General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000548573
Gene ID:	ENSG00000066117
Gene Name:	SMARCD1
Sequence (UNICHARACTER ENCODING)	AGUUAUGUGCAAUGGUUUGCUUAACUUGCCUCAUUUCCCUUGGGCAAAUGAGAUGGCCUUGUCCAAAUAUGAUGCCACUAAЖCAAAAGAGGAAGUUCUCUUCCUUUUUUAAGUCCUUGGUGAUUGAACUGGACAAAGACCUGUAUGGGCCAGACAACCAUCUGGUAGAAPGGCACAGGACCGCCACUACCCAGGAGЖCCGAUGGCUUUCAGGUGAAGCGGCCGGGAGACGUGAAUGUACGGUGUACUGUCCUACUGAUGCUGGAUUACCAGCCUCCCCAGUUUAAAUUAGACCCCCGCCUAGCUCGACUCCUGGGCAUCCAUACCCAGACUCGUCCAGUGAUCAPCCAAGCACUGUGGCAAUAUAUUAAGACACAPAAGCUCCAGGACCCUCACGAGCGGGAGUUUGUCAUCUGUGACAAGUACCUGCAGCAGAUCUUUGAGUCUCAACGUAUGAAGUUUUCAGAGAUCCCUCAGCGGCUCCAUGCCUUGCUUAUGCCACCAGAACCUAUCAUCAUUAAUCAUGUCAUCAGUGUUGACCCGAAUGAUCAGAAAAAGACAGCUUGUUAUGACAUUGAUGUUGAAGUGGAUGACACCUUGAAGЖCCCAGAUGAAUUCUUUUCUGCUGUCCACUGCCAGCCAACAGGAGAUUGCUACUCUAGACAACAAGAUCCAUGAGACAAUAGAAACCAUCAACCAGCUGAAGACUCAGCGGGAGUUCAUGCUGAGCUUUGCCAGAGACCCUCAGGGUUUCAUCAAUGACUGGCUUCAGUCCCAGUGCAGGGACCUCAAGACAAUGACUGAUGUGGUGGGUAACCCAGAGGAGGAGCGCCGAGCUGAGUUCUACUUCCAGCCCUGGGCUCAGGAGGCUGUGUGCCGAUACUUCUACUCCAAGGUGCAGCAGAGACGACAAGAAUUAGAGCAAGCCCUGGGAAUCCGGAAUACAUAGGGCCUCUCCCACAGCCCUGAUUCGACUGCACCAAUUCUUGAUUUGGGCCCUGUGCUGCCUGCCUCAUAGUAUCUGCCUUGGUCUUGCUUGGGGCGUUCCAGGGGAUGCUGUUGGUUCAAGGACAACACCAGAAUGAAGAGGGUCUCACAAGACACCUGUUAUCCUCUUCUUUCACCCUAUCUCUUCCCACCCCCAGCUUCCCUUUGCCCCACAAAGUUCCCAUGUGCCUGUACCCUCCCCUGGUCUACAUAGGACCUCUAGAUAGUGUUAGAGAGAGAACAUGUAGUGGUAAUGAGUGCUUGGAAUGGAUUGGGCCUCAGGCCAGGUGGUCUUCAAGGGGACCAGCUAACUGAUCCUGCCCUUCAGAGACCCAGGAGUUGGGAGCUUUCGCUCCUUCUCCAAGACUCAGGCCUGUGGGCACUCUAUAAGCUAGUUGAUCUUGGCUCUCCUGAUAACAGAAUCCAAUUUCCUUCCUUCCCUCCACAGGUUUGGAACAAACUCUCCCUUCACUUGUUGCCCUGUAGCACUACAGAAACCCUGGUUCUUGGGCUCCACUGAGCCCCAGGUCAGUCCCCAGCCCUCUGGGUUGGCCUGCUGUCAGUGCUUCUCUCACUCCUUAGUUGGGGUCCACAUCAGUAUUGGAGUUUUGUUCUPUAUUGCUCCCPCCCAGACACUCCCUGUGGCUGCCCUUUGUGAUUCCCUCAGAUCUGCCCUAAUCCCGGGCAUUUGGGUGGGGGAAUCUUGCCUUUCCCUUUCAGAGCCCCAGGGAUCUCAUCUGGGGAACUGUCAUUGCCAGCAGAGGCUGUUCCUUCCUGCUGUUUGGAGAUGUGACUCAUUCAUUCACUCACUCCACCCUGCCUCUGCAPCCCUUAAUGGAGAAACGGGCCUAAAACCAAACGGGUAAAAAGCCCUGGGCCAUCCCUGUCUUCCUGUCCCUUGUCUGCCCAGUUGACACCUACUGGUGACUUCUAGGGCACUGAGGAGUGAAAGCGCCUAGGGCUGGAGAAUAGCGCUGAGUUGGGUUUGUGACUCUUCCCUCUCCCUGCCUCACAGGAUUGUGACUCCCCAGCCCCUGCCCUCAAAGCUUCAGЖCCCCUCAGGUAGCAGCAGGACCUUGUGAUCUUGGCCCCUUGGAUCUGAGAUGGUUUUU
Sequence (SHORT NAMES ENCODING)	AGUUAUGUGCAAUGGUUUGCUUAACUUGCCUCAUUUCCCUUGGGCAAAUGAGAUGGCCUUGUCCAAAUAUGAUGCCACUAAm6ACAAAAGAGGAAGUUCUCUUCCUUUUUUAAGUCCUUGGUGAUUGAACUGGACAAAGACCUGUAUGGGCCAGACAACCAUCUGGUAGAAYGGCACAGGACCGCCACUACCCAGGAGm6ACCGAUGGCUUUCAGGUGAAGCGGCCGGGAGACGUGAAUGUACGGUGUACUGUCCUACUGAUGCUGGAUUACCAGCCUCCCCAGUUUAAAUUAGACCCCCGCCUAGCUCGACUCCUGGGCAUCCAUACCCAGACUCGUCCAGUGAUCAYCCAAGCACUGUGGCAAUAUAUUAAGACACAYAAGCUCCAGGACCCUCACGAGCGGGAGUUUGUCAUCUGUGACAAGUACCUGCAGCAGAUCUUUGAGUCUCAACGUAUGAAGUUUUCAGAGAUCCCUCAGCGGCUCCAUGCCUUGCUUAUGCCACCAGAACCUAUCAUCAUUAAUCAUGUCAUCAGUGUUGACCCGAAUGAUCAGAAAAAGACAGCUUGUUAUGACAUUGAUGUUGAAGUGGAUGACACCUUGAAGm6ACCCAGAUGAAUUCUUUUCUGCUGUCCACUGCCAGCCAACAGGAGAUUGCUACUCUAGACAACAAGAUCCAUGAGACAAUAGAAACCAUCAACCAGCUGAAGACUCAGCGGGAGUUCAUGCUGAGCUUUGCCAGAGACCCUCAGGGUUUCAUCAAUGACUGGCUUCAGUCCCAGUGCAGGGACCUCAAGACAAUGACUGAUGUGGUGGGUAACCCAGAGGAGGAGCGCCGAGCUGAGUUCUACUUCCAGCCCUGGGCUCAGGAGGCUGUGUGCCGAUACUUCUACUCCAAGGUGCAGCAGAGACGACAAGAAUUAGAGCAAGCCCUGGGAAUCCGGAAUACAUAGGGCCUCUCCCACAGCCCUGAUUCGACUGCACCAAUUCUUGAUUUGGGCCCUGUGCUGCCUGCCUCAUAGUAUCUGCCUUGGUCUUGCUUGGGGCGUUCCAGGGGAUGCUGUUGGUUCAAGGACAACACCAGAAUGAAGAGGGUCUCACAAGACACCUGUUAUCCUCUUCUUUCACCCUAUCUCUUCCCACCCCCAGCUUCCCUUUGCCCCACAAAGUUCCCAUGUGCCUGUACCCUCCCCUGGUCUACAUAGGACCUCUAGAUAGUGUUAGAGAGAGAACAUGUAGUGGUAAUGAGUGCUUGGAAUGGAUUGGGCCUCAGGCCAGGUGGUCUUCAAGGGGACCAGCUAACUGAUCCUGCCCUUCAGAGACCCAGGAGUUGGGAGCUUUCGCUCCUUCUCCAAGACUCAGGCCUGUGGGCACUCUAUAAGCUAGUUGAUCUUGGCUCUCCUGAUAACAGAAUCCAAUUUCCUUCCUUCCCUCCACAGGUUUGGAACAAACUCUCCCUUCACUUGUUGCCCUGUAGCACUACAGAAACCCUGGUUCUUGGGCUCCACUGAGCCCCAGGUCAGUCCCCAGCCCUCUGGGUUGGCCUGCUGUCAGUGCUUCUCUCACUCCUUAGUUGGGGUCCACAUCAGUAUUGGAGUUUUGUUCUYUAUUGCUCCCYCCCAGACACUCCCUGUGGCUGCCCUUUGUGAUUCCCUCAGAUCUGCCCUAAUCCCGGGCAUUUGGGUGGGGGAAUCUUGCCUUUCCCUUUCAGAGCCCCAGGGAUCUCAUCUGGGGAACUGUCAUUGCCAGCAGAGGCUGUUCCUUCCUGCUGUUUGGAGAUGUGACUCAUUCAUUCACUCACUCCACCCUGCCUCUGCAYCCCUUAAUGGAGAAACGGGCCUAAAACCAAACGGGUAAAAAGCCCUGGGCCAUCCCUGUCUUCCUGUCCCUUGUCUGCCCAGUUGACACCUACUGGUGACUUCUAGGGCACUGAGGAGUGAAAGCGCCUAGGGCUGGAGAAUAGCGCUGAGUUGGGUUUGUGACUCUUCCCUCUCCCUGCCUCACAGGAUUGUGACUCCCCAGCCCCUGCCCUCAAAGCUUCAGm6ACCCCUCAGGUAGCAGCAGGACCUUGUGAUCUUGGCCCCUUGGAUCUGAGAUGGUUUUU
Sequence (MODOMICS CODE ENCODING)	AGUUAUGUGCAAUGGUUUGCUUAACUUGCCUCAUUUCCCUUGGGCAAAUGAGAUGGCCUUGUCCAAAUAUGAUGCCACUAA2000000006ACAAAAGAGGAAGUUCUCUUCCUUUUUUAAGUCCUUGGUGAUUGAACUGGACAAAGACCUGUAUGGGCCAGACAACCAUCUGGUAGAA2000000009UGGCACAGGACCGCCACUACCCAGGAG2000000006ACCGAUGGCUUUCAGGUGAAGCGGCCGGGAGACGUGAAUGUACGGUGUACUGUCCUACUGAUGCUGGAUUACCAGCCUCCCCAGUUUAAAUUAGACCCCCGCCUAGCUCGACUCCUGGGCAUCCAUACCCAGACUCGUCCAGUGAUCA2000000009UCCAAGCACUGUGGCAAUAUAUUAAGACACA2000000009UAAGCUCCAGGACCCUCACGAGCGGGAGUUUGUCAUCUGUGACAAGUACCUGCAGCAGAUCUUUGAGUCUCAACGUAUGAAGUUUUCAGAGAUCCCUCAGCGGCUCCAUGCCUUGCUUAUGCCACCAGAACCUAUCAUCAUUAAUCAUGUCAUCAGUGUUGACCCGAAUGAUCAGAAAAAGACAGCUUGUUAUGACAUUGAUGUUGAAGUGGAUGACACCUUGAAG2000000006ACCCAGAUGAAUUCUUUUCUGCUGUCCACUGCCAGCCAACAGGAGAUUGCUACUCUAGACAACAAGAUCCAUGAGACAAUAGAAACCAUCAACCAGCUGAAGACUCAGCGGGAGUUCAUGCUGAGCUUUGCCAGAGACCCUCAGGGUUUCAUCAAUGACUGGCUUCAGUCCCAGUGCAGGGACCUCAAGACAAUGACUGAUGUGGUGGGUAACCCAGAGGAGGAGCGCCGAGCUGAGUUCUACUUCCAGCCCUGGGCUCAGGAGGCUGUGUGCCGAUACUUCUACUCCAAGGUGCAGCAGAGACGACAAGAAUUAGAGCAAGCCCUGGGAAUCCGGAAUACAUAGGGCCUCUCCCACAGCCCUGAUUCGACUGCACCAAUUCUUGAUUUGGGCCCUGUGCUGCCUGCCUCAUAGUAUCUGCCUUGGUCUUGCUUGGGGCGUUCCAGGGGAUGCUGUUGGUUCAAGGACAACACCAGAAUGAAGAGGGUCUCACAAGACACCUGUUAUCCUCUUCUUUCACCCUAUCUCUUCCCACCCCCAGCUUCCCUUUGCCCCACAAAGUUCCCAUGUGCCUGUACCCUCCCCUGGUCUACAUAGGACCUCUAGAUAGUGUUAGAGAGAGAACAUGUAGUGGUAAUGAGUGCUUGGAAUGGAUUGGGCCUCAGGCCAGGUGGUCUUCAAGGGGACCAGCUAACUGAUCCUGCCCUUCAGAGACCCAGGAGUUGGGAGCUUUCGCUCCUUCUCCAAGACUCAGGCCUGUGGGCACUCUAUAAGCUAGUUGAUCUUGGCUCUCCUGAUAACAGAAUCCAAUUUCCUUCCUUCCCUCCACAGGUUUGGAACAAACUCUCCCUUCACUUGUUGCCCUGUAGCACUACAGAAACCCUGGUUCUUGGGCUCCACUGAGCCCCAGGUCAGUCCCCAGCCCUCUGGGUUGGCCUGCUGUCAGUGCUUCUCUCACUCCUUAGUUGGGGUCCACAUCAGUAUUGGAGUUUUGUUCU2000000009UUAUUGCUCCC2000000009UCCCAGACACUCCCUGUGGCUGCCCUUUGUGAUUCCCUCAGAUCUGCCCUAAUCCCGGGCAUUUGGGUGGGGGAAUCUUGCCUUUCCCUUUCAGAGCCCCAGGGAUCUCAUCUGGGGAACUGUCAUUGCCAGCAGAGGCUGUUCCUUCCUGCUGUUUGGAGAUGUGACUCAUUCAUUCACUCACUCCACCCUGCCUCUGCA2000000009UCCCUUAAUGGAGAAACGGGCCUAAAACCAAACGGGUAAAAAGCCCUGGGCCAUCCCUGUCUUCCUGUCCCUUGUCUGCCCAGUUGACACCUACUGGUGACUUCUAGGGCACUGAGGAGUGAAAGCGCCUAGGGCUGGAGAAUAGCGCUGAGUUGGGUUUGUGACUCUUCCCUCUCCCUGCCUCACAGGAUUGUGACUCCCCAGCCCCUGCCCUCAAAGCUUCAG2000000006ACCCCUCAGGUAGCAGCAGGACCUUGUGAUCUUGGCCCCUUGGAUCUGAGAUGGUUUUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	82	170	197	345	376	602	1600	1611	1812	2037
Modification Positions	m6A	Y	m6A	Y	Y	m6A	Y	Y	Y	m6A
Genomic Coordinates	12:50088550:+	12:50089884:+	12:50089911:+	12:50090314:+	12:50090345:+	12:50094507:+	12:50099654:+	12:50099665:+	12:50099866:+	12:50100091:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	ArijeGVTwYBw BkoLW2CBToyL WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8