General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000519108
Gene ID:	ENSG00000196591
Gene Name:	HDAC2
Sequence (UNICHARACTER ENCODING)	GUUCCCGGCCCGGCACAGUUAGAACGAGACCCUCUUCCUGGCGCAGCCCCCGCGGUUCCUGCGGGCGGGAAUCAGGGGGCCCGCCCGUCUUGUCUCCUGCCUCUCCCCCUUCGGCCGUGCAGUCCGCAGCCUCGAAGGUGGCCGCCGCUGGGGACGGCGCCGGCCUACCCCGCCUUGGUGGUGGCGGCGGCGAAGGGGGCGGCCCAUUCUCUCCCUUCUCCCGCCCACCAUUCGUGGCAACGCAGGUGAUAUUGGAAAUUAUUAUUAUGGACAGGGUCAPCCCAUGAAGCCUCAUAGAAUCCGCAUGACCCAUAЖCUUGCUGUUAAAUUAUGGCUUAUACЖGAAAAAUGGAAAUAUAUAGGCCCCAUAAAGCCACUGCCGAAGAAAUGACAAAAUAUCACAGUGAUGAGUAUAUCAAAUUUCUACGGUCAAUAAGACCAGAUAЖCAUGUCUGAGUAUAGUAAGCAGAUGCAGAGAUUUAAUGUUGGAGAAGAUUGUCCAGUGUUUGAUGGACUCUUUGAGUUUUGUCAGCUCUCAACUGGCGGUUCAGUUGCUGGAGCUGUGAAGUUAAЖCCGACAACAGACUGAUAUGGCUGUUAAUUGGGCUGGAGGAUUACAUCAUGCUAAGAAAUCAGAAGCAUCAGGAUUCUGUUACGUUAAUGAUAUUGUGCUUGCCAPCCUUGAAUUACUAAAGUAUCAUCAGAGAGUCUUAUAUAUUGAUAUAGAUAUUCAUCAUGGUGAUGGUGUUGAAGAAGCUUUUUAUACAACAGAUCGUGUAAUGACGGUAUCAUUCCAUAAAUAUGGGGAAUACUUUCCUGGCACAGGAGACUUGAGGGAUAUUGGUGCUGGAAAAGGCAAAUACUAUGCUGUCAAUUUUCCAAUGAGAGAUGGUAUAGAUGAUGAGUCAUAUGGGCAGAUAUUUAAGCCUAUUAUCUCAAAGGUGAUGGAGAUGUAUCAACCUAGUGCUGUGGUAUUACAGUGUGGUGCAGACUCAUUAUCUGGUGAUAGACUGGGUUGUUUCAAUCUAЖCAGUCAAAGGUCAUGCUAAAUGUGUAGAAGUUGUAAAAACUUUUAЖCUUACCAUUACUGAUGCUUGGAGGAGGUGGCUACACAAUCCGUAAUGUUGCUCGAUGUUGGACAUAUGAGACUGCAGUUGCCCUUGAUUGUGAGAUUCCCAAUGAGUUGCCAUAUAAUGAUUACUUUGAGUAUUUUGGACCAGACUUCAAЖCUGCAUAUUAGUCCUUCAAACAUGACAAACCAGAACACUCCAGAAUAUAUGGAAAAGAUAAAACAGCGUUUGUUUGAAAAUUUGCGCAUGUUACCUCAUGCACCUGGUGUCCAGAUGCAAGCUAUUCCAGAAGAUGCUGUUCAUGAAGACAGUGGAGAUGAAGAUGGAGAAGAUCCAGACAAGAGAAUUUCUAUUCGAGCAUCAGACAAGCGGAUAGCUUGUGAUGAAGAAUUCUCAGAUUCUGAGGAUGAAGGAGAAGGAGGUCGAAGAAAUGUGGCUGAUCAUAAGAAAGGAGCAAAGAAAGCUAGAAUUGAAGAAGAUAAGAAAGAAACAGAGGACAAAAAAACAGACGUUAAGGAAGAAGAUAAAUCCAAGGACAACAGUGGUGAAAAAACAGAUACCAAAGGAACCAAAUCAGAACAGCUCAGCAACCCCUGAAUUUGACAGUCUCACCAAUUUCAGAAAAUCAUUAAAAAGAAAAUAUUGAAAGGAAAAUGUUUUCUUUUUGAAGACUUCUGGCUUCAUUUUAUACUACUUUGGCAUGGЖCUGUAUUUAUUUUCAAAUGGCUUUUUCGUUUUUGUUUUUCUUGGCAAGUUUUAUUGUGAGUUUUUCUAAUUAUGAAGCAAAAUUUCUUUUCUCCACCAUGCUPUAUGUGAUAGUAUUUAAAAUUGAUGUGAGUUAUUAUGUCAAAAAAACUGAUCUAUUAAAGAAGUAAUUGGCCUUUCUGAGCUGAUUUUUCCAUCUUUUGUAAUUAUCUPUAUUAAAAAЖUUGUACUUGG
Sequence (SHORT NAMES ENCODING)	GUUCCCGGCCCGGCACAGUUAGAACGAGACCCUCUUCCUGGCGCAGCCCCCGCGGUUCCUGCGGGCGGGAAUCAGGGGGCCCGCCCGUCUUGUCUCCUGCCUCUCCCCCUUCGGCCGUGCAGUCCGCAGCCUCGAAGGUGGCCGCCGCUGGGGACGGCGCCGGCCUACCCCGCCUUGGUGGUGGCGGCGGCGAAGGGGGCGGCCCAUUCUCUCCCUUCUCCCGCCCACCAUUCGUGGCAACGCAGGUGAUAUUGGAAAUUAUUAUUAUGGACAGGGUCAYCCCAUGAAGCCUCAUAGAAUCCGCAUGACCCAUAm6ACUUGCUGUUAAAUUAUGGCUUAUACm6AGAAAAAUGGAAAUAUAUAGGCCCCAUAAAGCCACUGCCGAAGAAAUGACAAAAUAUCACAGUGAUGAGUAUAUCAAAUUUCUACGGUCAAUAAGACCAGAUAm6ACAUGUCUGAGUAUAGUAAGCAGAUGCAGAGAUUUAAUGUUGGAGAAGAUUGUCCAGUGUUUGAUGGACUCUUUGAGUUUUGUCAGCUCUCAACUGGCGGUUCAGUUGCUGGAGCUGUGAAGUUAAm6ACCGACAACAGACUGAUAUGGCUGUUAAUUGGGCUGGAGGAUUACAUCAUGCUAAGAAAUCAGAAGCAUCAGGAUUCUGUUACGUUAAUGAUAUUGUGCUUGCCAYCCUUGAAUUACUAAAGUAUCAUCAGAGAGUCUUAUAUAUUGAUAUAGAUAUUCAUCAUGGUGAUGGUGUUGAAGAAGCUUUUUAUACAACAGAUCGUGUAAUGACGGUAUCAUUCCAUAAAUAUGGGGAAUACUUUCCUGGCACAGGAGACUUGAGGGAUAUUGGUGCUGGAAAAGGCAAAUACUAUGCUGUCAAUUUUCCAAUGAGAGAUGGUAUAGAUGAUGAGUCAUAUGGGCAGAUAUUUAAGCCUAUUAUCUCAAAGGUGAUGGAGAUGUAUCAACCUAGUGCUGUGGUAUUACAGUGUGGUGCAGACUCAUUAUCUGGUGAUAGACUGGGUUGUUUCAAUCUAm6ACAGUCAAAGGUCAUGCUAAAUGUGUAGAAGUUGUAAAAACUUUUAm6ACUUACCAUUACUGAUGCUUGGAGGAGGUGGCUACACAAUCCGUAAUGUUGCUCGAUGUUGGACAUAUGAGACUGCAGUUGCCCUUGAUUGUGAGAUUCCCAAUGAGUUGCCAUAUAAUGAUUACUUUGAGUAUUUUGGACCAGACUUCAAm6ACUGCAUAUUAGUCCUUCAAACAUGACAAACCAGAACACUCCAGAAUAUAUGGAAAAGAUAAAACAGCGUUUGUUUGAAAAUUUGCGCAUGUUACCUCAUGCACCUGGUGUCCAGAUGCAAGCUAUUCCAGAAGAUGCUGUUCAUGAAGACAGUGGAGAUGAAGAUGGAGAAGAUCCAGACAAGAGAAUUUCUAUUCGAGCAUCAGACAAGCGGAUAGCUUGUGAUGAAGAAUUCUCAGAUUCUGAGGAUGAAGGAGAAGGAGGUCGAAGAAAUGUGGCUGAUCAUAAGAAAGGAGCAAAGAAAGCUAGAAUUGAAGAAGAUAAGAAAGAAACAGAGGACAAAAAAACAGACGUUAAGGAAGAAGAUAAAUCCAAGGACAACAGUGGUGAAAAAACAGAUACCAAAGGAACCAAAUCAGAACAGCUCAGCAACCCCUGAAUUUGACAGUCUCACCAAUUUCAGAAAAUCAUUAAAAAGAAAAUAUUGAAAGGAAAAUGUUUUCUUUUUGAAGACUUCUGGCUUCAUUUUAUACUACUUUGGCAUGGm6ACUGUAUUUAUUUUCAAAUGGCUUUUUCGUUUUUGUUUUUCUUGGCAAGUUUUAUUGUGAGUUUUUCUAAUUAUGAAGCAAAAUUUCUUUUCUCCACCAUGCUYUAUGUGAUAGUAUUUAAAAUUGAUGUGAGUUAUUAUGUCAAAAAAACUGAUCUAUUAAAGAAGUAAUUGGCCUUUCUGAGCUGAUUUUUCCAUCUUUUGUAAUUAUCUYUAUUAAAAAm6AUUGUACUUGG
Sequence (MODOMICS CODE ENCODING)	GUUCCCGGCCCGGCACAGUUAGAACGAGACCCUCUUCCUGGCGCAGCCCCCGCGGUUCCUGCGGGCGGGAAUCAGGGGGCCCGCCCGUCUUGUCUCCUGCCUCUCCCCCUUCGGCCGUGCAGUCCGCAGCCUCGAAGGUGGCCGCCGCUGGGGACGGCGCCGGCCUACCCCGCCUUGGUGGUGGCGGCGGCGAAGGGGGCGGCCCAUUCUCUCCCUUCUCCCGCCCACCAUUCGUGGCAACGCAGGUGAUAUUGGAAAUUAUUAUUAUGGACAGGGUCA2000000009UCCCAUGAAGCCUCAUAGAAUCCGCAUGACCCAUA2000000006ACUUGCUGUUAAAUUAUGGCUUAUAC2000000006AGAAAAAUGGAAAUAUAUAGGCCCCAUAAAGCCACUGCCGAAGAAAUGACAAAAUAUCACAGUGAUGAGUAUAUCAAAUUUCUACGGUCAAUAAGACCAGAUA2000000006ACAUGUCUGAGUAUAGUAAGCAGAUGCAGAGAUUUAAUGUUGGAGAAGAUUGUCCAGUGUUUGAUGGACUCUUUGAGUUUUGUCAGCUCUCAACUGGCGGUUCAGUUGCUGGAGCUGUGAAGUUAA2000000006ACCGACAACAGACUGAUAUGGCUGUUAAUUGGGCUGGAGGAUUACAUCAUGCUAAGAAAUCAGAAGCAUCAGGAUUCUGUUACGUUAAUGAUAUUGUGCUUGCCA2000000009UCCUUGAAUUACUAAAGUAUCAUCAGAGAGUCUUAUAUAUUGAUAUAGAUAUUCAUCAUGGUGAUGGUGUUGAAGAAGCUUUUUAUACAACAGAUCGUGUAAUGACGGUAUCAUUCCAUAAAUAUGGGGAAUACUUUCCUGGCACAGGAGACUUGAGGGAUAUUGGUGCUGGAAAAGGCAAAUACUAUGCUGUCAAUUUUCCAAUGAGAGAUGGUAUAGAUGAUGAGUCAUAUGGGCAGAUAUUUAAGCCUAUUAUCUCAAAGGUGAUGGAGAUGUAUCAACCUAGUGCUGUGGUAUUACAGUGUGGUGCAGACUCAUUAUCUGGUGAUAGACUGGGUUGUUUCAAUCUA2000000006ACAGUCAAAGGUCAUGCUAAAUGUGUAGAAGUUGUAAAAACUUUUA2000000006ACUUACCAUUACUGAUGCUUGGAGGAGGUGGCUACACAAUCCGUAAUGUUGCUCGAUGUUGGACAUAUGAGACUGCAGUUGCCCUUGAUUGUGAGAUUCCCAAUGAGUUGCCAUAUAAUGAUUACUUUGAGUAUUUUGGACCAGACUUCAA2000000006ACUGCAUAUUAGUCCUUCAAACAUGACAAACCAGAACACUCCAGAAUAUAUGGAAAAGAUAAAACAGCGUUUGUUUGAAAAUUUGCGCAUGUUACCUCAUGCACCUGGUGUCCAGAUGCAAGCUAUUCCAGAAGAUGCUGUUCAUGAAGACAGUGGAGAUGAAGAUGGAGAAGAUCCAGACAAGAGAAUUUCUAUUCGAGCAUCAGACAAGCGGAUAGCUUGUGAUGAAGAAUUCUCAGAUUCUGAGGAUGAAGGAGAAGGAGGUCGAAGAAAUGUGGCUGAUCAUAAGAAAGGAGCAAAGAAAGCUAGAAUUGAAGAAGAUAAGAAAGAAACAGAGGACAAAAAAACAGACGUUAAGGAAGAAGAUAAAUCCAAGGACAACAGUGGUGAAAAAACAGAUACCAAAGGAACCAAAUCAGAACAGCUCAGCAACCCCUGAAUUUGACAGUCUCACCAAUUUCAGAAAAUCAUUAAAAAGAAAAUAUUGAAAGGAAAAUGUUUUCUUUUUGAAGACUUCUGGCUUCAUUUUAUACUACUUUGGCAUGG2000000006ACUGUAUUUAUUUUCAAAUGGCUUUUUCGUUUUUGUUUUUCUUGGCAAGUUUUAUUGUGAGUUUUUCUAAUUAUGAAGCAAAAUUUCUUUUCUCCACCAUGCU2000000009UUAUGUGAUAGUAUUUAAAAUUGAUGUGAGUUAUUAUGUCAAAAAAACUGAUCUAUUAAAGAAGUAAUUGGCCUUUCUGAGCUGAUUUUUCCAUCUUUUGUAAUUAUCU2000000009UUAUUAAAAA2000000006AUUGUACUUGG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	280	315	341	444	570	675	1025	1071	1222	1768	1871	1980	1990
Modification Positions	Y	m6A	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	Y	Y	m6A
Genomic Coordinates	6:113959984:-	6:113959949:-	6:113959923:-	6:113958681:-	6:113956133:-	6:113956028:-	6:113948988:-	6:113946112:-	6:113945424:-	6:113940950:-	6:113940847:-	6:113940738:-	6:113940728:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL