General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000547950
Gene ID:	ENSG00000139218
Gene Name:	SCAF11
Sequence (UNICHARACTER ENCODING)	AAAAGAAAAAAAUGACAPCCAUCUAGAUGCUGAUGAUCCAAAUUCUGCUGACAAACAUAGAAAUGЖCUGUCCCAAUUGGAUAACAGAAAAAAUAAЖCUCUGGGCCUGAUCCAAGAACCAGAAAUCCAGAAAAGUUGAAAGAGUCUCAUUGGGAAGAAAAUAGAAAUGAAAAUUCAGGAAAUUCUUGGAAUAAAAЖCUUUGGUUCUGGUUGGGUAUCUAACCGUGGUAGAGGCAGAGGCAACCGUGGCAGAGGCACUUACAGAAGUAGUUUUGCCUAUAAAGAUCAGAAUGAAAAUCGGUGGCAAAAUCGAAAACCCCUCUCAGGGAAUUCAAЖCAGUUCAGGGAGUGAAUCUUUCAAGUUUGUGGAЖCAGCAAUCCUAUAAGCGAAAAAGUGAACAGGAGUUCUCAUUUGAUACACCAGCAGAUAGAUCUGGAUGGACAUCUGCAUCCAGCUGGGCCGUGAGAAAGЖCUUUGCCAGCAGAUGUACAAAACUACUACUCACGACGAGGCAGAAAUUCUUCAGGUCCACAGUCUGGAUGGAUGAAACAAGAGGAGGAAACAUCUGGACAGGAUUCUAGCCUAAAAGACCAAACAAACCAGCAAGUUGAUGGUUCUCAGCUACCUAUAAAUAUGAUGCAACCGCAAAUGAAUGUAAUGCAGCAACAAAUGAAUGCACAACACCAGCCUAUGAAUAUCUUC
Sequence (SHORT NAMES ENCODING)	AAAAGAAAAAAAUGACAYCCAUCUAGAUGCUGAUGAUCCAAAUUCUGCUGACAAACAUAGAAAUGm6ACUGUCCCAAUUGGAUAACAGAAAAAAUAAm6ACUCUGGGCCUGAUCCAAGAACCAGAAAUCCAGAAAAGUUGAAAGAGUCUCAUUGGGAAGAAAAUAGAAAUGAAAAUUCAGGAAAUUCUUGGAAUAAAAm6ACUUUGGUUCUGGUUGGGUAUCUAACCGUGGUAGAGGCAGAGGCAACCGUGGCAGAGGCACUUACAGAAGUAGUUUUGCCUAUAAAGAUCAGAAUGAAAAUCGGUGGCAAAAUCGAAAACCCCUCUCAGGGAAUUCAAm6ACAGUUCAGGGAGUGAAUCUUUCAAGUUUGUGGAm6ACAGCAAUCCUAUAAGCGAAAAAGUGAACAGGAGUUCUCAUUUGAUACACCAGCAGAUAGAUCUGGAUGGACAUCUGCAUCCAGCUGGGCCGUGAGAAAGm6ACUUUGCCAGCAGAUGUACAAAACUACUACUCACGACGAGGCAGAAAUUCUUCAGGUCCACAGUCUGGAUGGAUGAAACAAGAGGAGGAAACAUCUGGACAGGAUUCUAGCCUAAAAGACCAAACAAACCAGCAAGUUGAUGGUUCUCAGCUACCUAUAAAUAUGAUGCAACCGCAAAUGAAUGUAAUGCAGCAACAAAUGAAUGCACAACACCAGCCUAUGAAUAUCUUC
Sequence (MODOMICS CODE ENCODING)	AAAAGAAAAAAAUGACA2000000009UCCAUCUAGAUGCUGAUGAUCCAAAUUCUGCUGACAAACAUAGAAAUG2000000006ACUGUCCCAAUUGGAUAACAGAAAAAAUAA2000000006ACUCUGGGCCUGAUCCAAGAACCAGAAAUCCAGAAAAGUUGAAAGAGUCUCAUUGGGAAGAAAAUAGAAAUGAAAAUUCAGGAAAUUCUUGGAAUAAAA2000000006ACUUUGGUUCUGGUUGGGUAUCUAACCGUGGUAGAGGCAGAGGCAACCGUGGCAGAGGCACUUACAGAAGUAGUUUUGCCUAUAAAGAUCAGAAUGAAAAUCGGUGGCAAAAUCGAAAACCCCUCUCAGGGAAUUCAA2000000006ACAGUUCAGGGAGUGAAUCUUUCAAGUUUGUGGA2000000006ACAGCAAUCCUAUAAGCGAAAAAGUGAACAGGAGUUCUCAUUUGAUACACCAGCAGAUAGAUCUGGAUGGACAUCUGCAUCCAGCUGGGCCGUGAGAAAG2000000006ACUUUGCCAGCAGAUGUACAAAACUACUACUCACGACGAGGCAGAAAUUCUUCAGGUCCACAGUCUGGAUGGAUGAAACAAGAGGAGGAAACAUCUGGACAGGAUUCUAGCCUAAAAGACCAAACAAACCAGCAAGUUGAUGGUUCUCAGCUACCUAUAAAUAUGAUGCAACCGCAAAUGAAUGUAAUGCAGCAACAAAUGAAUGCACAACACCAGCCUAUGAAUAUCUUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	18	66	96	195	333	367	467
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	12:45926693:-	12:45926645:-	12:45926615:-	12:45926516:-	12:45926378:-	12:45926344:-	12:45926244:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP	3TeAZFYFxgvp 6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	3TeAZFYFxgvp 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3	4HMi5ykupT9V 5FhTyQVy2tKW 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 KTLz8piFYdwC KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G	BtsJQJ3DteUq dknfVe6BK8aP	6UuHp6YApVKv VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP