General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000370384
Gene ID:	ENSG00000135314
Gene Name:	KHDC1
Sequence (UNICHARACTER ENCODING)	GGCGGAAGAGGCGGGUCCAGGGCGGUGUAAUUAAGGCGCGGAGCCCAGACCCUCCUGCUACAGUGCCUCGGGCUUUCCUGGAGGCGGGCGGCGGGAUGCUGCUCCGUUCUCCGGGUCCUCUCCUCCGGUUCUUGUCGUUUGGUCACGCCCUCAGUUCAGUCGGUUAUUGGAAAACGAUCAAGGCCCAAAGAUGGUUUACGUGGCGUUGUGGAUGUUAUCACCGUUGUUUGGUGACCGAGCCUGGAGCUUGAGCCCUGGGЖCGUCUUGCCAGCCGCAUGUGGUCCCGUGCCCACUUCUCGCGGUGGCGCGUUAAUCCACCUAGЖCUGUGCAUUGGUCCAGUCUGGGUUGACCCCGACCCGAAGUGGCCCUUUCCUUCGCGUCCUGAACUUCGCUUCUCCGUCGGUGUCUGGUCUCUUCCCGCCGGCGGGCUCUGCGGUGGCGGGAGGAGCUGUACUACUCGUGCCUUAGCGCACCCUUACUUUCCCAGGCCAGAAACGCGAAAUGCUGUCGGCCUUCCAGAGGCUGUUCCGAGUCUUAUUUGUGAUUGAAACAGUCUCAGAAUACGGAGUCCUGAUCUUCAUUUAUGGAUGGCCCUUUCUCCAGACCCUUGCGAUGCUCCUGAUCGGGACAGUGUCUUUCCACCUUUGGAUCCGCAGAAAUCGAGAGAGAAACUCAAGGAGCGGAAAGACUAGAUGCCGAUCCAAAAGGUCGGAGCAGAGCAUGGACAUGGGAACGAGUGCUCUCAGCAAGAAGCCGUGGUGGACCCUGCCUCAAAACUUUCAUGCACCAAUGGUGUUUCACAUGGAAGAGGACCAGGAGGAGCUCAUCUUCGGGCAUGGUGACACAUACCUUCGCUGCAUUGAGGUGCACAGCCACACCCUUAUUCAGCUGGAGAGUUGGUUCACAGCUACAGGCCAGACUCGUGUGACUGUAGUCGGACCACACAGGGCAAGGCAGUGGCUGCUGCACAUGUUUUGUUGUGUGGGGAGCCAGGACUCCUAUCAUCAUGCUCGAGGCCUGGAGAUGCUGGAACGUGUCCGAAGCCAGCCUCUGACCAACGAUGACCUGGUCACCUCCAUUAGUGUGCCACCAUACACUGGAGACCUGUCUUUGGCUCCCAGGAUAAGUGGAACCGUGUGUCUUAGCGUUCCUCAGCCUUCCCCUUACCAAGUGAUUGGUUGUUCGGGUUUCCAUUUGAGUUCACUGUAUCCGUAAUUAAGGЖCUGAUCUCCCCUGGGAAGUGGGGAUGAGAGGAGAAAUCUUGGCUUCACUUUUGGUGAGAAAGACAUGAUAGACACUGAGGAAAGUUUGAЖCUUGUGGCCGGGACCUGUCCCUCUCAGGUCUUCUAGACAUGUCUGAGGGAAGUCUCUUGAAUGUAAGAAAGUGUUAUUGGCAAAGCAAUCCAAUAAAAUAAGCUACCUAUGAUGCAAA
Sequence (SHORT NAMES ENCODING)	GGCGGAAGAGGCGGGUCCAGGGCGGUGUAAUUAAGGCGCGGAGCCCAGACCCUCCUGCUACAGUGCCUCGGGCUUUCCUGGAGGCGGGCGGCGGGAUGCUGCUCCGUUCUCCGGGUCCUCUCCUCCGGUUCUUGUCGUUUGGUCACGCCCUCAGUUCAGUCGGUUAUUGGAAAACGAUCAAGGCCCAAAGAUGGUUUACGUGGCGUUGUGGAUGUUAUCACCGUUGUUUGGUGACCGAGCCUGGAGCUUGAGCCCUGGGm6ACGUCUUGCCAGCCGCAUGUGGUCCCGUGCCCACUUCUCGCGGUGGCGCGUUAAUCCACCUAGm6ACUGUGCAUUGGUCCAGUCUGGGUUGACCCCGACCCGAAGUGGCCCUUUCCUUCGCGUCCUGAACUUCGCUUCUCCGUCGGUGUCUGGUCUCUUCCCGCCGGCGGGCUCUGCGGUGGCGGGAGGAGCUGUACUACUCGUGCCUUAGCGCACCCUUACUUUCCCAGGCCAGAAACGCGAAAUGCUGUCGGCCUUCCAGAGGCUGUUCCGAGUCUUAUUUGUGAUUGAAACAGUCUCAGAAUACGGAGUCCUGAUCUUCAUUUAUGGAUGGCCCUUUCUCCAGACCCUUGCGAUGCUCCUGAUCGGGACAGUGUCUUUCCACCUUUGGAUCCGCAGAAAUCGAGAGAGAAACUCAAGGAGCGGAAAGACUAGAUGCCGAUCCAAAAGGUCGGAGCAGAGCAUGGACAUGGGAACGAGUGCUCUCAGCAAGAAGCCGUGGUGGACCCUGCCUCAAAACUUUCAUGCACCAAUGGUGUUUCACAUGGAAGAGGACCAGGAGGAGCUCAUCUUCGGGCAUGGUGACACAUACCUUCGCUGCAUUGAGGUGCACAGCCACACCCUUAUUCAGCUGGAGAGUUGGUUCACAGCUACAGGCCAGACUCGUGUGACUGUAGUCGGACCACACAGGGCAAGGCAGUGGCUGCUGCACAUGUUUUGUUGUGUGGGGAGCCAGGACUCCUAUCAUCAUGCUCGAGGCCUGGAGAUGCUGGAACGUGUCCGAAGCCAGCCUCUGACCAACGAUGACCUGGUCACCUCCAUUAGUGUGCCACCAUACACUGGAGACCUGUCUUUGGCUCCCAGGAUAAGUGGAACCGUGUGUCUUAGCGUUCCUCAGCCUUCCCCUUACCAAGUGAUUGGUUGUUCGGGUUUCCAUUUGAGUUCACUGUAUCCGUAAUUAAGGm6ACUGAUCUCCCCUGGGAAGUGGGGAUGAGAGGAGAAAUCUUGGCUUCACUUUUGGUGAGAAAGACAUGAUAGACACUGAGGAAAGUUUGAm6ACUUGUGGCCGGGACCUGUCCCUCUCAGGUCUUCUAGACAUGUCUGAGGGAAGUCUCUUGAAUGUAAGAAAGUGUUAUUGGCAAAGCAAUCCAAUAAAAUAAGCUACCUAUGAUGCAAA
Sequence (MODOMICS CODE ENCODING)	GGCGGAAGAGGCGGGUCCAGGGCGGUGUAAUUAAGGCGCGGAGCCCAGACCCUCCUGCUACAGUGCCUCGGGCUUUCCUGGAGGCGGGCGGCGGGAUGCUGCUCCGUUCUCCGGGUCCUCUCCUCCGGUUCUUGUCGUUUGGUCACGCCCUCAGUUCAGUCGGUUAUUGGAAAACGAUCAAGGCCCAAAGAUGGUUUACGUGGCGUUGUGGAUGUUAUCACCGUUGUUUGGUGACCGAGCCUGGAGCUUGAGCCCUGGG2000000006ACGUCUUGCCAGCCGCAUGUGGUCCCGUGCCCACUUCUCGCGGUGGCGCGUUAAUCCACCUAG2000000006ACUGUGCAUUGGUCCAGUCUGGGUUGACCCCGACCCGAAGUGGCCCUUUCCUUCGCGUCCUGAACUUCGCUUCUCCGUCGGUGUCUGGUCUCUUCCCGCCGGCGGGCUCUGCGGUGGCGGGAGGAGCUGUACUACUCGUGCCUUAGCGCACCCUUACUUUCCCAGGCCAGAAACGCGAAAUGCUGUCGGCCUUCCAGAGGCUGUUCCGAGUCUUAUUUGUGAUUGAAACAGUCUCAGAAUACGGAGUCCUGAUCUUCAUUUAUGGAUGGCCCUUUCUCCAGACCCUUGCGAUGCUCCUGAUCGGGACAGUGUCUUUCCACCUUUGGAUCCGCAGAAAUCGAGAGAGAAACUCAAGGAGCGGAAAGACUAGAUGCCGAUCCAAAAGGUCGGAGCAGAGCAUGGACAUGGGAACGAGUGCUCUCAGCAAGAAGCCGUGGUGGACCCUGCCUCAAAACUUUCAUGCACCAAUGGUGUUUCACAUGGAAGAGGACCAGGAGGAGCUCAUCUUCGGGCAUGGUGACACAUACCUUCGCUGCAUUGAGGUGCACAGCCACACCCUUAUUCAGCUGGAGAGUUGGUUCACAGCUACAGGCCAGACUCGUGUGACUGUAGUCGGACCACACAGGGCAAGGCAGUGGCUGCUGCACAUGUUUUGUUGUGUGGGGAGCCAGGACUCCUAUCAUCAUGCUCGAGGCCUGGAGAUGCUGGAACGUGUCCGAAGCCAGCCUCUGACCAACGAUGACCUGGUCACCUCCAUUAGUGUGCCACCAUACACUGGAGACCUGUCUUUGGCUCCCAGGAUAAGUGGAACCGUGUGUCUUAGCGUUCCUCAGCCUUCCCCUUACCAAGUGAUUGGUUGUUCGGGUUUCCAUUUGAGUUCACUGUAUCCGUAAUUAAGG2000000006ACUGAUCUCCCCUGGGAAGUGGGGAUGAGAGGAGAAAUCUUGGCUUCACUUUUGGUGAGAAAGACAUGAUAGACACUGAGGAAAGUUUGA2000000006ACUUGUGGCCGGGACCUGUCCCUCUCAGGUCUUCUAGACAUGUCUGAGGGAAGUCUCUUGAAUGUAAGAAAGUGUUAUUGGCAAAGCAAUCCAAUAAAAUAAGCUACCUAUGAUGCAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	260	323	1222	1312
Modification Positions	m6A	m6A	m6A	m6A
Genomic Coordinates	6:73309956:-	6:73309893:-	6:73241522:-	6:73241432:-
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BsCW7emuRX7M Lny8GcCeVGc9	Lny8GcCeVGc9 BtsJQJ3DteUq	msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq	msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq iezFbUdmY3A6