General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000316824
Gene ID:	ENSG00000180318
Gene Name:	ALX1
Sequence (UNICHARACTER ENCODING)	AGUUUCUGUGCCCCAGGAGCUACGCGACAGUCUUCCAGGAUUAUGGAGUUUCUGAGCGAGAAGUUUGCCCUCAAGAGCCCUCCGAGUAAAAACAGUGЖCUUUUACAUGGGCGCAGGAGGUCCUCUGGAGCACGUUAUGGAGACGCUGGACAAUGAGUCCUUUUACAGCAAAGCGUCUGCAGGCAAAUGCGUGCAGGCCUUCGGACCCCUGCCCCGCGCCGAGCAUCACGUGCGCUUGGAGAGGACCUCGCCCUGUCAGGACAGCAGCGUGAACUAUGGGAUCACUAAAGUAGAAGGACAGCCCCUUCACACCGAACUGAAUAGAGCUAUGGACAACUGUAACAGUCUCCGAAUGUCUCCCGUGAAAGGGAUGCAAGAGAAGGGAGAGCUGGAUGAЖCUUGGGGAUAAAUGUGAUAGCAAUGUAUCCAGCAGUAAGAAACGGAGGCACCGAACCACCUUCACCAGUUUGCAGCUAGAGGAGCUGGAGAAAGUCUUUCAGAAAACUCAUUACCCGGAUGUGUAUGUCAGAGAЖCAGCUUGCUCUGAGGACAGAGCUCACUGAGGCCAGGGUCCAGGUUUGGUUUCAAAAUCGAAGGGCCAAAUGGAGAAAAAGGGAACGUUAUGGCCAAAUACAACAAGCGAAAAGCCAUUUUGCUGCCACCUAUGAUAUAUCAGUUUUGCCAAGGACUGACAGCUACCCACAGAUUCAGAACAAUUUGUGGGCAGGAAAUGCAAGUGGUGGUUCUGUGGUUACUUCAUGCAUGUUACCACGUGACACUUCCPCCUGUAUGACACCUUAUUCUCACUCGCCUCGGACAGAUUCCAGUUACACGGGGUUUUCAAACCACCAGAACCAGUUCAGCCACGUGCCCCUCAACAAUUUUUUCACUGЖCUCUCUUCUUACUGGGGCAACCAAUGGЖCAUGCAUUUGAAACAAAGCCAGAGUUUGAAAGGAGGUCUUCCAGUAUCGCAGUUCUUCGAAUGAAAGCCAAGGAGCACACCGCCAAUAUUUCAUGGGCCAUGUAACAUACAGUACUCUUUUAUUUUUCUUUUAAUAGCAAAGUUAAЖCAUUCUUAUUUCUCAUAUUUAAAGGAUACCACAAUAAGCUGCUGUGUGUGGAAUUGCUAAAGGUCAAGAUAUUCAGUGAGACCAGCUUAAAUGAAUAGUUGUUAUUUAACAUUAAAAUCUAAGAAUGAACCUCUGAAAAGACUAAAUAGGUUUACCAUGUGCCAGUCUCCACAAACCCUGUUUUAGUAGUAAGGUUUUCUUUUUCUAUUGUACAAGUCAAUGAAAUAUGAUCACGCAACUUAUUAAAGAAUAAAUGUGUUAAACAAA
Sequence (SHORT NAMES ENCODING)	AGUUUCUGUGCCCCAGGAGCUACGCGACAGUCUUCCAGGAUUAUGGAGUUUCUGAGCGAGAAGUUUGCCCUCAAGAGCCCUCCGAGUAAAAACAGUGm6ACUUUUACAUGGGCGCAGGAGGUCCUCUGGAGCACGUUAUGGAGACGCUGGACAAUGAGUCCUUUUACAGCAAAGCGUCUGCAGGCAAAUGCGUGCAGGCCUUCGGACCCCUGCCCCGCGCCGAGCAUCACGUGCGCUUGGAGAGGACCUCGCCCUGUCAGGACAGCAGCGUGAACUAUGGGAUCACUAAAGUAGAAGGACAGCCCCUUCACACCGAACUGAAUAGAGCUAUGGACAACUGUAACAGUCUCCGAAUGUCUCCCGUGAAAGGGAUGCAAGAGAAGGGAGAGCUGGAUGAm6ACUUGGGGAUAAAUGUGAUAGCAAUGUAUCCAGCAGUAAGAAACGGAGGCACCGAACCACCUUCACCAGUUUGCAGCUAGAGGAGCUGGAGAAAGUCUUUCAGAAAACUCAUUACCCGGAUGUGUAUGUCAGAGAm6ACAGCUUGCUCUGAGGACAGAGCUCACUGAGGCCAGGGUCCAGGUUUGGUUUCAAAAUCGAAGGGCCAAAUGGAGAAAAAGGGAACGUUAUGGCCAAAUACAACAAGCGAAAAGCCAUUUUGCUGCCACCUAUGAUAUAUCAGUUUUGCCAAGGACUGACAGCUACCCACAGAUUCAGAACAAUUUGUGGGCAGGAAAUGCAAGUGGUGGUUCUGUGGUUACUUCAUGCAUGUUACCACGUGACACUUCCYCCUGUAUGACACCUUAUUCUCACUCGCCUCGGACAGAUUCCAGUUACACGGGGUUUUCAAACCACCAGAACCAGUUCAGCCACGUGCCCCUCAACAAUUUUUUCACUGm6ACUCUCUUCUUACUGGGGCAACCAAUGGm6ACAUGCAUUUGAAACAAAGCCAGAGUUUGAAAGGAGGUCUUCCAGUAUCGCAGUUCUUCGAAUGAAAGCCAAGGAGCACACCGCCAAUAUUUCAUGGGCCAUGUAACAUACAGUACUCUUUUAUUUUUCUUUUAAUAGCAAAGUUAAm6ACAUUCUUAUUUCUCAUAUUUAAAGGAUACCACAAUAAGCUGCUGUGUGUGGAAUUGCUAAAGGUCAAGAUAUUCAGUGAGACCAGCUUAAAUGAAUAGUUGUUAUUUAACAUUAAAAUCUAAGAAUGAACCUCUGAAAAGACUAAAUAGGUUUACCAUGUGCCAGUCUCCACAAACCCUGUUUUAGUAGUAAGGUUUUCUUUUUCUAUUGUACAAGUCAAUGAAAUAUGAUCACGCAACUUAUUAAAGAAUAAAUGUGUUAAACAAA
Sequence (MODOMICS CODE ENCODING)	AGUUUCUGUGCCCCAGGAGCUACGCGACAGUCUUCCAGGAUUAUGGAGUUUCUGAGCGAGAAGUUUGCCCUCAAGAGCCCUCCGAGUAAAAACAGUG2000000006ACUUUUACAUGGGCGCAGGAGGUCCUCUGGAGCACGUUAUGGAGACGCUGGACAAUGAGUCCUUUUACAGCAAAGCGUCUGCAGGCAAAUGCGUGCAGGCCUUCGGACCCCUGCCCCGCGCCGAGCAUCACGUGCGCUUGGAGAGGACCUCGCCCUGUCAGGACAGCAGCGUGAACUAUGGGAUCACUAAAGUAGAAGGACAGCCCCUUCACACCGAACUGAAUAGAGCUAUGGACAACUGUAACAGUCUCCGAAUGUCUCCCGUGAAAGGGAUGCAAGAGAAGGGAGAGCUGGAUGA2000000006ACUUGGGGAUAAAUGUGAUAGCAAUGUAUCCAGCAGUAAGAAACGGAGGCACCGAACCACCUUCACCAGUUUGCAGCUAGAGGAGCUGGAGAAAGUCUUUCAGAAAACUCAUUACCCGGAUGUGUAUGUCAGAGA2000000006ACAGCUUGCUCUGAGGACAGAGCUCACUGAGGCCAGGGUCCAGGUUUGGUUUCAAAAUCGAAGGGCCAAAUGGAGAAAAAGGGAACGUUAUGGCCAAAUACAACAAGCGAAAAGCCAUUUUGCUGCCACCUAUGAUAUAUCAGUUUUGCCAAGGACUGACAGCUACCCACAGAUUCAGAACAAUUUGUGGGCAGGAAAUGCAAGUGGUGGUUCUGUGGUUACUUCAUGCAUGUUACCACGUGACACUUCC2000000009UCCUGUAUGACACCUUAUUCUCACUCGCCUCGGACAGAUUCCAGUUACACGGGGUUUUCAAACCACCAGAACCAGUUCAGCCACGUGCCCCUCAACAAUUUUUUCACUG2000000006ACUCUCUUCUUACUGGGGCAACCAAUGG2000000006ACAUGCAUUUGAAACAAAGCCAGAGUUUGAAAGGAGGUCUUCCAGUAUCGCAGUUCUUCGAAUGAAAGCCAAGGAGCACACCGCCAAUAUUUCAUGGGCCAUGUAACAUACAGUACUCUUUUAUUUUUCUUUUAAUAGCAAAGUUAA2000000006ACAUUCUUAUUUCUCAUAUUUAAAGGAUACCACAAUAAGCUGCUGUGUGUGGAAUUGCUAAAGGUCAAGAUAUUCAGUGAGACCAGCUUAAAUGAAUAGUUGUUAUUUAACAUUAAAAUCUAAGAAUGAACCUCUGAAAAGACUAAAUAGGUUUACCAUGUGCCAGUCUCCACAAACCCUGUUUUAGUAGUAAGGUUUUCUUUUUCUAUUGUACAAGUCAAUGAAAUAUGAUCACGCAACUUAUUAAAGAAUAAAUGUGUUAAACAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	98	396	531	781	890	918	1065
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	m6A
Genomic Coordinates	12:85280317:+	12:85283699:+	12:85283834:+	12:85301233:+	12:85301342:+	12:85301370:+	12:85301517:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek msuJfBpJvM5H UN3tNpbCPHYf VyCX26p5UBRL Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8