General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000394013
Gene ID:	ENSG00000181852
Gene Name:	RNF41
Sequence (UNICHARACTER ENCODING)	ACGAGUGGUAGGAGUCUUCUUUCCCCUCCUUCCCCUUUCCCUUCCCUUCCCGGGAGAGGCUGGGACCCGGCACCAGGGCAGUACUGUGGCCGCUGCGGCCUCAGCUCCGACUGGGUCAGGUUGCGGAGACUCCAGGCCGCUUCCAGGGCGAGUACUCCUGAUUGUGACAUCACAUUCAUCCCCUGGGCGAUGGAGCUUGUCACUGGGAAGGAAUACUCAGUCGGAGAAUAGCCAACAAGAUGGGUUACUGGGAGAAUCUCUUCAGUGGCACUGAGUGGAGGCAUCAGGGGGUUGGAGCCUUGUGAЖCAGGGAACCUGCCCCCCAACACUUGGAAGGACCUGGGUUUCAGUGAUGAGACAUGGGGUAUGAUGUAACCCGUUUCCAGGGGGAUGUUGACGAAGAUCUUAUCUGCCCUAUUUGCAGUGGAGUCUUGGAGGAGCCAGUACAGACCAGCUUUUGAUACAGCCAUGCACUCUGCAUUUUGAUGUGAAAGCUGCCACCUUCAAUAGGUCAUUUCUCUGCCAGCCUUGCCAGACCAGAGUCAGUUGUAUCAUCCUGGGGCAAGUAUGAGGAGAAGCUCACGAUUACCAGGCACCUCAUUGUGAACAUGCUUUCUGCAACGCCUGCAUCACCCAGUGGUUCUCUCAGCAACAGЖCAUGUCCAGUGGACCGUAGUGUUGUGACGGUCGCCCAUCUGCGCCCAGUACCUCGGAUCAUGCGGAACAUGUUGUCAAAGCUGCAGAUUGCCUGUGACAACGCUGUGUUCGGCUGUAGUGCCGUUGUCCGGCUUGACAACCUCAUGUCUCACCUCAGCGACUGUGAGCACAACCCGAAGCGGCCUGUGACCUGUGAACAGGGCUGUGGCCUGGAGAUGCCCAAAGAUGAGCUGCCCAACCAUAACUGCAUUAAGCACCUGCGCUCAGUGGUACAGCAGCAGCAGACACGCAUCGCAGAGCUGGAGAAGACGUCAGCUGAACACAAACACCAGCUGGCGGAGCAGAAGCGAGACAPCCAGCUGCUAAAGGCAUACAUGCGUGCAAUCCGCAGUGUCAACCCCAACCUUCAGAACCUGGAGGAGACAAUUGAAUACAACGAGAUCCUAGAGUGGGUGAACUCCCUUCAGCCAGCAAGAGUGACCCGCUGGGGAGGGAUGAUCUCGACUCCUGAUGCUGUGCUCCAGGCUGUAAUCAAGCGCUCCCUGGUGGAGAGUGGCUGUCCUGCUUCUAUUGUCAACGAGCUGAUUGAAAAUGCCCACGAGCGUAGCUGGCCCCAGGGUCUGGCCACACUAGAGЖCUAGACAGAUGAACCGACGCUACUAUGAGAACUACGUGGCCAAGCGCAUCCCUGGCAAGCAGGCUGUUGUCGUGAUGGCCUGUGAGAACCAGCACAUGGGGGAUGACAUGGUGCAAGAGCCAGGCCUUGUCAUGAUAUUUGCGCAUGGCGUGGAAGAGAUAUAAGAGAЖCUCGACUGGCUAUCAGGAAGAGAUGGAAAUCAGAAAAUCCCAUCACUCCAGCAGCUGGGЖCCUGAGUCCUACCCACCAUUCUUAAUACUGUGGCUUAUACCUGAGCCACACAUCUCCCUGCCCUUCUGGCACUGAAGGGCCUUGGGGUAGUUUGCUCAGCCUUUCAGGUGGGAAACCCAGAUUUCCUCCCUUUGCCAUAUUCCCCUAAAAUGUCUAUAAAUUAUCAGUCUGGGUGGGAAAGCCCCCACCUCCAPCCAUUUUCCUGCUUAGGGUCCCUGGUUCCAGUUAUUUUCAGAAAGCACAAAGAGAUUCAAUUUCCCUGGAGGAUCAGGACAGAGGAAGGAAUCUCUAAUCGUCCCUCUCCUCCAAAACCAGGGAAUCAGAGCAGUCAGGCCUGUUGACUCUAAGCAGCAGACAPCCUGAAGAAAUGGUAAGGGUGGAGCCAAAUCUCUAGAAAUAAGUAGUGAGGCCGUUAAUUGGCCAUCACUGAUGGCCCUUAGGGAAAGЖCUGGACCUCUGUGCCAAGCAGUAUCCCUGUUCAGCCCACCUUAAAGGUGUAGGCACCCACUGGGUCUACCAGUAUGCAGGUUGGGAUACUGAAAAUUUCCAGAUGAGCUCUUCUUUCCUACAAGUUUUCAUAAUUAGGGAAUGCCAGGGUUUAGGGUAGGGGUUAAUCUGUUGGGGGUUGAUGUGUUUAGCAAGAAGCUACUCCUAGCUUUUGCUAAAAUAUGGUUGGCACUGCCUCUUGUGGCACAGGCCAPAAUUGUUCCAUAGЖCCCCUCUCUAGCCCUGUGACUGUAGUUAGUUACUUUGAUAAUUUUCUUUGGCCAUUGUUUGUUUAUAUUUCACAAACUCCACCUACUGCCCCCCCCCCUCUUUUUUUUAAGAAUGGCCUGAUCAUGGCUAUCUCAGCCACAUUGUUGGCAAUUUAAUUUAUUUACUUCCUUUUUUUUUUUUUAAGAAAGGAAAAAAGAAAAAAAAAUCAAACUUGAAA
Sequence (SHORT NAMES ENCODING)	ACGAGUGGUAGGAGUCUUCUUUCCCCUCCUUCCCCUUUCCCUUCCCUUCCCGGGAGAGGCUGGGACCCGGCACCAGGGCAGUACUGUGGCCGCUGCGGCCUCAGCUCCGACUGGGUCAGGUUGCGGAGACUCCAGGCCGCUUCCAGGGCGAGUACUCCUGAUUGUGACAUCACAUUCAUCCCCUGGGCGAUGGAGCUUGUCACUGGGAAGGAAUACUCAGUCGGAGAAUAGCCAACAAGAUGGGUUACUGGGAGAAUCUCUUCAGUGGCACUGAGUGGAGGCAUCAGGGGGUUGGAGCCUUGUGAm6ACAGGGAACCUGCCCCCCAACACUUGGAAGGACCUGGGUUUCAGUGAUGAGACAUGGGGUAUGAUGUAACCCGUUUCCAGGGGGAUGUUGACGAAGAUCUUAUCUGCCCUAUUUGCAGUGGAGUCUUGGAGGAGCCAGUACAGACCAGCUUUUGAUACAGCCAUGCACUCUGCAUUUUGAUGUGAAAGCUGCCACCUUCAAUAGGUCAUUUCUCUGCCAGCCUUGCCAGACCAGAGUCAGUUGUAUCAUCCUGGGGCAAGUAUGAGGAGAAGCUCACGAUUACCAGGCACCUCAUUGUGAACAUGCUUUCUGCAACGCCUGCAUCACCCAGUGGUUCUCUCAGCAACAGm6ACAUGUCCAGUGGACCGUAGUGUUGUGACGGUCGCCCAUCUGCGCCCAGUACCUCGGAUCAUGCGGAACAUGUUGUCAAAGCUGCAGAUUGCCUGUGACAACGCUGUGUUCGGCUGUAGUGCCGUUGUCCGGCUUGACAACCUCAUGUCUCACCUCAGCGACUGUGAGCACAACCCGAAGCGGCCUGUGACCUGUGAACAGGGCUGUGGCCUGGAGAUGCCCAAAGAUGAGCUGCCCAACCAUAACUGCAUUAAGCACCUGCGCUCAGUGGUACAGCAGCAGCAGACACGCAUCGCAGAGCUGGAGAAGACGUCAGCUGAACACAAACACCAGCUGGCGGAGCAGAAGCGAGACAYCCAGCUGCUAAAGGCAUACAUGCGUGCAAUCCGCAGUGUCAACCCCAACCUUCAGAACCUGGAGGAGACAAUUGAAUACAACGAGAUCCUAGAGUGGGUGAACUCCCUUCAGCCAGCAAGAGUGACCCGCUGGGGAGGGAUGAUCUCGACUCCUGAUGCUGUGCUCCAGGCUGUAAUCAAGCGCUCCCUGGUGGAGAGUGGCUGUCCUGCUUCUAUUGUCAACGAGCUGAUUGAAAAUGCCCACGAGCGUAGCUGGCCCCAGGGUCUGGCCACACUAGAGm6ACUAGACAGAUGAACCGACGCUACUAUGAGAACUACGUGGCCAAGCGCAUCCCUGGCAAGCAGGCUGUUGUCGUGAUGGCCUGUGAGAACCAGCACAUGGGGGAUGACAUGGUGCAAGAGCCAGGCCUUGUCAUGAUAUUUGCGCAUGGCGUGGAAGAGAUAUAAGAGAm6ACUCGACUGGCUAUCAGGAAGAGAUGGAAAUCAGAAAAUCCCAUCACUCCAGCAGCUGGGm6ACCUGAGUCCUACCCACCAUUCUUAAUACUGUGGCUUAUACCUGAGCCACACAUCUCCCUGCCCUUCUGGCACUGAAGGGCCUUGGGGUAGUUUGCUCAGCCUUUCAGGUGGGAAACCCAGAUUUCCUCCCUUUGCCAUAUUCCCCUAAAAUGUCUAUAAAUUAUCAGUCUGGGUGGGAAAGCCCCCACCUCCAYCCAUUUUCCUGCUUAGGGUCCCUGGUUCCAGUUAUUUUCAGAAAGCACAAAGAGAUUCAAUUUCCCUGGAGGAUCAGGACAGAGGAAGGAAUCUCUAAUCGUCCCUCUCCUCCAAAACCAGGGAAUCAGAGCAGUCAGGCCUGUUGACUCUAAGCAGCAGACAYCCUGAAGAAAUGGUAAGGGUGGAGCCAAAUCUCUAGAAAUAAGUAGUGAGGCCGUUAAUUGGCCAUCACUGAUGGCCCUUAGGGAAAGm6ACUGGACCUCUGUGCCAAGCAGUAUCCCUGUUCAGCCCACCUUAAAGGUGUAGGCACCCACUGGGUCUACCAGUAUGCAGGUUGGGAUACUGAAAAUUUCCAGAUGAGCUCUUCUUUCCUACAAGUUUUCAUAAUUAGGGAAUGCCAGGGUUUAGGGUAGGGGUUAAUCUGUUGGGGGUUGAUGUGUUUAGCAAGAAGCUACUCCUAGCUUUUGCUAAAAUAUGGUUGGCACUGCCUCUUGUGGCACAGGCCAYAAUUGUUCCAUAGm6ACCCCUCUCUAGCCCUGUGACUGUAGUUAGUUACUUUGAUAAUUUUCUUUGGCCAUUGUUUGUUUAUAUUUCACAAACUCCACCUACUGCCCCCCCCCCUCUUUUUUUUAAGAAUGGCCUGAUCAUGGCUAUCUCAGCCACAUUGUUGGCAAUUUAAUUUAUUUACUUCCUUUUUUUUUUUUUAAGAAAGGAAAAAAGAAAAAAAAAUCAAACUUGAAA
Sequence (MODOMICS CODE ENCODING)	ACGAGUGGUAGGAGUCUUCUUUCCCCUCCUUCCCCUUUCCCUUCCCUUCCCGGGAGAGGCUGGGACCCGGCACCAGGGCAGUACUGUGGCCGCUGCGGCCUCAGCUCCGACUGGGUCAGGUUGCGGAGACUCCAGGCCGCUUCCAGGGCGAGUACUCCUGAUUGUGACAUCACAUUCAUCCCCUGGGCGAUGGAGCUUGUCACUGGGAAGGAAUACUCAGUCGGAGAAUAGCCAACAAGAUGGGUUACUGGGAGAAUCUCUUCAGUGGCACUGAGUGGAGGCAUCAGGGGGUUGGAGCCUUGUGA2000000006ACAGGGAACCUGCCCCCCAACACUUGGAAGGACCUGGGUUUCAGUGAUGAGACAUGGGGUAUGAUGUAACCCGUUUCCAGGGGGAUGUUGACGAAGAUCUUAUCUGCCCUAUUUGCAGUGGAGUCUUGGAGGAGCCAGUACAGACCAGCUUUUGAUACAGCCAUGCACUCUGCAUUUUGAUGUGAAAGCUGCCACCUUCAAUAGGUCAUUUCUCUGCCAGCCUUGCCAGACCAGAGUCAGUUGUAUCAUCCUGGGGCAAGUAUGAGGAGAAGCUCACGAUUACCAGGCACCUCAUUGUGAACAUGCUUUCUGCAACGCCUGCAUCACCCAGUGGUUCUCUCAGCAACAG2000000006ACAUGUCCAGUGGACCGUAGUGUUGUGACGGUCGCCCAUCUGCGCCCAGUACCUCGGAUCAUGCGGAACAUGUUGUCAAAGCUGCAGAUUGCCUGUGACAACGCUGUGUUCGGCUGUAGUGCCGUUGUCCGGCUUGACAACCUCAUGUCUCACCUCAGCGACUGUGAGCACAACCCGAAGCGGCCUGUGACCUGUGAACAGGGCUGUGGCCUGGAGAUGCCCAAAGAUGAGCUGCCCAACCAUAACUGCAUUAAGCACCUGCGCUCAGUGGUACAGCAGCAGCAGACACGCAUCGCAGAGCUGGAGAAGACGUCAGCUGAACACAAACACCAGCUGGCGGAGCAGAAGCGAGACA2000000009UCCAGCUGCUAAAGGCAUACAUGCGUGCAAUCCGCAGUGUCAACCCCAACCUUCAGAACCUGGAGGAGACAAUUGAAUACAACGAGAUCCUAGAGUGGGUGAACUCCCUUCAGCCAGCAAGAGUGACCCGCUGGGGAGGGAUGAUCUCGACUCCUGAUGCUGUGCUCCAGGCUGUAAUCAAGCGCUCCCUGGUGGAGAGUGGCUGUCCUGCUUCUAUUGUCAACGAGCUGAUUGAAAAUGCCCACGAGCGUAGCUGGCCCCAGGGUCUGGCCACACUAGAG2000000006ACUAGACAGAUGAACCGACGCUACUAUGAGAACUACGUGGCCAAGCGCAUCCCUGGCAAGCAGGCUGUUGUCGUGAUGGCCUGUGAGAACCAGCACAUGGGGGAUGACAUGGUGCAAGAGCCAGGCCUUGUCAUGAUAUUUGCGCAUGGCGUGGAAGAGAUAUAAGAGA2000000006ACUCGACUGGCUAUCAGGAAGAGAUGGAAAUCAGAAAAUCCCAUCACUCCAGCAGCUGGG2000000006ACCUGAGUCCUACCCACCAUUCUUAAUACUGUGGCUUAUACCUGAGCCACACAUCUCCCUGCCCUUCUGGCACUGAAGGGCCUUGGGGUAGUUUGCUCAGCCUUUCAGGUGGGAAACCCAGAUUUCCUCCCUUUGCCAUAUUCCCCUAAAAUGUCUAUAAAUUAUCAGUCUGGGUGGGAAAGCCCCCACCUCCA2000000009UCCAUUUUCCUGCUUAGGGUCCCUGGUUCCAGUUAUUUUCAGAAAGCACAAAGAGAUUCAAUUUCCCUGGAGGAUCAGGACAGAGGAAGGAAUCUCUAAUCGUCCCUCUCCUCCAAAACCAGGGAAUCAGAGCAGUCAGGCCUGUUGACUCUAAGCAGCAGACA2000000009UCCUGAAGAAAUGGUAAGGGUGGAGCCAAAUCUCUAGAAAUAAGUAGUGAGGCCGUUAAUUGGCCAUCACUGAUGGCCCUUAGGGAAAG2000000006ACUGGACCUCUGUGCCAAGCAGUAUCCCUGUUCAGCCCACCUUAAAGGUGUAGGCACCCACUGGGUCUACCAGUAUGCAGGUUGGGAUACUGAAAAUUUCCAGAUGAGCUCUUCUUUCCUACAAGUUUUCAUAAUUAGGGAAUGCCAGGGUUUAGGGUAGGGGUUAAUCUGUUGGGGGUUGAUGUGUUUAGCAAGAAGCUACUCCUAGCUUUUGCUAAAAUAUGGUUGGCACUGCCUCUUGUGGCACAGGCCA2000000009UAAUUGUUCCAUAG2000000006ACCCCUCUCUAGCCCUGUGACUGUAGUUAGUUACUUUGAUAAUUUUCUUUGGCCAUUGUUUGUUUAUAUUUCACAAACUCCACCUACUGCCCCCCCCCCUCUUUUUUUUAAGAAUGGCCUGAUCAUGGCUAUCUCAGCCACAUUGUUGGCAAUUUAAUUUAUUUACUUCCUUUUUUUUUUUUUAAGAAAGGAAAAAAGAAAAAAAAAUCAAACUUGAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	306	655	1010	1291	1460	1520	1714	1878	1967	2220	2234
Modification Positions	m6A	m6A	Y	m6A	m6A	m6A	Y	Y	m6A	Y	m6A
Genomic Coordinates	12:56216458:-	12:56210505:-	12:56207739:-	12:56206611:-	12:56206442:-	12:56206382:-	12:56206188:-	12:56206024:-	12:56205935:-	12:56205682:-	12:56205668:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	ArijeGVTwYBw KTLz8piFYdwC BtsJQJ3DteUq Yfn77uLS5tv8	ArijeGVTwYBw KTLz8piFYdwC BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BkoLW2CBToyL Lny8GcCeVGc9 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq Yfn77uLS5tv8	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 BsCW7emuRX7M Lny8GcCeVGc9 XUkp6ghERQML BtsJQJ3DteUq iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se nfCHyrYzE6fB BsCW7emuRX7M Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	ArijeGVTwYBw BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8