General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000399751
Gene ID:	ENSG00000290555
Gene Name:	LINC00680
Sequence (UNICHARACTER ENCODING)	GUCGCUGUGGCUGGUUCUGCGGUGUGCGGCCAGCCAUGGAGCGCUCUGGGCCCAGCGAAGUGACAGGCUCAGACGCAUCGGGACCGGACCCGCAGCUUGUGGUCACCAUGGGCUUCACGGGGUUCGGGGUUCGGUAAAAAAGCUCACACAUUUGACUUGGAAGCAAUGUUUGAACAAACUCAAAGAACAGCUGUGGAAAGAAGUCACAAAACACUGGGCCACCAGGAACACACCUGUAGCCCAGCAAAGUUGAGGCCAUCGACUGGCUCAUCACAACAAGGAAGGCUGUGCACCACUGGGACCCAGCAGCAGCUCAGCAGCAGCAGUGAGAGGGCCUUGGGAAAGACUUGGAGGGUUUGGCUUAUACAAGACCAGAUUACAGAGGGGUAUUGAUUUGCCUUGCCCCCGCCCCCACCAUCACAGUGUGUCCCUGUCCAGUGUUGGUGCUGUGUGGCAUUGCUUGUGUCCAUAGGAGUCCAUCAAGGCAGAGCGGCAGAGCGGCAAGCAGAGCGGCAAGGCAGUUCAACCCAAUGGAAAUGGAUUGAAAGAGUGAAAGUCACUGGUCUCAAAGAAUCUACGGAAUUUAGCAUUUUGAAAAUCACAGAGCAAUUUUGGGUAGGUAUUCACAUGCACUAAAAAACCAGGCAAACAUCUGACUCCCAGGAUAAAGUGACUGAGAGCAGUAGAAGACUUGUUGAGCCUUAAGGAAUAAGAGGAAAAUUAUGUUAUGAAGUGCAGGAACAGCACAGЖCCCAGACGAGGGGAUGCAGCCCGGAGCCAGUAACCCGGCGCCUCCUCCUCCCCAGGGCGCAGCGCUGGCUGCUCCCCGGAUACCGUGAUCACACGUCCCAGGUCCUGAGAGCGCCUCAUAGGUAGACAGUUCUUUGGGЖCUUUUGGGACGCAGCACUUGAAGAGAGGUUUACCUAAACUUUCCPCCUGGGAGCCUGUCAUCAUUUGAAAGUAACAGAAGAAAGCUGUCAGGCUGAGGAAAGUUUCAACAGGCACUUGGUGAGAAUGGGAAGCAPCCAUUCAUUGGGAAAUCACGGGGACAGAGGAGGAAUUCACGGGAUCAGAGCACUGAGAAACUCCAGAGGCUUCUGGUUCACCGCCCUGAUUCCACAGAUGUGGGUCAGAGGCAGAGAUGGAAGUUGGAAUGGЖCAAGCCUGCCCUCUCCUCAGCUCUCCAUGGCUCUGUCCUCAGGCUGUUUCUGCAAUUUGACAUGAGGCCUGGCCCCAGGGAAACCAGUGGGGCCUCAUCUCCUCCCUGUGCUGCUCUGAGGUGGAGCCUUCUCAGGGUCAGUCCAGCUCUGGAGCCCCUCUCCAGCUCGGUCACCAAAGCUGUCUGGUCCCAGGGCAGUGUGGAGUGACAGGCACGCCAGCCAAUCCAAUCGGCCAUUUCAUACCCAAUGCAUGUGЖCUGAUAAAGAGAUAЖCACCCUGUCUCCAAGACACAGGCUPUACAUAAACAGCUPUAAUGACUUCUUCACUUAGGGACAAGЖCUCCUUAGUGGUGGAACCUCAGGCAPCCAUGCAGGAUGUAAGAAAGCUCCCGUAUAUACAUGAЖCUGAGAAGUGUGUAGAAGAGUAAAUACUGUAAUAGGUAAUAAAAUGUAUGUAUUUUUAUUUA
Sequence (SHORT NAMES ENCODING)	GUCGCUGUGGCUGGUUCUGCGGUGUGCGGCCAGCCAUGGAGCGCUCUGGGCCCAGCGAAGUGACAGGCUCAGACGCAUCGGGACCGGACCCGCAGCUUGUGGUCACCAUGGGCUUCACGGGGUUCGGGGUUCGGUAAAAAAGCUCACACAUUUGACUUGGAAGCAAUGUUUGAACAAACUCAAAGAACAGCUGUGGAAAGAAGUCACAAAACACUGGGCCACCAGGAACACACCUGUAGCCCAGCAAAGUUGAGGCCAUCGACUGGCUCAUCACAACAAGGAAGGCUGUGCACCACUGGGACCCAGCAGCAGCUCAGCAGCAGCAGUGAGAGGGCCUUGGGAAAGACUUGGAGGGUUUGGCUUAUACAAGACCAGAUUACAGAGGGGUAUUGAUUUGCCUUGCCCCCGCCCCCACCAUCACAGUGUGUCCCUGUCCAGUGUUGGUGCUGUGUGGCAUUGCUUGUGUCCAUAGGAGUCCAUCAAGGCAGAGCGGCAGAGCGGCAAGCAGAGCGGCAAGGCAGUUCAACCCAAUGGAAAUGGAUUGAAAGAGUGAAAGUCACUGGUCUCAAAGAAUCUACGGAAUUUAGCAUUUUGAAAAUCACAGAGCAAUUUUGGGUAGGUAUUCACAUGCACUAAAAAACCAGGCAAACAUCUGACUCCCAGGAUAAAGUGACUGAGAGCAGUAGAAGACUUGUUGAGCCUUAAGGAAUAAGAGGAAAAUUAUGUUAUGAAGUGCAGGAACAGCACAGm6ACCCAGACGAGGGGAUGCAGCCCGGAGCCAGUAACCCGGCGCCUCCUCCUCCCCAGGGCGCAGCGCUGGCUGCUCCCCGGAUACCGUGAUCACACGUCCCAGGUCCUGAGAGCGCCUCAUAGGUAGACAGUUCUUUGGGm6ACUUUUGGGACGCAGCACUUGAAGAGAGGUUUACCUAAACUUUCCYCCUGGGAGCCUGUCAUCAUUUGAAAGUAACAGAAGAAAGCUGUCAGGCUGAGGAAAGUUUCAACAGGCACUUGGUGAGAAUGGGAAGCAYCCAUUCAUUGGGAAAUCACGGGGACAGAGGAGGAAUUCACGGGAUCAGAGCACUGAGAAACUCCAGAGGCUUCUGGUUCACCGCCCUGAUUCCACAGAUGUGGGUCAGAGGCAGAGAUGGAAGUUGGAAUGGm6ACAAGCCUGCCCUCUCCUCAGCUCUCCAUGGCUCUGUCCUCAGGCUGUUUCUGCAAUUUGACAUGAGGCCUGGCCCCAGGGAAACCAGUGGGGCCUCAUCUCCUCCCUGUGCUGCUCUGAGGUGGAGCCUUCUCAGGGUCAGUCCAGCUCUGGAGCCCCUCUCCAGCUCGGUCACCAAAGCUGUCUGGUCCCAGGGCAGUGUGGAGUGACAGGCACGCCAGCCAAUCCAAUCGGCCAUUUCAUACCCAAUGCAUGUGm6ACUGAUAAAGAGAUAm6ACACCCUGUCUCCAAGACACAGGCUYUACAUAAACAGCUYUAAUGACUUCUUCACUUAGGGACAAGm6ACUCCUUAGUGGUGGAACCUCAGGCAYCCAUGCAGGAUGUAAGAAAGCUCCCGUAUAUACAUGAm6ACUGAGAAGUGUGUAGAAGAGUAAAUACUGUAAUAGGUAAUAAAAUGUAUGUAUUUUUAUUUA
Sequence (MODOMICS CODE ENCODING)	GUCGCUGUGGCUGGUUCUGCGGUGUGCGGCCAGCCAUGGAGCGCUCUGGGCCCAGCGAAGUGACAGGCUCAGACGCAUCGGGACCGGACCCGCAGCUUGUGGUCACCAUGGGCUUCACGGGGUUCGGGGUUCGGUAAAAAAGCUCACACAUUUGACUUGGAAGCAAUGUUUGAACAAACUCAAAGAACAGCUGUGGAAAGAAGUCACAAAACACUGGGCCACCAGGAACACACCUGUAGCCCAGCAAAGUUGAGGCCAUCGACUGGCUCAUCACAACAAGGAAGGCUGUGCACCACUGGGACCCAGCAGCAGCUCAGCAGCAGCAGUGAGAGGGCCUUGGGAAAGACUUGGAGGGUUUGGCUUAUACAAGACCAGAUUACAGAGGGGUAUUGAUUUGCCUUGCCCCCGCCCCCACCAUCACAGUGUGUCCCUGUCCAGUGUUGGUGCUGUGUGGCAUUGCUUGUGUCCAUAGGAGUCCAUCAAGGCAGAGCGGCAGAGCGGCAAGCAGAGCGGCAAGGCAGUUCAACCCAAUGGAAAUGGAUUGAAAGAGUGAAAGUCACUGGUCUCAAAGAAUCUACGGAAUUUAGCAUUUUGAAAAUCACAGAGCAAUUUUGGGUAGGUAUUCACAUGCACUAAAAAACCAGGCAAACAUCUGACUCCCAGGAUAAAGUGACUGAGAGCAGUAGAAGACUUGUUGAGCCUUAAGGAAUAAGAGGAAAAUUAUGUUAUGAAGUGCAGGAACAGCACAG2000000006ACCCAGACGAGGGGAUGCAGCCCGGAGCCAGUAACCCGGCGCCUCCUCCUCCCCAGGGCGCAGCGCUGGCUGCUCCCCGGAUACCGUGAUCACACGUCCCAGGUCCUGAGAGCGCCUCAUAGGUAGACAGUUCUUUGGG2000000006ACUUUUGGGACGCAGCACUUGAAGAGAGGUUUACCUAAACUUUCC2000000009UCCUGGGAGCCUGUCAUCAUUUGAAAGUAACAGAAGAAAGCUGUCAGGCUGAGGAAAGUUUCAACAGGCACUUGGUGAGAAUGGGAAGCA2000000009UCCAUUCAUUGGGAAAUCACGGGGACAGAGGAGGAAUUCACGGGAUCAGAGCACUGAGAAACUCCAGAGGCUUCUGGUUCACCGCCCUGAUUCCACAGAUGUGGGUCAGAGGCAGAGAUGGAAGUUGGAAUGG2000000006ACAAGCCUGCCCUCUCCUCAGCUCUCCAUGGCUCUGUCCUCAGGCUGUUUCUGCAAUUUGACAUGAGGCCUGGCCCCAGGGAAACCAGUGGGGCCUCAUCUCCUCCCUGUGCUGCUCUGAGGUGGAGCCUUCUCAGGGUCAGUCCAGCUCUGGAGCCCCUCUCCAGCUCGGUCACCAAAGCUGUCUGGUCCCAGGGCAGUGUGGAGUGACAGGCACGCCAGCCAAUCCAAUCGGCCAUUUCAUACCCAAUGCAUGUG2000000006ACUGAUAAAGAGAUA2000000006ACACCCUGUCUCCAAGACACAGGCU2000000009UUACAUAAACAGCU2000000009UUAAUGACUUCUUCACUUAGGGACAAG2000000006ACUCCUUAGUGGUGGAACCUCAGGCA2000000009UCCAUGCAGGAUGUAAGAAAGCUCCCGUAUAUACAUGA2000000006ACUGAGAAGUGUGUAGAAGAGUAAAUACUGUAAUAGGUAAUAAAAUGUAUGUAUUUUUAUUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	750	889	934	1024	1157	1414	1429	1454	1468	1495	1521	1559
Modification Positions	m6A	m6A	Y	Y	m6A	m6A	m6A	Y	Y	m6A	Y	m6A
Genomic Coordinates	6:57946949:-	6:57946810:-	6:57946765:-	6:57946675:-	6:57946542:-	6:57946285:-	6:57946270:-	6:57946245:-	6:57946231:-	6:57946204:-	6:57946178:-	6:57946140:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb Mg9GixDBFQAT BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb VyCX26p5UBRL Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	aHkqKEJkRYyb Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8