General Data

RNA Type	pseudogene
Original Source	Sci-ModoM
Transcript ID:	ENST00000539977
Gene ID:	ENSG00000255642
Gene Name:	PABPC1P4
Sequence (UNICHARACTER ENCODING)	AUGAACCCCAGUGCCCCCAGCUACGUCCUCGCUGUACGUGGGGGACCUCCAUCCCGACGUGACCGAGGCGAUGCUCUACAAGAAGUUCAGCGCGGCCGGGCUCAUCCU?UCCAUCCGGGUCUGCAGGGACAUGAUCACCCACGGCUCCUUGGGCUACGCGUAUGUGAACUUCCAGUAGCCCGCGGACGCGGAGCAUGCUGUGAACACUAUGAAUUUUGAUGUUAUAAAGGGCAAGCCAGUACGCAUCGUGUAGUCUCAGCGUGAUCCAUCACUUCGCAAAAGUGGAGUGGGCUACAUAUUCAUUAAAAAUCUGGACAAAUCCAUUGAUAAUAAAGCACUGUAUGAUACAUUUUUCUGCUUUUGGUAACAUCCUUUCAUGUAAGGUGGGCUGUGAUGAAAAUGAUUCCAAGGGCUAUGGAUCUGUACACUUUGAGACACAGGAAGCAGCUGAAAGAGCUAUGGAAAAAAUGAAUGGAAUGCUCCUAAAUGAUCGCAAAGUAUUUGUUGGACGAUUUAUGUCUCAUAAAGAACGAGAAGCUGAACUUGGAGCUACGUGAAAGAGUUCACCAAUGUUUACAUCAAGAAUUUCGGAGAAGACAUGGAUGAUGAGCGCCUUAAGAAUCUCUUUGGCAAGUUUGGGCCUGCCUUAAAUGUGAAAGUAAUGACUGGUGAAAGUGGAAAAUCUAAAGGAUUUGGAUUUGUAAGCUUUGAAAGGCUUGAAGAUGCACAGAAAGCUGUGGAUGAAAUGAAAGGAGCUCAAUGGAAAACAAAUUUAUGUAGGUAGAGCUCAGAAAAAAGUGGAACGGCAGACAGAACUUAAGCGCAAAUUUGAACAGGUGAGGCAAGAUAGGAUCACCAGAUACCACCGUGUUAAUCUUUAUGUGAAAAAUCUUGAUGAUGGCAUUAAUAAUUAACGUCUCCGGAAAGAGUUUUCUCCAUUUGGUACAAUCACCAGUGCAAAGGUUAUGAUGGAGGGUGGUCGCUGCAAAGGGUUUGGUUUUGUAUGUUUCUCCUCACCAGAAGAAGCCACUAAAGCAGUUACAGAAAUGAAUGGUAGAAUUGUGGCCACAAAGCCAUUGUAUGUUGCUUUAGCUCAGCGCAAAGAAGAGUGCCAGGCUCACCUCACUAACCAGUAUAUGCAAAGAAUGGCAAGUGUACGAGCUGUGCCCAAUCUUGAAAUCAACCCCUACCAGCCAGCACCUCCUUCAGGUUACUUCAUGGCAGCUAUCCCACAGACUCAGAACGGUGCUGCAUACUAUCCUCCUAGCCAAAUUGCUCAACUAAGACCAAGUCCUCGCUGGACUGCUGAGGGUGCCAGACCCCAUCCAUUCCAAAAUAGGCCCAGUGCUAUCCGCCCGGCUGCUCCUAGACCACCAUUUAGUACUAUGAGACCAGCUUCUUCACAGGUUCCAUGAGUUAUGUCAACACAGCGUGUUGCUAACACAUCGACACAGACAAUGGGUCCACGUCCUGCAGCUGCUGCUGCUGCCACUCCACAUUAUAACUAUGCUGCGGGAGUUCGCAGUCCUCAGAAACAUCUUAAUGCACAGCCACAAGUUACAAUGCAACAGCCUGCUGCUCAUGUACAAGGUCAGGAACCUUUGACUGCUUCCAUGUUGGUAUCUGCCCAUGCUCAAGAGCAAAAGCAAAUGUUGGGUGAACGGCUGUUUCCUCUUAUUCAAGCCAUGCACCUUACUCUUGCUGGUAAAAUCACUGGCAUGUUGUUGGAGAUUGGUAAUUCAGAACUUCUUCAUAUGCUGGAGUCUCCAGAGUCACUCCGUUCUAAGGUUAAUGAAACUGUAGCUGUACUACAAGCCCACCAAGCUGAAGUGGCUGCCCAGAAAGCAGUUAACCGUGCCACCGGUGUUCCAACUG
Sequence (SHORT NAMES ENCODING)	AUGAACCCCAGUGCCCCCAGCUACGUCCUCGCUGUACGUGGGGGACCUCCAUCCCGACGUGACCGAGGCGAUGCUCUACAAGAAGUUCAGCGCGGCCGGGCUCAUCCUm5CUCCAUCCGGGUCUGCAGGGACAUGAUCACCCACGGCUCCUUGGGCUACGCGUAUGUGAACUUCCAGUAGCCCGCGGACGCGGAGCAUGCUGUGAACACUAUGAAUUUUGAUGUUAUAAAGGGCAAGCCAGUACGCAUCGUGUAGUCUCAGCGUGAUCCAUCACUUCGCAAAAGUGGAGUGGGCUACAUAUUCAUUAAAAAUCUGGACAAAUCCAUUGAUAAUAAAGCACUGUAUGAUACAUUUUUCUGCUUUUGGUAACAUCCUUUCAUGUAAGGUGGGCUGUGAUGAAAAUGAUUCCAAGGGCUAUGGAUCUGUACACUUUGAGACACAGGAAGCAGCUGAAAGAGCUAUGGAAAAAAUGAAUGGAAUGCUCCUAAAUGAUCGCAAAGUAUUUGUUGGACGAUUUAUGUCUCAUAAAGAACGAGAAGCUGAACUUGGAGCUACGUGAAAGAGUUCACCAAUGUUUACAUCAAGAAUUUCGGAGAAGACAUGGAUGAUGAGCGCCUUAAGAAUCUCUUUGGCAAGUUUGGGCCUGCCUUAAAUGUGAAAGUAAUGACUGGUGAAAGUGGAAAAUCUAAAGGAUUUGGAUUUGUAAGCUUUGAAAGGCUUGAAGAUGCACAGAAAGCUGUGGAUGAAAUGAAAGGAGCUCAAUGGAAAACAAAUUUAUGUAGGUAGAGCUCAGAAAAAAGUGGAACGGCAGACAGAACUUAAGCGCAAAUUUGAACAGGUGAGGCAAGAUAGGAUCACCAGAUACCACCGUGUUAAUCUUUAUGUGAAAAAUCUUGAUGAUGGCAUUAAUAAUUAACGUCUCCGGAAAGAGUUUUCUCCAUUUGGUACAAUCACCAGUGCAAAGGUUAUGAUGGAGGGUGGUCGCUGCAAAGGGUUUGGUUUUGUAUGUUUCUCCUCACCAGAAGAAGCCACUAAAGCAGUUACAGAAAUGAAUGGUAGAAUUGUGGCCACAAAGCCAUUGUAUGUUGCUUUAGCUCAGCGCAAAGAAGAGUGCCAGGCUCACCUCACUAACCAGUAUAUGCAAAGAAUGGCAAGUGUACGAGCUGUGCCCAAUCUUGAAAUCAACCCCUACCAGCCAGCACCUCCUUCAGGUUACUUCAUGGCAGCUAUCCCACAGACUCAGAACGGUGCUGCAUACUAUCCUCCUAGCCAAAUUGCUCAACUAAGACCAAGUCCUCGCUGGACUGCUGAGGGUGCCAGACCCCAUCCAUUCCAAAAUAGGCCCAGUGCUAUCCGCCCGGCUGCUCCUAGACCACCAUUUAGUACUAUGAGACCAGCUUCUUCACAGGUUCCAUGAGUUAUGUCAACACAGCGUGUUGCUAACACAUCGACACAGACAAUGGGUCCACGUCCUGCAGCUGCUGCUGCUGCCACUCCACAUUAUAACUAUGCUGCGGGAGUUCGCAGUCCUCAGAAACAUCUUAAUGCACAGCCACAAGUUACAAUGCAACAGCCUGCUGCUCAUGUACAAGGUCAGGAACCUUUGACUGCUUCCAUGUUGGUAUCUGCCCAUGCUCAAGAGCAAAAGCAAAUGUUGGGUGAACGGCUGUUUCCUCUUAUUCAAGCCAUGCACCUUACUCUUGCUGGUAAAAUCACUGGCAUGUUGUUGGAGAUUGGUAAUUCAGAACUUCUUCAUAUGCUGGAGUCUCCAGAGUCACUCCGUUCUAAGGUUAAUGAAACUGUAGCUGUACUACAAGCCCACCAAGCUGAAGUGGCUGCCCAGAAAGCAGUUAACCGUGCCACCGGUGUUCCAACUG
Sequence (MODOMICS CODE ENCODING)	AUGAACCCCAGUGCCCCCAGCUACGUCCUCGCUGUACGUGGGGGACCUCCAUCCCGACGUGACCGAGGCGAUGCUCUACAAGAAGUUCAGCGCGGCCGGGCUCAUCCU2000000005CUCCAUCCGGGUCUGCAGGGACAUGAUCACCCACGGCUCCUUGGGCUACGCGUAUGUGAACUUCCAGUAGCCCGCGGACGCGGAGCAUGCUGUGAACACUAUGAAUUUUGAUGUUAUAAAGGGCAAGCCAGUACGCAUCGUGUAGUCUCAGCGUGAUCCAUCACUUCGCAAAAGUGGAGUGGGCUACAUAUUCAUUAAAAAUCUGGACAAAUCCAUUGAUAAUAAAGCACUGUAUGAUACAUUUUUCUGCUUUUGGUAACAUCCUUUCAUGUAAGGUGGGCUGUGAUGAAAAUGAUUCCAAGGGCUAUGGAUCUGUACACUUUGAGACACAGGAAGCAGCUGAAAGAGCUAUGGAAAAAAUGAAUGGAAUGCUCCUAAAUGAUCGCAAAGUAUUUGUUGGACGAUUUAUGUCUCAUAAAGAACGAGAAGCUGAACUUGGAGCUACGUGAAAGAGUUCACCAAUGUUUACAUCAAGAAUUUCGGAGAAGACAUGGAUGAUGAGCGCCUUAAGAAUCUCUUUGGCAAGUUUGGGCCUGCCUUAAAUGUGAAAGUAAUGACUGGUGAAAGUGGAAAAUCUAAAGGAUUUGGAUUUGUAAGCUUUGAAAGGCUUGAAGAUGCACAGAAAGCUGUGGAUGAAAUGAAAGGAGCUCAAUGGAAAACAAAUUUAUGUAGGUAGAGCUCAGAAAAAAGUGGAACGGCAGACAGAACUUAAGCGCAAAUUUGAACAGGUGAGGCAAGAUAGGAUCACCAGAUACCACCGUGUUAAUCUUUAUGUGAAAAAUCUUGAUGAUGGCAUUAAUAAUUAACGUCUCCGGAAAGAGUUUUCUCCAUUUGGUACAAUCACCAGUGCAAAGGUUAUGAUGGAGGGUGGUCGCUGCAAAGGGUUUGGUUUUGUAUGUUUCUCCUCACCAGAAGAAGCCACUAAAGCAGUUACAGAAAUGAAUGGUAGAAUUGUGGCCACAAAGCCAUUGUAUGUUGCUUUAGCUCAGCGCAAAGAAGAGUGCCAGGCUCACCUCACUAACCAGUAUAUGCAAAGAAUGGCAAGUGUACGAGCUGUGCCCAAUCUUGAAAUCAACCCCUACCAGCCAGCACCUCCUUCAGGUUACUUCAUGGCAGCUAUCCCACAGACUCAGAACGGUGCUGCAUACUAUCCUCCUAGCCAAAUUGCUCAACUAAGACCAAGUCCUCGCUGGACUGCUGAGGGUGCCAGACCCCAUCCAUUCCAAAAUAGGCCCAGUGCUAUCCGCCCGGCUGCUCCUAGACCACCAUUUAGUACUAUGAGACCAGCUUCUUCACAGGUUCCAUGAGUUAUGUCAACACAGCGUGUUGCUAACACAUCGACACAGACAAUGGGUCCACGUCCUGCAGCUGCUGCUGCUGCCACUCCACAUUAUAACUAUGCUGCGGGAGUUCGCAGUCCUCAGAAACAUCUUAAUGCACAGCCACAAGUUACAAUGCAACAGCCUGCUGCUCAUGUACAAGGUCAGGAACCUUUGACUGCUUCCAUGUUGGUAUCUGCCCAUGCUCAAGAGCAAAAGCAAAUGUUGGGUGAACGGCUGUUUCCUCUUAUUCAAGCCAUGCACCUUACUCUUGCUGGUAAAAUCACUGGCAUGUUGUUGGAGAUUGGUAAUUCAGAACUUCUUCAUAUGCUGGAGUCUCCAGAGUCACUCCGUUCUAAGGUUAAUGAAACUGUAGCUGUACUACAAGCCCACCAAGCUGAAGUGGCUGCCCAGAAAGCAGUUAACCGUGCCACCGGUGUUCCAACUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	109
Modification Positions	m5C
Genomic Coordinates	12:63822129:+
Level of Experimental Evidence	3
Level of Experimental Reliability	3
Source	Sci-ModoM
EUFIDs	bfJ5wdhcAaBm DSMzjY4xbXU4 eLavpH6X9gVW kANKQCQxcUF3