General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000375356
Gene ID:	ENSG00000204348
Gene Name:	DXO
Sequence (UNICHARACTER ENCODING)	GGCGUGCCUGCCAUGACGUCAUAGCUCUGCGGAGGUGGAAGUUGGGGAGCUUUGAGGUAACUGGAUUCUUGAUCUGAGCGCAGACGUCCUUCCUAACCUCACUGCAUUUGGAGGЖCCUGGAGGGAGGGUGGGUGAAGGGCAAGGAAAGAGGCAGGAUGAGAGCUUGGCCGCGGUGGCGUCUGAGGGGCCUGAAUGUUUCAAGGCCAGAGCCUGGCGAUCAGGUGGCUCGCUUAGUCCUAAACCAGUCAUCCUUCUCCAGGCCUCCUCUGUAGAAUGGAAACUCUGUACCCCUGCUUGUCUUAGGACCUCAUGGAUCCCAGGGGGACCAAGAGAGGAGCUGAGAAGACAGAGGUAGCUGAGCCUCGGAACAAЖCUACCUCGUCCAGCACCUUCUCUGCCCACAGЖCCCUGCCCUCUACUCUGGGCCCUUUCCUUUCUACCGGCGCCCUUCGGAACUGGGCUGCUUCUCCCUGGAUGCUCAACGCCAGUACCAUGGAGAUGCCCGAGCCCUGCGCUACUAUAGCCCACCCCCCACUAACGGUCCAGGCCCCAACUUUGACCUCAGAGACGGAUACCCGGAUCGAUACCAGCCCCGGGACGAGGAGGUCCAGGAAAGGCUGGACCACCUGCUGUGCUGGCUCCUGGAACACCGAGGCCGGUUGGAGGGGGGUCCAGGCUGGCUGGCAGAGGCCAUAGUGACGUGGCGGGGGCACCUGACAAAACUGCUGACGACACCGUAUGAGCGGCAGGAGGGCUGGCAGCUGGCAGCCUCCCGGUUCCAGGGAACACUAUACCUGAGUGAAGUGGAGACACCGAACGCUCGGGCCCAGAGGCUUGCUCGGCCACCGCUCCPCCGGGAGCUUAUGUACAUGGGAUACAAAUUUGAGCAGUACAUGUGUGCAGACAAACCUGGAAGCUCCCCAGACCCCUCUGGGGAGGUUAЖCACCAACGUGGCCUUCUGCUCUGUGCUACGCAGCCGCCUGGGAAGCCACCCUCUGCUCUUCUCAGGGGAGGUAGACUGCACAGACCCCCAAGCCCCAPCCACACAGCCCCCAACCUGCUAUGUGGAGCUCAAGACCUCCAAGGAGAUGCACAGCCCUGGCCAAUGGAGGAGUUUCUACЖGACACAAGCUCCUGAAAUGGUGGGCUCAGUCAUUCCUCCCAGGGGUCCCGAAUGUUGUUGCUGGCUUCCGUAACCCAGACGGUUUUGUCUCUUCCCUCAAGACCUUUCCUACCAUGAAGAUGUUUGAAUAUGUCAGGAAUGACCGUGACGGCUGGAAUCCCUCUGUGUGCAUGAACUUCUGUGCCGCCUUCCUUAGCUUUGCCCAGAGCACGGUUGUCCAGGAUGACCCCAGGCUCGUUCAUCUCUUCUCUUGGGAGCCUGGCGGCCCAGUCACCGUGUCUGUACACCAAGAUGCACCUUACGCCUUCCUGCCCAUAUGGUAUGUGGAAGCUAUGACUCAGGACCUCCCAUCACCCCCCAAGACUCCCUCUCCCAAAUAGUAAUGCUPUAGAGGGAGGCAGUCAUAUCUCUGU
Sequence (SHORT NAMES ENCODING)	GGCGUGCCUGCCAUGACGUCAUAGCUCUGCGGAGGUGGAAGUUGGGGAGCUUUGAGGUAACUGGAUUCUUGAUCUGAGCGCAGACGUCCUUCCUAACCUCACUGCAUUUGGAGGm6ACCUGGAGGGAGGGUGGGUGAAGGGCAAGGAAAGAGGCAGGAUGAGAGCUUGGCCGCGGUGGCGUCUGAGGGGCCUGAAUGUUUCAAGGCCAGAGCCUGGCGAUCAGGUGGCUCGCUUAGUCCUAAACCAGUCAUCCUUCUCCAGGCCUCCUCUGUAGAAUGGAAACUCUGUACCCCUGCUUGUCUUAGGACCUCAUGGAUCCCAGGGGGACCAAGAGAGGAGCUGAGAAGACAGAGGUAGCUGAGCCUCGGAACAAm6ACUACCUCGUCCAGCACCUUCUCUGCCCACAGm6ACCCUGCCCUCUACUCUGGGCCCUUUCCUUUCUACCGGCGCCCUUCGGAACUGGGCUGCUUCUCCCUGGAUGCUCAACGCCAGUACCAUGGAGAUGCCCGAGCCCUGCGCUACUAUAGCCCACCCCCCACUAACGGUCCAGGCCCCAACUUUGACCUCAGAGACGGAUACCCGGAUCGAUACCAGCCCCGGGACGAGGAGGUCCAGGAAAGGCUGGACCACCUGCUGUGCUGGCUCCUGGAACACCGAGGCCGGUUGGAGGGGGGUCCAGGCUGGCUGGCAGAGGCCAUAGUGACGUGGCGGGGGCACCUGACAAAACUGCUGACGACACCGUAUGAGCGGCAGGAGGGCUGGCAGCUGGCAGCCUCCCGGUUCCAGGGAACACUAUACCUGAGUGAAGUGGAGACACCGAACGCUCGGGCCCAGAGGCUUGCUCGGCCACCGCUCCYCCGGGAGCUUAUGUACAUGGGAUACAAAUUUGAGCAGUACAUGUGUGCAGACAAACCUGGAAGCUCCCCAGACCCCUCUGGGGAGGUUAm6ACACCAACGUGGCCUUCUGCUCUGUGCUACGCAGCCGCCUGGGAAGCCACCCUCUGCUCUUCUCAGGGGAGGUAGACUGCACAGACCCCCAAGCCCCAYCCACACAGCCCCCAACCUGCUAUGUGGAGCUCAAGACCUCCAAGGAGAUGCACAGCCCUGGCCAAUGGAGGAGUUUCUACm6AGACACAAGCUCCUGAAAUGGUGGGCUCAGUCAUUCCUCCCAGGGGUCCCGAAUGUUGUUGCUGGCUUCCGUAACCCAGACGGUUUUGUCUCUUCCCUCAAGACCUUUCCUACCAUGAAGAUGUUUGAAUAUGUCAGGAAUGACCGUGACGGCUGGAAUCCCUCUGUGUGCAUGAACUUCUGUGCCGCCUUCCUUAGCUUUGCCCAGAGCACGGUUGUCCAGGAUGACCCCAGGCUCGUUCAUCUCUUCUCUUGGGAGCCUGGCGGCCCAGUCACCGUGUCUGUACACCAAGAUGCACCUUACGCCUUCCUGCCCAUAUGGUAUGUGGAAGCUAUGACUCAGGACCUCCCAUCACCCCCCAAGACUCCCUCUCCCAAAUAGUAAUGCUYUAGAGGGAGGCAGUCAUAUCUCUGU
Sequence (MODOMICS CODE ENCODING)	GGCGUGCCUGCCAUGACGUCAUAGCUCUGCGGAGGUGGAAGUUGGGGAGCUUUGAGGUAACUGGAUUCUUGAUCUGAGCGCAGACGUCCUUCCUAACCUCACUGCAUUUGGAGG2000000006ACCUGGAGGGAGGGUGGGUGAAGGGCAAGGAAAGAGGCAGGAUGAGAGCUUGGCCGCGGUGGCGUCUGAGGGGCCUGAAUGUUUCAAGGCCAGAGCCUGGCGAUCAGGUGGCUCGCUUAGUCCUAAACCAGUCAUCCUUCUCCAGGCCUCCUCUGUAGAAUGGAAACUCUGUACCCCUGCUUGUCUUAGGACCUCAUGGAUCCCAGGGGGACCAAGAGAGGAGCUGAGAAGACAGAGGUAGCUGAGCCUCGGAACAA2000000006ACUACCUCGUCCAGCACCUUCUCUGCCCACAG2000000006ACCCUGCCCUCUACUCUGGGCCCUUUCCUUUCUACCGGCGCCCUUCGGAACUGGGCUGCUUCUCCCUGGAUGCUCAACGCCAGUACCAUGGAGAUGCCCGAGCCCUGCGCUACUAUAGCCCACCCCCCACUAACGGUCCAGGCCCCAACUUUGACCUCAGAGACGGAUACCCGGAUCGAUACCAGCCCCGGGACGAGGAGGUCCAGGAAAGGCUGGACCACCUGCUGUGCUGGCUCCUGGAACACCGAGGCCGGUUGGAGGGGGGUCCAGGCUGGCUGGCAGAGGCCAUAGUGACGUGGCGGGGGCACCUGACAAAACUGCUGACGACACCGUAUGAGCGGCAGGAGGGCUGGCAGCUGGCAGCCUCCCGGUUCCAGGGAACACUAUACCUGAGUGAAGUGGAGACACCGAACGCUCGGGCCCAGAGGCUUGCUCGGCCACCGCUCC2000000009UCCGGGAGCUUAUGUACAUGGGAUACAAAUUUGAGCAGUACAUGUGUGCAGACAAACCUGGAAGCUCCCCAGACCCCUCUGGGGAGGUUA2000000006ACACCAACGUGGCCUUCUGCUCUGUGCUACGCAGCCGCCUGGGAAGCCACCCUCUGCUCUUCUCAGGGGAGGUAGACUGCACAGACCCCCAAGCCCCA2000000009UCCACACAGCCCCCAACCUGCUAUGUGGAGCUCAAGACCUCCAAGGAGAUGCACAGCCCUGGCCAAUGGAGGAGUUUCUAC2000000006AGACACAAGCUCCUGAAAUGGUGGGCUCAGUCAUUCCUCCCAGGGGUCCCGAAUGUUGUUGCUGGCUUCCGUAACCCAGACGGUUUUGUCUCUUCCCUCAAGACCUUUCCUACCAUGAAGAUGUUUGAAUAUGUCAGGAAUGACCGUGACGGCUGGAAUCCCUCUGUGUGCAUGAACUUCUGUGCCGCCUUCCUUAGCUUUGCCCAGAGCACGGUUGUCCAGGAUGACCCCAGGCUCGUUCAUCUCUUCUCUUGGGAGCCUGGCGGCCCAGUCACCGUGUCUGUACACCAAGAUGCACCUUACGCCUUCCUGCCCAUAUGGUAUGUGGAAGCUAUGACUCAGGACCUCCCAUCACCCCCCAAGACUCCCUCUCCCAAAUAGUAAUGCU2000000009UUAGAGGGAGGCAGUCAUAUCUCUGU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	115	372	404	851	941	1039	1120	1508
Modification Positions	m6A	m6A	m6A	Y	m6A	Y	m6A	Y
Genomic Coordinates	6:31971870:-	6:31971613:-	6:31971581:-	6:31970962:-	6:31970786:-	6:31970688:-	6:31970607:-	6:31969869:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	NjZ8bGGJsNSR BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5aTkEfEpX8Xm aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8