General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000552720
Gene ID:	ENSG00000050405
Gene Name:	LIMA1
Sequence (UNICHARACTER ENCODING)	CUGGUAGCAGCGCAGAGGAAAGGCGGCUUUUAGCCAGGUAUUUCAGUGUCUGUAGACAAGAUGGAAUCAUCUCCAUUUAAUAGACGGCAAUGGACCUCACUAUCAUUGAGGGUAACAGCCAAAGAACUUUCUCUUGUCAACAAGAACAAGUCAUCGGCUAUUGUGGAAAUAUUCUCCAAGUACCAGAAAGCAGCUGAAGAAACAAACAUGGAGAAGAAGAGAAGUAACACCGAAAAUCUCUCCCAGCACUUUAGAAAGGGGЖCCCUGACUGUGUUAAAGAAGAAGUGGGAGAACCCAGGGCUGGGAGCAGAGUCUCACACAGACUCUCUACGGAACAGCAGCACUGAGAUUAGGCACAGAGCAGACCAUCCUCCUGCUGAAGUGACAAGCCACGCUGCUUCUGGAGCCAAAGCUGACCAAGAAGAACAAAUCCACCCCAGAUCUAGACUCAGGUCACCUCCUGAAGCCCUCGUUCAGGGUCGAUAUCCCCACAUCAAGGЖCGGUGAGGAUCUUAAAGACCACUCAACAGAAAGUAAAAAAAUGGAAAAUUGUCUAGGAGAAUCCAGGCAUGAAGUAGAAAAAUCAGAAAUCAGUGAAAACACAGAUGCUUCGGGCAAAAUAGAGAAAUAUAAUGUUCCGCUGAACAGGCUUAAGAUGAUGUUUGAGAAAGGUGAЖCCAACUCAAACUAAGAUUCUCCGGGCCCAAAGCCGAAGUGCAAGUGGAAGGAAGAUCUCUGAAAACAGCUAUUCUCUAGAUGACCUGGAAAUAGGCCCAGGUCAGUUGUCAUCUUCUACAUUUGACUCGGAGAAAAAUGAGAGUAGACGAAAUCUGGAACUUCCACGCCUCUCAGAAACCUCUAUAAAGGAUCGAAUGGCCAAGUACCAGGCAGCUGUGUCCAAACAAAGCAGCUCAACCAACUAUACAAAUGAGCUGAAAGCCAGUGGUGGCGAAAUCAAAAUUCAUAAAAUGGAGCAAAAGGAGAAUGUGCCCCCAGGUCCUGAGGUCUGCAUCACCCAUCAGGAAGGGGAAAAGAUUUCUGCAAAUGAGAAUAGCCUGGCAGUCCGUUCCACCCCUGCCGAAGAUGACUCCCGUGACUCCCAGGUUAAGAGUGAGGUUCAACAGCCUGUCCAUCCCAAGCCACUAAGUCCAGAUUCCAGAGCCUCCAGUCUUUCUGAAAGUUCUCCUCCCAAAGCAAUGAAGCUUCUGCCUCCUGCUCCUGGUACCUAAUUUCUGCUCCUGCCUUCCACUUUCCUCCUAAUAAGUUUCAGGCACCUGCAAGAGAGACCUGCGUGGAAUGUCAGAAGACAGUCUAUCCAAUGGAGCGUCUCUUGGCCAACCAGCAGGUGUUUCACAUCAGCUGCUUCCGUUGCUCCUAUUGCAACAACAAACUCAGUCUAGGAACAUAUGCAUCUUUACAUGGAAGAAUCUAUUGUAAGCCUCACUUCAAUCAACUCUUUAAAUCUAAGGGCAACUAUGAUGAAGGCUUUGGGCACAGACCACACAAGGAUCUAUGGGCAAGCAAAAAUGAAAACGAAGAGAUUUUGGAGAGACCAGCCCAGCUUGCAAAUGCAAGGGAGЖCCCCUCACAGCCCAGGGGUAGAAGAUGCCCCUAUUGCUAAGGUGGGUGUCCUGGCUGCAAGUAUGGAAGCCAAGGCCUCCUCUCAGCAGGAGAAGGAAGACAAGCCAGCUGAAACCAAGAAGCUGAGGAUCGCCUGGCCACCCCCCACUGAACUUGGAAGUUCAGGAAGUGCCUUGGAGGAAGGGAUCAAAAUGUCAAAGCCCAAAUGGCCUCCUGAAGACGAAAUCAGCAAGCCCGAAGUUCCUGAGGAUGUCGAUCUAGAUCUGAAGAAGCUAAGACGAUCUUCUUCACUGAAGGAAAGAAGCCGCCCAUUCACUGUAGCAGCUUCAUUUCAAAGCACCUCUGUCAAGAGCCCAAAAЖCUGUGUCCCCACCUAUCAGGAAAGGCUGGAGCAUGUCAGAGCAGAGUGAAGAGUCUGUGGGUGGAAGAGUUGCAGAAAGGAAACAAGUGGAAAAUGCCAAGGCUUCUAAGAAGAAUGGGAAUGUGGGAAAAACAACCUGGCAAAACAAAGAAUCUAAAGGAGAGACAGGGAAGAGAAGUAAGGAAGGUCAUAGUUUGGAGAUGGAGAAUGAGAAUCUUGUAGAAAAUGGUGCAGACUCCGAUGAAGAUGAUAACAGCUUCCUCAAACAACAAUCUCCACAAGAACCCAAGUCUCUGAAUUGGUCGAGUUUUGUAGACAACACCUUUGCUGAAGAAUUCACUACUCAGAAUCAGAAAUCCCAGGAUGUGGAЖCUCUGGGAGGGAGAAGUGGUCAAAGAGCUCUCUGUGGAAGAACAGAUAAAGAGAAAUCGGUAUUAUGAUGAGGAUGAGGAUGAAGAGUGACAAAUUGCAAUGAUGCUGGGCCUUAAAUUCAUGUUAGUGUUAGCGAGCCACUGCCCUU
Sequence (SHORT NAMES ENCODING)	CUGGUAGCAGCGCAGAGGAAAGGCGGCUUUUAGCCAGGUAUUUCAGUGUCUGUAGACAAGAUGGAAUCAUCUCCAUUUAAUAGACGGCAAUGGACCUCACUAUCAUUGAGGGUAACAGCCAAAGAACUUUCUCUUGUCAACAAGAACAAGUCAUCGGCUAUUGUGGAAAUAUUCUCCAAGUACCAGAAAGCAGCUGAAGAAACAAACAUGGAGAAGAAGAGAAGUAACACCGAAAAUCUCUCCCAGCACUUUAGAAAGGGGm6ACCCUGACUGUGUUAAAGAAGAAGUGGGAGAACCCAGGGCUGGGAGCAGAGUCUCACACAGACUCUCUACGGAACAGCAGCACUGAGAUUAGGCACAGAGCAGACCAUCCUCCUGCUGAAGUGACAAGCCACGCUGCUUCUGGAGCCAAAGCUGACCAAGAAGAACAAAUCCACCCCAGAUCUAGACUCAGGUCACCUCCUGAAGCCCUCGUUCAGGGUCGAUAUCCCCACAUCAAGGm6ACGGUGAGGAUCUUAAAGACCACUCAACAGAAAGUAAAAAAAUGGAAAAUUGUCUAGGAGAAUCCAGGCAUGAAGUAGAAAAAUCAGAAAUCAGUGAAAACACAGAUGCUUCGGGCAAAAUAGAGAAAUAUAAUGUUCCGCUGAACAGGCUUAAGAUGAUGUUUGAGAAAGGUGAm6ACCAACUCAAACUAAGAUUCUCCGGGCCCAAAGCCGAAGUGCAAGUGGAAGGAAGAUCUCUGAAAACAGCUAUUCUCUAGAUGACCUGGAAAUAGGCCCAGGUCAGUUGUCAUCUUCUACAUUUGACUCGGAGAAAAAUGAGAGUAGACGAAAUCUGGAACUUCCACGCCUCUCAGAAACCUCUAUAAAGGAUCGAAUGGCCAAGUACCAGGCAGCUGUGUCCAAACAAAGCAGCUCAACCAACUAUACAAAUGAGCUGAAAGCCAGUGGUGGCGAAAUCAAAAUUCAUAAAAUGGAGCAAAAGGAGAAUGUGCCCCCAGGUCCUGAGGUCUGCAUCACCCAUCAGGAAGGGGAAAAGAUUUCUGCAAAUGAGAAUAGCCUGGCAGUCCGUUCCACCCCUGCCGAAGAUGACUCCCGUGACUCCCAGGUUAAGAGUGAGGUUCAACAGCCUGUCCAUCCCAAGCCACUAAGUCCAGAUUCCAGAGCCUCCAGUCUUUCUGAAAGUUCUCCUCCCAAAGCAAUGAAGCUUCUGCCUCCUGCUCCUGGUACCUAAUUUCUGCUCCUGCCUUCCACUUUCCUCCUAAUAAGUUUCAGGCACCUGCAAGAGAGACCUGCGUGGAAUGUCAGAAGACAGUCUAUCCAAUGGAGCGUCUCUUGGCCAACCAGCAGGUGUUUCACAUCAGCUGCUUCCGUUGCUCCUAUUGCAACAACAAACUCAGUCUAGGAACAUAUGCAUCUUUACAUGGAAGAAUCUAUUGUAAGCCUCACUUCAAUCAACUCUUUAAAUCUAAGGGCAACUAUGAUGAAGGCUUUGGGCACAGACCACACAAGGAUCUAUGGGCAAGCAAAAAUGAAAACGAAGAGAUUUUGGAGAGACCAGCCCAGCUUGCAAAUGCAAGGGAGm6ACCCCUCACAGCCCAGGGGUAGAAGAUGCCCCUAUUGCUAAGGUGGGUGUCCUGGCUGCAAGUAUGGAAGCCAAGGCCUCCUCUCAGCAGGAGAAGGAAGACAAGCCAGCUGAAACCAAGAAGCUGAGGAUCGCCUGGCCACCCCCCACUGAACUUGGAAGUUCAGGAAGUGCCUUGGAGGAAGGGAUCAAAAUGUCAAAGCCCAAAUGGCCUCCUGAAGACGAAAUCAGCAAGCCCGAAGUUCCUGAGGAUGUCGAUCUAGAUCUGAAGAAGCUAAGACGAUCUUCUUCACUGAAGGAAAGAAGCCGCCCAUUCACUGUAGCAGCUUCAUUUCAAAGCACCUCUGUCAAGAGCCCAAAAm6ACUGUGUCCCCACCUAUCAGGAAAGGCUGGAGCAUGUCAGAGCAGAGUGAAGAGUCUGUGGGUGGAAGAGUUGCAGAAAGGAAACAAGUGGAAAAUGCCAAGGCUUCUAAGAAGAAUGGGAAUGUGGGAAAAACAACCUGGCAAAACAAAGAAUCUAAAGGAGAGACAGGGAAGAGAAGUAAGGAAGGUCAUAGUUUGGAGAUGGAGAAUGAGAAUCUUGUAGAAAAUGGUGCAGACUCCGAUGAAGAUGAUAACAGCUUCCUCAAACAACAAUCUCCACAAGAACCCAAGUCUCUGAAUUGGUCGAGUUUUGUAGACAACACCUUUGCUGAAGAAUUCACUACUCAGAAUCAGAAAUCCCAGGAUGUGGAm6ACUCUGGGAGGGAGAAGUGGUCAAAGAGCUCUCUGUGGAAGAACAGAUAAAGAGAAAUCGGUAUUAUGAUGAGGAUGAGGAUGAAGAGUGACAAAUUGCAAUGAUGCUGGGCCUUAAAUUCAUGUUAGUGUUAGCGAGCCACUGCCCUU
Sequence (MODOMICS CODE ENCODING)	CUGGUAGCAGCGCAGAGGAAAGGCGGCUUUUAGCCAGGUAUUUCAGUGUCUGUAGACAAGAUGGAAUCAUCUCCAUUUAAUAGACGGCAAUGGACCUCACUAUCAUUGAGGGUAACAGCCAAAGAACUUUCUCUUGUCAACAAGAACAAGUCAUCGGCUAUUGUGGAAAUAUUCUCCAAGUACCAGAAAGCAGCUGAAGAAACAAACAUGGAGAAGAAGAGAAGUAACACCGAAAAUCUCUCCCAGCACUUUAGAAAGGGG2000000006ACCCUGACUGUGUUAAAGAAGAAGUGGGAGAACCCAGGGCUGGGAGCAGAGUCUCACACAGACUCUCUACGGAACAGCAGCACUGAGAUUAGGCACAGAGCAGACCAUCCUCCUGCUGAAGUGACAAGCCACGCUGCUUCUGGAGCCAAAGCUGACCAAGAAGAACAAAUCCACCCCAGAUCUAGACUCAGGUCACCUCCUGAAGCCCUCGUUCAGGGUCGAUAUCCCCACAUCAAGG2000000006ACGGUGAGGAUCUUAAAGACCACUCAACAGAAAGUAAAAAAAUGGAAAAUUGUCUAGGAGAAUCCAGGCAUGAAGUAGAAAAAUCAGAAAUCAGUGAAAACACAGAUGCUUCGGGCAAAAUAGAGAAAUAUAAUGUUCCGCUGAACAGGCUUAAGAUGAUGUUUGAGAAAGGUGA2000000006ACCAACUCAAACUAAGAUUCUCCGGGCCCAAAGCCGAAGUGCAAGUGGAAGGAAGAUCUCUGAAAACAGCUAUUCUCUAGAUGACCUGGAAAUAGGCCCAGGUCAGUUGUCAUCUUCUACAUUUGACUCGGAGAAAAAUGAGAGUAGACGAAAUCUGGAACUUCCACGCCUCUCAGAAACCUCUAUAAAGGAUCGAAUGGCCAAGUACCAGGCAGCUGUGUCCAAACAAAGCAGCUCAACCAACUAUACAAAUGAGCUGAAAGCCAGUGGUGGCGAAAUCAAAAUUCAUAAAAUGGAGCAAAAGGAGAAUGUGCCCCCAGGUCCUGAGGUCUGCAUCACCCAUCAGGAAGGGGAAAAGAUUUCUGCAAAUGAGAAUAGCCUGGCAGUCCGUUCCACCCCUGCCGAAGAUGACUCCCGUGACUCCCAGGUUAAGAGUGAGGUUCAACAGCCUGUCCAUCCCAAGCCACUAAGUCCAGAUUCCAGAGCCUCCAGUCUUUCUGAAAGUUCUCCUCCCAAAGCAAUGAAGCUUCUGCCUCCUGCUCCUGGUACCUAAUUUCUGCUCCUGCCUUCCACUUUCCUCCUAAUAAGUUUCAGGCACCUGCAAGAGAGACCUGCGUGGAAUGUCAGAAGACAGUCUAUCCAAUGGAGCGUCUCUUGGCCAACCAGCAGGUGUUUCACAUCAGCUGCUUCCGUUGCUCCUAUUGCAACAACAAACUCAGUCUAGGAACAUAUGCAUCUUUACAUGGAAGAAUCUAUUGUAAGCCUCACUUCAAUCAACUCUUUAAAUCUAAGGGCAACUAUGAUGAAGGCUUUGGGCACAGACCACACAAGGAUCUAUGGGCAAGCAAAAAUGAAAACGAAGAGAUUUUGGAGAGACCAGCCCAGCUUGCAAAUGCAAGGGAG2000000006ACCCCUCACAGCCCAGGGGUAGAAGAUGCCCCUAUUGCUAAGGUGGGUGUCCUGGCUGCAAGUAUGGAAGCCAAGGCCUCCUCUCAGCAGGAGAAGGAAGACAAGCCAGCUGAAACCAAGAAGCUGAGGAUCGCCUGGCCACCCCCCACUGAACUUGGAAGUUCAGGAAGUGCCUUGGAGGAAGGGAUCAAAAUGUCAAAGCCCAAAUGGCCUCCUGAAGACGAAAUCAGCAAGCCCGAAGUUCCUGAGGAUGUCGAUCUAGAUCUGAAGAAGCUAAGACGAUCUUCUUCACUGAAGGAAAGAAGCCGCCCAUUCACUGUAGCAGCUUCAUUUCAAAGCACCUCUGUCAAGAGCCCAAAA2000000006ACUGUGUCCCCACCUAUCAGGAAAGGCUGGAGCAUGUCAGAGCAGAGUGAAGAGUCUGUGGGUGGAAGAGUUGCAGAAAGGAAACAAGUGGAAAAUGCCAAGGCUUCUAAGAAGAAUGGGAAUGUGGGAAAAACAACCUGGCAAAACAAAGAAUCUAAAGGAGAGACAGGGAAGAGAAGUAAGGAAGGUCAUAGUUUGGAGAUGGAGAAUGAGAAUCUUGUAGAAAAUGGUGCAGACUCCGAUGAAGAUGAUAACAGCUUCCUCAAACAACAAUCUCCACAAGAACCCAAGUCUCUGAAUUGGUCGAGUUUUGUAGACAACACCUUUGCUGAAGAAUUCACUACUCAGAAUCAGAAAUCCCAGGAUGUGGA2000000006ACUCUGGGAGGGAGAAGUGGUCAAAGAGCUCUCUGUGGAAGAACAGAUAAAGAGAAAUCGGUAUUAUGAUGAGGAUGAGGAUGAAGAGUGACAAAUUGCAAUGAUGCUGGGCCUUAAAUUCAUGUUAGUGUUAGCGAGCCACUGCCCUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	262	500	675	1578	1938	2309
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	12:50222449:-	12:50222211:-	12:50222036:-	12:50177885:-	12:50177525:-	12:50177154:-
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML	93arJtwJmuS9 BkoLW2CBToyL	BtsJQJ3DteUq dknfVe6BK8aP	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ S9vNeQQYrhac Yfn77uLS5tv8