General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000538617
Gene ID:	ENSG00000150991
Gene Name:	UBC
Sequence (UNICHARACTER ENCODING)	AUUGUCCUUGUCCCGCGGCCCCGGGAGCCCCCCGCGACCGGCCUGGGAGGCUCAGGGAGGUUGAAGGGGGCUGAGCAAAGGAAGCCCCGUCAUUACCUCAAAUGUGACCCAAAAAUAAAGACCCGUCCAUCUCGCAGGAGAGCGGAACAGGCGAGGAAAAGUAGUCCCUUCUCGGCGAUUCUGCGGAGGGAUCUCCGUGGGGCGGUGAACGCCGAUGAUUAUAUAAGGACGCGCCGGGUGUGGCACЖGCUЖGUUCCGUCGCAGCCGGGAUPUGGGUCGCAGUUCUUGUUUGUGGAUCGCUGUGAUCGUCACUUGACAAUGCAGAUCUUCGUGAAGACUCUGACUGGUAAGACCAUCACCCUCGAGGUUGAGCCCAGUGACACCAUCGAGAAUGUCAAGGCAAAGAUCCAAGAUAAGGAAGGCAUCCCUCCUGACCAGCAGAGGCUGAUCUUUGCUGGAAAACAGCUGGAAGAUGGGCGCACCCUGUCUGACUACЖACAUCCAGAAAGAGUCCACCCUGCACCUGGUGCUCCGUCUCAGAGGUGGGAUGCAAAUCUUCGUGAAGACACUCACUGGCAAGACCAUCACCCUUGAGGUCGAGCCCAGUGACACCAUCGAGAACGUCAAAGCAAAGAUCCAGGACAAGGAAGGCAUUCCUCCUGACCAGCAGAGGUUGAUCUUUGCCGGAAAGCAGCUGGAAGAUGGGCGCACCCUGUCUGACUACAACAUCCAGAAAGAGUCUACCCUGCACCUGGUGCUCCGUCUCAGAGGUGGGAUGCAGAUCUUCGUGAAGACCCUGACUGGUAAGACCAUCACUCUCGAAGUGGAGCCGAGUGACACCAUUGAGAAUGUCAAGGCAAAGAUCCAAGACAAGGAAGGCAUCCCUCCUGACCAGCAGAGGUUGAUCUUUGCUGGGAAACAGCUGGAAGAUGGЖCGCACCCUGUCUGACUACAACAUCCAGAAAGAGUCCACCCUGCACCUGGUGCUCCGUCUCAGAGGUGGGAUGCAAAUCUUCGUGAAGACCCUGЖCUGGUAAGЖCCAUCACCCUCGAGGUGGAGCCCAGUGACACCAUCGAGAAUGUCAAGGCAAAGAUCCAAGAUAAGGAAGGCAUCCCUCCUGAUCAGCAGAGGUUGAUCUUUGCUGGGAAACAGCUGGAAGAUGGЖCGCACCCUGUCUGACUACAACAUCCAGAAAGAGUCCACUCUGCACUUGGUCCUGCGCUUGAGGGGGGGUGUCUAAGUUUCCCCUUUUAAGGUUUCAACAAAUUUCAUUGCACUUUCCUUUCAAUAAAGUUGUUGCAUUCCCAA
Sequence (SHORT NAMES ENCODING)	AUUGUCCUUGUCCCGCGGCCCCGGGAGCCCCCCGCGACCGGCCUGGGAGGCUCAGGGAGGUUGAAGGGGGCUGAGCAAAGGAAGCCCCGUCAUUACCUCAAAUGUGACCCAAAAAUAAAGACCCGUCCAUCUCGCAGGAGAGCGGAACAGGCGAGGAAAAGUAGUCCCUUCUCGGCGAUUCUGCGGAGGGAUCUCCGUGGGGCGGUGAACGCCGAUGAUUAUAUAAGGACGCGCCGGGUGUGGCACm6AGCUm6AGUUCCGUCGCAGCCGGGAUYUGGGUCGCAGUUCUUGUUUGUGGAUCGCUGUGAUCGUCACUUGACAAUGCAGAUCUUCGUGAAGACUCUGACUGGUAAGACCAUCACCCUCGAGGUUGAGCCCAGUGACACCAUCGAGAAUGUCAAGGCAAAGAUCCAAGAUAAGGAAGGCAUCCCUCCUGACCAGCAGAGGCUGAUCUUUGCUGGAAAACAGCUGGAAGAUGGGCGCACCCUGUCUGACUACm6AACAUCCAGAAAGAGUCCACCCUGCACCUGGUGCUCCGUCUCAGAGGUGGGAUGCAAAUCUUCGUGAAGACACUCACUGGCAAGACCAUCACCCUUGAGGUCGAGCCCAGUGACACCAUCGAGAACGUCAAAGCAAAGAUCCAGGACAAGGAAGGCAUUCCUCCUGACCAGCAGAGGUUGAUCUUUGCCGGAAAGCAGCUGGAAGAUGGGCGCACCCUGUCUGACUACAACAUCCAGAAAGAGUCUACCCUGCACCUGGUGCUCCGUCUCAGAGGUGGGAUGCAGAUCUUCGUGAAGACCCUGACUGGUAAGACCAUCACUCUCGAAGUGGAGCCGAGUGACACCAUUGAGAAUGUCAAGGCAAAGAUCCAAGACAAGGAAGGCAUCCCUCCUGACCAGCAGAGGUUGAUCUUUGCUGGGAAACAGCUGGAAGAUGGm6ACGCACCCUGUCUGACUACAACAUCCAGAAAGAGUCCACCCUGCACCUGGUGCUCCGUCUCAGAGGUGGGAUGCAAAUCUUCGUGAAGACCCUGm6ACUGGUAAGm6ACCAUCACCCUCGAGGUGGAGCCCAGUGACACCAUCGAGAAUGUCAAGGCAAAGAUCCAAGAUAAGGAAGGCAUCCCUCCUGAUCAGCAGAGGUUGAUCUUUGCUGGGAAACAGCUGGAAGAUGGm6ACGCACCCUGUCUGACUACAACAUCCAGAAAGAGUCCACUCUGCACUUGGUCCUGCGCUUGAGGGGGGGUGUCUAAGUUUCCCCUUUUAAGGUUUCAACAAAUUUCAUUGCACUUUCCUUUCAAUAAAGUUGUUGCAUUCCCAA
Sequence (MODOMICS CODE ENCODING)	AUUGUCCUUGUCCCGCGGCCCCGGGAGCCCCCCGCGACCGGCCUGGGAGGCUCAGGGAGGUUGAAGGGGGCUGAGCAAAGGAAGCCCCGUCAUUACCUCAAAUGUGACCCAAAAAUAAAGACCCGUCCAUCUCGCAGGAGAGCGGAACAGGCGAGGAAAAGUAGUCCCUUCUCGGCGAUUCUGCGGAGGGAUCUCCGUGGGGCGGUGAACGCCGAUGAUUAUAUAAGGACGCGCCGGGUGUGGCAC2000000006AGCU2000000006AGUUCCGUCGCAGCCGGGAU2000000009UUGGGUCGCAGUUCUUGUUUGUGGAUCGCUGUGAUCGUCACUUGACAAUGCAGAUCUUCGUGAAGACUCUGACUGGUAAGACCAUCACCCUCGAGGUUGAGCCCAGUGACACCAUCGAGAAUGUCAAGGCAAAGAUCCAAGAUAAGGAAGGCAUCCCUCCUGACCAGCAGAGGCUGAUCUUUGCUGGAAAACAGCUGGAAGAUGGGCGCACCCUGUCUGACUAC2000000006AACAUCCAGAAAGAGUCCACCCUGCACCUGGUGCUCCGUCUCAGAGGUGGGAUGCAAAUCUUCGUGAAGACACUCACUGGCAAGACCAUCACCCUUGAGGUCGAGCCCAGUGACACCAUCGAGAACGUCAAAGCAAAGAUCCAGGACAAGGAAGGCAUUCCUCCUGACCAGCAGAGGUUGAUCUUUGCCGGAAAGCAGCUGGAAGAUGGGCGCACCCUGUCUGACUACAACAUCCAGAAAGAGUCUACCCUGCACCUGGUGCUCCGUCUCAGAGGUGGGAUGCAGAUCUUCGUGAAGACCCUGACUGGUAAGACCAUCACUCUCGAAGUGGAGCCGAGUGACACCAUUGAGAAUGUCAAGGCAAAGAUCCAAGACAAGGAAGGCAUCCCUCCUGACCAGCAGAGGUUGAUCUUUGCUGGGAAACAGCUGGAAGAUGG2000000006ACGCACCCUGUCUGACUACAACAUCCAGAAAGAGUCCACCCUGCACCUGGUGCUCCGUCUCAGAGGUGGGAUGCAAAUCUUCGUGAAGACCCUG2000000006ACUGGUAAG2000000006ACCAUCACCCUCGAGGUGGAGCCCAGUGACACCAUCGAGAAUGUCAAGGCAAAGAUCCAAGAUAAGGAAGGCAUCCCUCCUGAUCAGCAGAGGUUGAUCUUUGCUGGGAAACAGCUGGAAGAUGG2000000006ACGCACCCUGUCUGACUACAACAUCCAGAAAGAGUCCACUCUGCACUUGGUCCUGCGCUUGAGGGGGGGUGUCUAAGUUUCCCCUUUUAAGGUUUCAACAAAUUUCAUUGCACUUUCCUUUCAAUAAAGUUGUUGCAUUCCCAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	247	251	271	495	932	1026	1035	1160
Modification Positions	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	12:124914654:-	12:124914650:-	12:124914630:-	12:124913594:-	12:124912017:-	12:124911923:-	12:124911914:-	12:124911789:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	Lny8GcCeVGc9 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL