General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000398213
Gene ID:	ENSG00000170473
Gene Name:	PYM1
Sequence (UNICHARACTER ENCODING)	AAGAUGGCGACUCCCUAUGUUACUGACGAGЖCCGGCGGCAAGUAUAUCGCGUCAACACAGCGACCUGACGGGACCUGGCGCAAGCAGCGGAGGGUGAAAGAAGGAUAUGUGCCCCAGGAGGAGGUCCCAGUAUAUGAAAACAAGUAUGUGAAGUUUUUCAAGAGUAAACCAGAGUUGCCCCCAGGGCUAAGCCCUGAGGCCACUGCUCCUGUCACCCCAPCCAGGCCUGAAGGUGGUGAACCAGGCCUCUCCAAGACAGCCAAACGUAACCUGAAGCGAAAGGAGAAGAGGCGGCAGCAGCAAGAGAAAGGAGAGGCAGAGGCCUUGAGCAGGЖCUCUUGAUAAGGUGUCCCUGGAAGAGACAGCCCAACUCCCCAGUGCUCCACAGGGCUCUCGGGCAGCCCCCACAGCUGCAUCUGACCAGCCUGACUCAGCUGCCACCACUGAGAAAGCCAAGAAGAUAAAGAACCUAAAGAAGAAACUCCGGCAGGUGGAAGAGCUGCAGCAGCGGAUCCAGGCUGGGGAAGUCAGCCAGCCUAGCAAAGAGCAGCUAGAAAAGCUAGCAAGGAGGAGGGCGCUAGAAGAGGAGUUA#AGGЖCUUGGAGUUAGGCCUCUGAGGCCUUUGGGGAAUAGGGAAUGGЖCUGCAGAACAAЖCCGUGGGGCUCUCUGGGGUCUGGGGGAAUACGGGCAACAGCAGUCAGGAGGGGUACCCCCCAUACUGGCUUACUUCCACCPCCUGCGGCCCAGCUCUGUCCPCCAGAGCCUA#CGUCUCCCUCAAUCCUUCCCUUUUCUUCCCAACUUCUACUUUUUGGЖCUUUCCCCCUCCCAUUCCCAGUGUUCAAAAUCUCAGUGACUACCCCAGGUACCUUUGCUGCUGAUUUGGGUGUCUUGUUUAAAAGAAAAUCAGGUGGGUGGGAAUCUCUUGGAGAЖCUGAGGCUGAGGGUAGAGGGAGUAUGCCCAAGUCUUGGAGUCUUGGUUCCUGUUCGCGGUGUUUAUGGGUUAUUUCCCUCUCCAPCCCUCAUUUUUUUUUUUUUUUUAAAAAAAGCAAAAAUGAGAAUAAACACAAGUAGACAUGU
Sequence (SHORT NAMES ENCODING)	AAGAUGGCGACUCCCUAUGUUACUGACGAGm6ACCGGCGGCAAGUAUAUCGCGUCAACACAGCGACCUGACGGGACCUGGCGCAAGCAGCGGAGGGUGAAAGAAGGAUAUGUGCCCCAGGAGGAGGUCCCAGUAUAUGAAAACAAGUAUGUGAAGUUUUUCAAGAGUAAACCAGAGUUGCCCCCAGGGCUAAGCCCUGAGGCCACUGCUCCUGUCACCCCAYCCAGGCCUGAAGGUGGUGAACCAGGCCUCUCCAAGACAGCCAAACGUAACCUGAAGCGAAAGGAGAAGAGGCGGCAGCAGCAAGAGAAAGGAGAGGCAGAGGCCUUGAGCAGGm6ACUCUUGAUAAGGUGUCCCUGGAAGAGACAGCCCAACUCCCCAGUGCUCCACAGGGCUCUCGGGCAGCCCCCACAGCUGCAUCUGACCAGCCUGACUCAGCUGCCACCACUGAGAAAGCCAAGAAGAUAAAGAACCUAAAGAAGAAACUCCGGCAGGUGGAAGAGCUGCAGCAGCGGAUCCAGGCUGGGGAAGUCAGCCAGCCUAGCAAAGAGCAGCUAGAAAAGCUAGCAAGGAGGAGGGCGCUAGAAGAGGAGUUAGmAGGm6ACUUGGAGUUAGGCCUCUGAGGCCUUUGGGGAAUAGGGAAUGGm6ACUGCAGAACAAm6ACCGUGGGGCUCUCUGGGGUCUGGGGGAAUACGGGCAACAGCAGUCAGGAGGGGUACCCCCCAUACUGGCUUACUUCCACCYCCUGCGGCCCAGCUCUGUCCYCCAGAGCCUAGmCGUCUCCCUCAAUCCUUCCCUUUUCUUCCCAACUUCUACUUUUUGGm6ACUUUCCCCCUCCCAUUCCCAGUGUUCAAAAUCUCAGUGACUACCCCAGGUACCUUUGCUGCUGAUUUGGGUGUCUUGUUUAAAAGAAAAUCAGGUGGGUGGGAAUCUCUUGGAGAm6ACUGAGGCUGAGGGUAGAGGGAGUAUGCCCAAGUCUUGGAGUCUUGGUUCCUGUUCGCGGUGUUUAUGGGUUAUUUCCCUCUCCAYCCCUCAUUUUUUUUUUUUUUUUAAAAAAAGCAAAAAUGAGAAUAAACACAAGUAGACAUGU
Sequence (MODOMICS CODE ENCODING)	AAGAUGGCGACUCCCUAUGUUACUGACGAG2000000006ACCGGCGGCAAGUAUAUCGCGUCAACACAGCGACCUGACGGGACCUGGCGCAAGCAGCGGAGGGUGAAAGAAGGAUAUGUGCCCCAGGAGGAGGUCCCAGUAUAUGAAAACAAGUAUGUGAAGUUUUUCAAGAGUAAACCAGAGUUGCCCCCAGGGCUAAGCCCUGAGGCCACUGCUCCUGUCACCCCA2000000009UCCAGGCCUGAAGGUGGUGAACCAGGCCUCUCCAAGACAGCCAAACGUAACCUGAAGCGAAAGGAGAAGAGGCGGCAGCAGCAAGAGAAAGGAGAGGCAGAGGCCUUGAGCAGG2000000006ACUCUUGAUAAGGUGUCCCUGGAAGAGACAGCCCAACUCCCCAGUGCUCCACAGGGCUCUCGGGCAGCCCCCACAGCUGCAUCUGACCAGCCUGACUCAGCUGCCACCACUGAGAAAGCCAAGAAGAUAAAGAACCUAAAGAAGAAACUCCGGCAGGUGGAAGAGCUGCAGCAGCGGAUCCAGGCUGGGGAAGUCAGCCAGCCUAGCAAAGAGCAGCUAGAAAAGCUAGCAAGGAGGAGGGCGCUAGAAGAGGAGUUA2000000090GAGG2000000006ACUUGGAGUUAGGCCUCUGAGGCCUUUGGGGAAUAGGGAAUGG2000000006ACUGCAGAACAA2000000006ACCGUGGGGCUCUCUGGGGUCUGGGGGAAUACGGGCAACAGCAGUCAGGAGGGGUACCCCCCAUACUGGCUUACUUCCACC2000000009UCCUGCGGCCCAGCUCUGUCC2000000009UCCAGAGCCUA2000000090GCGUCUCCCUCAAUCCUUCCCUUUUCUUCCCAACUUCUACUUUUUGG2000000006ACUUUCCCCCUCCCAUUCCCAGUGUUCAAAAUCUCAGUGACUACCCCAGGUACCUUUGCUGCUGAUUUGGGUGUCUUGUUUAAAAGAAAAUCAGGUGGGUGGGAAUCUCUUGGAGA2000000006ACUGAGGCUGAGGGUAGAGGGAGUAUGCCCAAGUCUUGGAGUCUUGGUUCCUGUUCGCGGUGUUUAUGGGUUAUUUCCCUCUCCA2000000009UCCCUCAUUUUUUUUUUUUUUUUAAAAAAAGCAAAAAUGAGAAUAAACACAAGUAGACAUGU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	31	220	334	592	596	639	651	732	753	764	811	927	1012
Modification Positions	m6A	Y	m6A	Gm	m6A	m6A	m6A	Y	Y	Gm	m6A	m6A	Y
Genomic Coordinates	12:55927082:-	12:55902267:-	12:55902153:-	12:55901895:-	12:55901891:-	12:55901848:-	12:55901836:-	12:55901755:-	12:55901734:-	12:55901723:-	12:55901676:-	12:55901560:-	12:55901475:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 nfCHyrYzE6fB 834aFpha8RvT JASnTTw2HeNE ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 93arJtwJmuS9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 BkoLW2CBToyL KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8