAAGUGCGAUGCGGUCUUCAAGGGCUUUUCGGACUGUUUGCUCAAGCUGGGCGACAGCAUGGCCAACUACCCGCAGGGCCUGGACGACAAGACGAACAUCAAGACCGUGUGCACAUACUGGGAGGAUUUCCACAGCUGCACGGUCACAGCCCUUACGGAUUGCCAGGAAGGGGCGAAAGAUAUGUGGGAUAAACUGAGAAAAGAAUCCAAAAACCUCAACAYCCAAGGCAGCUUAUUCGAm6ACUCUGCGGCAGCGGCAACGGGGCGGCGGGGUCCCUGCUCCCGGCGUUCCCGGUGCUCCUGGUGUCUCUCUCGGCAGCUYUAGCGACCUGGCUUUCCUUCUGAGCGUGGGGCCAGCUCCCCCCGCGCGCCCACCCACACUCACUCCAUGCUCCCGGAAAUCGAGAGGAAGAUCCAUUAGUUCUUUGGGGm6ACGUUGUGAUUCUCUGUGAUGCUGAAAACACUCAUAUAGGm6AUUGUGGGAAAUCCUGAUUCUCUUUUUUAUUUCGUUUGAUUUCUUGUGUUUUAUUUGCCAAAUGUUACCAAUCAGUGAGCAAGCAAGCACAGCCAAAAUCGGACCUCAGCUYUAGUCCGUCUUCACACACAAAUAAGAAAACGGCAAACCCACCCCAUUUUUUAAUUUUAUUAUUAUUAAUUUUUUUUGUUGGCAAAAGAAUCUCAGGAACGGCCCUGGGCCACCUACUAUAUUAAUCAUGCUAGUAACAUGAAAAAUGAUGGGCUCCYCCUAAUAGGAAGGCGAGGAGAGGAGAAGGCCAGGGGAAUGAAUUCAAGAGAGAUGUCCACGGACGAAACAUACGGUGAAUAAUUCACGCUCACGUCGUUCUUCCACAGUAUCUUGUUUUGAUCAUUUCCACUGCACAUUUCUCCUCAAGAAAAGCGAAAGGm6ACAGm6ACUGUUGGCUUUGUGUUUGGAGGAUAGGAGGGAGAGAGGGAAGGGGCUGAGGAAAUCUCUGGGGUAAGAGUAAAGGCUUCCAGAAGACAUGCUGCUAUGGUCACUGAGGGGUUAGCUYUAUCUGCUGUUGUUGAUGCAYCCGUCCAAGUUCACUGCCUYUAUUUUCCCUCCUCCCUCUUGUUUUAGCUGUUACACACACAGUAAUACCUGAAUAUCCAACGGUAUAGAUCACAAGGGGGGGAUGUUAAAUGUUAAUCUAAAAUAUAGCUAAAAAAAGAUUUUGACAUAAAAGAGCCUUGAUUUUAAAAAAAAAAGAGAGAGAGAUGUAAUUUAAAAAGUUUAUUAUAAAUUAAAUUCAGCAAAAAAAGAUUUGCUACAAAGUAUAGAGAAGUAUAAAAUAAAAGUUAUUGUUUG
Sequence (MODOMICS CODE ENCODING)	GCGCGUUUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCUCGUGCGGGGGGCCGGGCUGCGUGCUCACGCGCUCCAGGCUGCGCCCAGAGCUCAGCUGCUGGGUUGGAGAAAAAGAGGGUCUGCGGUCGCAAAUGGUUUGACUAAACGUAGGAUGGGACUUAAGUUGAACGGCAGAUAUAUUUCACUGAUCCUCGCGGUGCAAAUAGCGUAUCUGGUGCAGGCCGUGAGAGCAGCGGGCAAGUGCGAUGCGGUCUUCAAGGGCUUUUCGGACUGUUUGCUCAAGCUGGGCGACAGCAUGGCCAACUACCCGCAGGGCCUGGACGACAAGACGAACAUCAAGACCGUGUGCACAUACUGGGAGGAUUUCCACAGCUGCACGGUCACAGCCCUUACGGAUUGCCAGGAAGGGGCGAAAGAUAUGUGGGAUAAACUGAGAAAAGAAUCCAAAAACCUCAACA2000000009UCCAAGGCAGCUUAUUCGA2000000006ACUCUGCGGCAGCGGCAACGGGGCGGCGGGGUCCCUGCUCCCGGCGUUCCCGGUGCUCCUGGUGUCUCUCUCGGCAGCU2000000009UUAGCGACCUGGCUUUCCUUCUGAGCGUGGGGCCAGCUCCCCCCGCGCGCCCACCCACACUCACUCCAUGCUCCCGGAAAUCGAGAGGAAGAUCCAUUAGUUCUUUGGGG2000000006ACGUUGUGAUUCUCUGUGAUGCUGAAAACACUCAUAUAGG2000000006AUUGUGGGAAAUCCUGAUUCUCUUUUUUAUUUCGUUUGAUUUCUUGUGUUUUAUUUGCCAAAUGUUACCAAUCAGUGAGCAAGCAAGCACAGCCAAAAUCGGACCUCAGCU2000000009UUAGUCCGUCUUCACACACAAAUAAGAAAACGGCAAACCCACCCCAUUUUUUAAUUUUAUUAUUAUUAAUUUUUUUUGUUGGCAAAAGAAUCUCAGGAACGGCCCUGGGCCACCUACUAUAUUAAUCAUGCUAGUAACAUGAAAAAUGAUGGGCUCC2000000009UCCUAAUAGGAAGGCGAGGAGAGGAGAAGGCCAGGGGAAUGAAUUCAAGAGAGAUGUCCACGGACGAAACAUACGGUGAAUAAUUCACGCUCACGUCGUUCUUCCACAGUAUCUUGUUUUGAUCAUUUCCACUGCACAUUUCUCCUCAAGAAAAGCGAAAGG2000000006ACAG2000000006ACUGUUGGCUUUGUGUUUGGAGGAUAGGAGGGAGAGAGGGAAGGGGCUGAGGAAAUCUCUGGGGUAAGAGUAAAGGCUUCCAGAAGACAUGCUGCUAUGGUCACUGAGGGGUUAGCU2000000009UUAUCUGCUGUUGUUGAUGCA2000000009UCCGUCCAAGUUCACUGCCU2000000009UUAUUUUCCCUCCUCCCUCUUGUUUUAGCUGUUACACACACAGUAAUACCUGAAUAUCCAACGGUAUAGAUCACAAGGGGGGGAUGUUAAAUGUUAAUCUAAAAUAUAGCUAAAAAAAGAUUUUGACAUAAAAGAGCCUUGAUUUUAAAAAAAAAAGAGAGAGAGAUGUAAUUUAAAAAGUUUAUUAUAAAUUAAAUUCAGCAAAAAAAGAUUUGCUACAAAGUAUAGAGAAGUAUAAAAUAAAAGUUAUUGUUUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	461	480	559	669	709	820	977	1139	1143	1260	1281	1301
Modification Positions	Y	m6A	Y	m6A	m6A	Y	Y	m6A	m6A	Y	Y	Y
Genomic Coordinates	6:5999097:-	6:5999078:-	6:5998999:-	6:5998889:-	6:5998849:-	6:5998738:-	6:5998581:-	6:5998419:-	6:5998415:-	6:5998298:-	6:5998277:-	6:5998257:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL	4HMi5ykupT9V 5aTkEfEpX8Xm gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BkoLW2CBToyL 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm gBgcfFQ5WN9C msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8